RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 CLRN2A0PK11 232 aa21.41■■□□□ 1.02
YBX3-201ENST00000228251 RAD21O60216 631 aa21.41■■□□□ 1.02
YBX3-201ENST00000228251 TBC1D12O60347 775 aa21.41■■□□□ 1.02
YBX3-201ENST00000228251 SREBF1P36956 1147 aa21.41■■□□□ 1.02
YBX3-201ENST00000228251 SNAP25P60880 206 aa21.41■■□□□ 1.02
YBX3-201ENST00000228251 ARHGAP4P98171 946 aa21.41■■□□□ 1.02
YBX3-201ENST00000228251 DLGAP5Q15398 846 aa21.41■■□□□ 1.02
YBX3-201ENST00000228251 TEX2Q8IWB9 1127 aa21.41■■□□□ 1.02
YBX3-201ENST00000228251 CSGALNACT2Q8N6G5 542 aa21.41■■□□□ 1.02
YBX3-201ENST00000228251 SLC16A10Q8TF71 515 aa21.41■■□□□ 1.02
YBX3-201ENST00000228251 ABHD10Q9NUJ1 306 aa21.41■■□□□ 1.02
YBX3-201ENST00000228251 HDAC9Q9UKV0 1011 aa21.41■■□□□ 1.02
YBX3-201ENST00000228251 RBBP6Q7Z6E9 1792 aaKnown RBP21.4■■□□□ 1.02
YBX3-201ENST00000228251 KDM3AQ9Y4C1 1321 aa21.4■■□□□ 1.02
YBX3-201ENST00000228251 ECE1P42892 770 aa21.4■■□□□ 1.02
YBX3-201ENST00000228251 UBXN1Q04323 297 aa21.4■■□□□ 1.02
YBX3-201ENST00000228251 Q4G0T1 1027 aa21.4■■□□□ 1.02
YBX3-201ENST00000228251 GUF1Q8N442 669 aaKnown RBP21.4■■□□□ 1.02
YBX3-201ENST00000228251 CPLX3Q8WVH0 158 aa21.4■■□□□ 1.02
YBX3-201ENST00000228251 MRPL44Q9H9J2 332 aaKnown RBP21.4■■□□□ 1.02
YBX3-201ENST00000228251 PRR12Q9ULL5 1215 aa21.4■■□□□ 1.02
YBX3-201ENST00000228251 PIK3CDO00329 1044 aa21.39■■□□□ 1.01
YBX3-201ENST00000228251 TBX3O15119 743 aa21.39■■□□□ 1.01
YBX3-201ENST00000228251 FOSP01100 380 aaPredicted RBP21.39■■□□□ 1.01
YBX3-201ENST00000228251 CIITAP33076 1130 aa21.39■■□□□ 1.01
YBX3-201ENST00000228251 ERVK-24P63145 666 aa21.39■■□□□ 1.01
YBX3-201ENST00000228251 MAP3K10Q02779 954 aa21.39■■□□□ 1.01
YBX3-201ENST00000228251 NAA30Q147X3 362 aaPredicted RBP21.39■■□□□ 1.01
YBX3-201ENST00000228251 AGBL3Q8NEM8 1001 aa21.39■■□□□ 1.01
YBX3-201ENST00000228251 ACER1Q8TDN7 264 aa21.39■■□□□ 1.01
YBX3-201ENST00000228251 ERO1AQ96HE7 468 aa21.39■■□□□ 1.01
YBX3-201ENST00000228251 DESI2Q9BSY9 194 aa21.39■■□□□ 1.01
YBX3-201ENST00000228251 LRRC27Q9C0I9 530 aa21.39■■□□□ 1.01
YBX3-201ENST00000228251 ZBTB21Q9ULJ3 1066 aa21.39■■□□□ 1.01
YBX3-201ENST00000228251 ZBTB12Q9Y330 459 aaPredicted RBP21.39■■□□□ 1.01
YBX3-201ENST00000228251 SLU7O95391 586 aaKnown RBP21.38■■□□□ 1.01
YBX3-201ENST00000228251 MIIPQ5JXC2 388 aa21.38■■□□□ 1.01
YBX3-201ENST00000228251 FAM83AQ86UY5 434 aa21.38■■□□□ 1.01
YBX3-201ENST00000228251 DDX12PQ92771 950 aa21.38■■□□□ 1.01
YBX3-201ENST00000228251 TTYH3Q9C0H2 523 aa21.38■■□□□ 1.01
YBX3-201ENST00000228251 NT5C3AQ9H0P0 336 aa21.38■■□□□ 1.01
YBX3-201ENST00000228251 SLC39A2Q9NP94 309 aa21.38■■□□□ 1.01
YBX3-201ENST00000228251 DNAI1Q9UI46 699 aa21.38■■□□□ 1.01
YBX3-201ENST00000228251 ZNRF3Q9ULT6 936 aa21.38■■□□□ 1.01
YBX3-201ENST00000228251 CCDC175P0C221 793 aa21.38■■□□□ 1.01
YBX3-201ENST00000228251 DNM2P50570 870 aa21.38■■□□□ 1.01
YBX3-201ENST00000228251 PSMD2Q13200 908 aa21.38■■□□□ 1.01
YBX3-201ENST00000228251 CDAN1Q8IWY9 1227 aa21.38■■□□□ 1.01
YBX3-201ENST00000228251 SLFN12Q8IYM2 578 aa21.38■■□□□ 1.01
YBX3-201ENST00000228251 CNOT6LQ96LI5 555 aaKnown RBP21.38■■□□□ 1.01
YBX3-201ENST00000228251 TUBGCP2Q9BSJ2 902 aa21.38■■□□□ 1.01
YBX3-201ENST00000228251 ARHGEF10LQ9HCE6 1279 aa21.38■■□□□ 1.01
YBX3-201ENST00000228251 RASSF10A6NK89 507 aa21.37■■□□□ 1.01
YBX3-201ENST00000228251 TAL1P17542 331 aaPredicted RBP21.37■■□□□ 1.01
YBX3-201ENST00000228251 DYMQ7RTS9 669 aa21.37■■□□□ 1.01
YBX3-201ENST00000228251 DEFB132Q7Z7B7 95 aa21.37■■□□□ 1.01
YBX3-201ENST00000228251 TMTC1Q8IUR5 882 aa21.37■■□□□ 1.01
YBX3-201ENST00000228251 KIFC2Q96AC6 838 aa21.37■■□□□ 1.01
YBX3-201ENST00000228251 DNAJC7Q99615 494 aa21.37■■□□□ 1.01
YBX3-201ENST00000228251 TTC26A0AVF1 554 aa21.36■■□□□ 1.01
YBX3-201ENST00000228251 NKRFO15226 690 aaKnown RBP eCLIP21.36■■□□□ 1.01
YBX3-201ENST00000228251 PLA2G6O60733 806 aa21.36■■□□□ 1.01
YBX3-201ENST00000228251 CYP3A4P08684 503 aa21.36■■□□□ 1.01
YBX3-201ENST00000228251 TPM1P09493 284 aa21.36■■□□□ 1.01
YBX3-201ENST00000228251 BAG6P46379 1132 aa21.36■■□□□ 1.01
YBX3-201ENST00000228251 USH1GQ495M9 461 aa21.36■■□□□ 1.01
YBX3-201ENST00000228251 FAM114A1Q8IWE2 563 aa21.36■■□□□ 1.01
YBX3-201ENST00000228251 OGFOD1Q8N543 542 aa21.36■■□□□ 1.01
YBX3-201ENST00000228251 WDR24Q96S15 920 aa21.36■■□□□ 1.01
YBX3-201ENST00000228251 MAGEC2Q9UBF1 373 aaPredicted RBP21.36■■□□□ 1.01
YBX3-201ENST00000228251 CAPN11Q9UMQ6 739 aa21.36■■□□□ 1.01
YBX3-201ENST00000228251 ABCB11O95342 1321 aa21.36■■□□□ 1.01
YBX3-201ENST00000228251 FAM86B1E9PN63 330 aa21.36■■□□□ 1.01
YBX3-201ENST00000228251 FAM86B2P0C5J1 330 aa21.36■■□□□ 1.01
YBX3-201ENST00000228251 STAT2P52630 851 aa21.36■■□□□ 1.01
YBX3-201ENST00000228251 SPICE1Q8N0Z3 855 aa21.36■■□□□ 1.01
YBX3-201ENST00000228251 MED24O75448 989 aa21.35■■□□□ 1.01
YBX3-201ENST00000228251 KRT9P35527 623 aa21.35■■□□□ 1.01
YBX3-201ENST00000228251 LRRC63Q05C16 580 aa21.35■■□□□ 1.01
YBX3-201ENST00000228251 COASYQ13057 564 aa21.35■■□□□ 1.01
YBX3-201ENST00000228251 ZCWPW2Q504Y3 356 aa21.35■■□□□ 1.01
YBX3-201ENST00000228251 LRRC55Q6ZSA7 311 aa21.35■■□□□ 1.01
YBX3-201ENST00000228251 ERGIC2Q96RQ1 377 aa21.35■■□□□ 1.01
YBX3-201ENST00000228251 TMEM39BQ9GZU3 492 aa21.35■■□□□ 1.01
YBX3-201ENST00000228251 RANBP17Q9H2T7 1088 aaKnown RBP21.35■■□□□ 1.01
YBX3-201ENST00000228251 PCDHA2Q9Y5H9 948 aa21.35■■□□□ 1.01
YBX3-201ENST00000228251 POTEB3A0JP26 581 aa21.34■■□□□ 1.01
YBX3-201ENST00000228251 FRMD3A2A2Y4 597 aa21.34■■□□□ 1.01
YBX3-201ENST00000228251 POTECB2RU33 542 aa21.34■■□□□ 1.01
YBX3-201ENST00000228251 B4DLN1 442 aa21.34■■□□□ 1.01
YBX3-201ENST00000228251 CXCL9Q07325 125 aa21.34■■□□□ 1.01
YBX3-201ENST00000228251 POTEBQ6S5H4 581 aa21.34■■□□□ 1.01
YBX3-201ENST00000228251 CYP26C1Q6V0L0 522 aa21.34■■□□□ 1.01
YBX3-201ENST00000228251 LRRN4CLQ8ND94 238 aa21.34■■□□□ 1.01
YBX3-201ENST00000228251 GLIS3Q8NEA6 775 aa21.34■■□□□ 1.01
YBX3-201ENST00000228251 GOPCQ9HD26 462 aa21.34■■□□□ 1.01
YBX3-201ENST00000228251 A0A0U1RQJ8 604 aa21.33■■□□□ 1.01
YBX3-201ENST00000228251 E9PMD0 336 aa21.33■■□□□ 1.01
YBX3-201ENST00000228251 MARCH6O60337 910 aa21.33■■□□□ 1.01
YBX3-201ENST00000228251 STAT3P40763 770 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms