RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 EMBQ6PCB8 327 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 RAD9BQ6WBX8 426 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 RBM43Q6ZSC3 357 aaKnown RBP12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 MIGA2Q7L4E1 593 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 TMC4Q7Z404 712 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 KSR1Q8IVT5 923 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 SNX29Q8TEQ0 813 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 GDAQ9Y2T3 454 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 ADGRB2O60241 1585 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 SH2B2O14492 632 aaPredicted RBP12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 FMNL1O95466 1100 aaPredicted RBP12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 EEF1GP26641 437 aaKnown RBP12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 ARID4AP29374 1257 aaPredicted RBP12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 INF2Q27J81 1249 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 GSTA5Q7RTV2 222 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 CXorf56Q9H5V9 222 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 ZSWIM5Q9P217 1185 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 H3BQF6 201 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 FLOT1O75955 427 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 YY1P25490 414 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 POLR2FP61218 127 aaKnown RBP12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 FMR1Q06787 632 aaKnown RBP eCLIP12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 C3orf67Q6ZVT6 689 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 CCDC197Q8NCU1 140 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 ERMNQ8TAM6 284 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 LSM14BQ9BX40 385 aaKnown RBP12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 IKBKGQ9Y6K9 419 aa12.67□□□□□ -0.38
DNMT3B-201ENST00000201963 ESYT3A0FGR9 886 aa12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 SPOPO43791 374 aa12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 ONECUT3O60422 494 aaPredicted RBP12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 ZBED6P86452 979 aa12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 PPARAQ07869 468 aa12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 CCDC38Q502W7 563 aa12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 TAOK1Q7L7X3 1001 aa12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 ARHGEF2Q92974 986 aaKnown RBP12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 EIF4A3P38919 411 aaKnown RBP12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 TSNAXIP1Q2TAA8 658 aa12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 TCP11X2Q5H9J9 407 aa12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 SEL1L2Q5TEA6 688 aa12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 MED23Q9ULK4 1368 aa12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 ATP1A1P05023 1023 aaKnown RBP12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 BTDP43251 543 aa12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 CORO7P57737 925 aa12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 PLCB3Q01970 1234 aa12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 STXBP4Q6ZWJ1 553 aa12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 SPATS2LQ9NUQ6 558 aaKnown RBP12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 NOVA2Q9UNW9 492 aaKnown RBP12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 CD2APQ9Y5K6 639 aa12.66□□□□□ -0.38
DNMT3B-201ENST00000201963 ABCB4P21439 1286 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 NONOQ15233 471 aaKnown RBP eCLIP12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 HS2ST1Q7LGA3 356 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 STMN2Q93045 179 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 PNKPQ96T60 521 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 TDRD3Q9H7E2 651 aaKnown RBP12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 CD209Q9NNX6 404 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 HOMER2Q9NSB8 354 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 ASIC3Q9UHC3 531 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 RWDD2AQ9UIY3 292 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 CSADQ9Y600 493 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 PIK3C2AO00443 1686 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 TTC26A0AVF1 554 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 TNFAIP3P21580 790 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 GBP1P32455 592 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 ZNF658Q5TYW1 1059 aaPredicted RBP12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 CCDC105Q8IYK2 499 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 TBC1D16Q8TBP0 767 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 MMS19Q96T76 1030 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 CHP1Q99653 195 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 LCMT1Q9UIC8 334 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 SRGNP10124 158 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 FXR1P51114 621 aaKnown RBP eCLIP12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 BLIDQ8IZY5 108 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 SH2D3CQ8N5H7 860 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 RASGRP4Q8TDF6 673 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 GPKOWQ92917 476 aaPredicted RBP eCLIP12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 IQCGQ9H095 443 aaKnown RBP12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 RAB17Q9H0T7 212 aa12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 INTS9Q9NV88 658 aaKnown RBP12.65□□□□□ -0.38
DNMT3B-201ENST00000201963 USP17L12C9JPN9 530 aa12.65□□□□□ -0.39
DNMT3B-201ENST00000201963 USP17L21D6R901 530 aa12.65□□□□□ -0.39
DNMT3B-201ENST00000201963 SASH3O75995 380 aa12.65□□□□□ -0.39
DNMT3B-201ENST00000201963 DDNO94850 711 aaPredicted RBP12.65□□□□□ -0.39
DNMT3B-201ENST00000201963 PRDX5P30044 214 aa12.65□□□□□ -0.39
DNMT3B-201ENST00000201963 ZNF131P52739 623 aa12.65□□□□□ -0.39
DNMT3B-201ENST00000201963 FAM133BQ5BKY9 247 aaKnown RBP12.65□□□□□ -0.39
DNMT3B-201ENST00000201963 BEND6Q5SZJ8 279 aaPredicted RBP12.65□□□□□ -0.39
DNMT3B-201ENST00000201963 IQCDQ96DY2 449 aa12.65□□□□□ -0.39
DNMT3B-201ENST00000201963 NUCKS1Q9H1E3 243 aaKnown RBP12.65□□□□□ -0.39
DNMT3B-201ENST00000201963 ATP8A1Q9Y2Q0 1164 aa12.65□□□□□ -0.39
DNMT3B-201ENST00000201963 TECP42680 631 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 TNFAIP1Q13829 316 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 SP8Q8IXZ3 490 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 MB21D1Q8N884 522 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 HOMER3Q9NSC5 361 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 CTTNBP2NLQ9P2B4 639 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 TRIM49BA6NDI0 452 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 CTDNEP1O95476 244 aa12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 EEF2P13639 858 aaKnown RBP12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 RPL13P26373 211 aaKnown RBP12.64□□□□□ -0.39
DNMT3B-201ENST00000201963 STX2P32856 288 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms