RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 FAM26FQ5R3K3 315 aa18.89■□□□□ 0.62
PTPN18-201ENST00000175756 CLEC10AQ8IUN9 316 aa18.89■□□□□ 0.62
PTPN18-201ENST00000175756 SELENOSQ9BQE4 189 aa18.89■□□□□ 0.62
PTPN18-201ENST00000175756 KIAA1024Q9UPX6 916 aa18.89■□□□□ 0.62
PTPN18-201ENST00000175756 KCNQ2O43526 872 aa18.89■□□□□ 0.61
PTPN18-201ENST00000175756 ABCB4P21439 1286 aa18.89■□□□□ 0.61
PTPN18-201ENST00000175756 CTNNA1P35221 906 aaKnown RBP18.89■□□□□ 0.61
PTPN18-201ENST00000175756 FUT2Q10981 343 aa18.89■□□□□ 0.61
PTPN18-201ENST00000175756 ANKRD2Q9GZV1 360 aa18.89■□□□□ 0.61
PTPN18-201ENST00000175756 LMO7Q8WWI1 1683 aa18.89■□□□□ 0.61
PTPN18-201ENST00000175756 PCP11498 1178 aaKnown RBP18.89■□□□□ 0.61
PTPN18-201ENST00000175756 KRT13P13646 458 aa18.89■□□□□ 0.61
PTPN18-201ENST00000175756 GIMAP7Q8NHV1 300 aa18.89■□□□□ 0.61
PTPN18-201ENST00000175756 RPGRQ92834 1020 aaKnown RBP18.89■□□□□ 0.61
PTPN18-201ENST00000175756 DUSP9Q99956 384 aaKnown RBP18.89■□□□□ 0.61
PTPN18-201ENST00000175756 BSDC1Q9NW68 430 aaPredicted RBP18.89■□□□□ 0.61
PTPN18-201ENST00000175756 PCDHA12Q9UN75 941 aa18.89■□□□□ 0.61
PTPN18-201ENST00000175756 PCDHB13Q9Y5F0 798 aa18.89■□□□□ 0.61
PTPN18-201ENST00000175756 GSTO1P78417 241 aa18.88■□□□□ 0.61
PTPN18-201ENST00000175756 FAM182BQ5T319 152 aa18.88■□□□□ 0.61
PTPN18-201ENST00000175756 PAPD7Q5XG87 772 aaKnown RBP18.88■□□□□ 0.61
PTPN18-201ENST00000175756 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.88■□□□□ 0.61
PTPN18-201ENST00000175756 CCDC65Q8IXS2 484 aa18.88■□□□□ 0.61
PTPN18-201ENST00000175756 ARHGAP20Q9P2F6 1191 aa18.88■□□□□ 0.61
PTPN18-201ENST00000175756 SEC24CP53992 1094 aa18.88■□□□□ 0.61
PTPN18-201ENST00000175756 ADAM9Q13443 819 aa18.88■□□□□ 0.61
PTPN18-201ENST00000175756 KCNB1Q14721 858 aa18.88■□□□□ 0.61
PTPN18-201ENST00000175756 NAALADL2Q58DX5 795 aa18.88■□□□□ 0.61
PTPN18-201ENST00000175756 TXNRD3Q86VQ6 643 aa18.88■□□□□ 0.61
PTPN18-201ENST00000175756 GPBP1Q86WP2 473 aa18.88■□□□□ 0.61
PTPN18-201ENST00000175756 DGKHQ86XP1 1220 aa18.88■□□□□ 0.61
PTPN18-201ENST00000175756 GCOM1H8Y6P7 765 aaPredicted RBP18.88■□□□□ 0.61
PTPN18-201ENST00000175756 CETN3O15182 167 aa18.88■□□□□ 0.61
PTPN18-201ENST00000175756 EPHB6O15197 1021 aa18.88■□□□□ 0.61
PTPN18-201ENST00000175756 MYZAPP0CAP1 466 aa18.88■□□□□ 0.61
PTPN18-201ENST00000175756 PPP1R2P41236 205 aa18.88■□□□□ 0.61
PTPN18-201ENST00000175756 ZFYVE27Q5T4F4 411 aa18.88■□□□□ 0.61
PTPN18-201ENST00000175756 BARHL2Q9NY43 387 aa18.88■□□□□ 0.61
PTPN18-201ENST00000175756 ABCC6O95255 1503 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 MYMKA6NI61 221 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 KRT71Q3SY84 523 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 VIPAS39Q9H9C1 493 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 EFCC1Q9HA90 598 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 MEIS1O00470 390 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 BTDP43251 543 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 CORO7P57737 925 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 PEX26Q7Z412 305 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 DYDC1Q8WWB3 177 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 CABS1Q96KC9 395 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 LRRC27Q9C0I9 530 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 SH2D4AQ9H788 454 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 ANAPC4Q9UJX5 808 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 TARSL2A2RTX5 802 aaKnown RBP18.87■□□□□ 0.61
PTPN18-201ENST00000175756 USP17L5A8MUK1 530 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 DAAM2Q86T65 1068 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 OR2W6PQ8NHA6 318 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 CCSER1Q9C0I3 900 aa18.87■□□□□ 0.61
PTPN18-201ENST00000175756 CRYBG1Q9Y4K1 1723 aa18.86■□□□□ 0.61
PTPN18-201ENST00000175756 UFL1O94874 794 aa18.86■□□□□ 0.61
PTPN18-201ENST00000175756 FKBP3Q00688 224 aaKnown RBP18.86■□□□□ 0.61
PTPN18-201ENST00000175756 CYP4A11Q02928 519 aa18.86■□□□□ 0.61
PTPN18-201ENST00000175756 CCDC25Q86WR0 208 aa18.86■□□□□ 0.61
PTPN18-201ENST00000175756 AK8Q96MA6 479 aa18.86■□□□□ 0.61
PTPN18-201ENST00000175756 ZIM3Q96PE6 472 aa18.86■□□□□ 0.61
PTPN18-201ENST00000175756 ZNF335Q9H4Z2 1342 aaPredicted RBP18.86■□□□□ 0.61
PTPN18-201ENST00000175756 KRIT1O00522 736 aa18.86■□□□□ 0.61
PTPN18-201ENST00000175756 ORC4O43929 436 aa18.86■□□□□ 0.61
PTPN18-201ENST00000175756 CAMTA2O94983 1202 aa18.86■□□□□ 0.61
PTPN18-201ENST00000175756 NR1D1P20393 614 aa18.86■□□□□ 0.61
PTPN18-201ENST00000175756 RDH13Q8NBN7 331 aa18.86■□□□□ 0.61
PTPN18-201ENST00000175756 WDR66Q8TBY9 1149 aa18.86■□□□□ 0.61
PTPN18-201ENST00000175756 UBXN6Q9BZV1 441 aa18.86■□□□□ 0.61
PTPN18-201ENST00000175756 NTSR2O95665 410 aa18.86■□□□□ 0.61
PTPN18-201ENST00000175756 FAM83BQ5T0W9 1011 aa18.86■□□□□ 0.61
PTPN18-201ENST00000175756 DDX42Q86XP3 938 aaKnown RBP eCLIP18.86■□□□□ 0.61
PTPN18-201ENST00000175756 SEMA6BQ9H3T3 888 aa18.86■□□□□ 0.61
PTPN18-201ENST00000175756 RFC4P35249 363 aa18.85■□□□□ 0.61
PTPN18-201ENST00000175756 ZNF804AQ7Z570 1209 aa18.85■□□□□ 0.61
PTPN18-201ENST00000175756 U2AF1L4Q8WU68 220 aaKnown RBP18.85■□□□□ 0.61
PTPN18-201ENST00000175756 COL4A3BPQ9Y5P4 624 aa18.85■□□□□ 0.61
PTPN18-201ENST00000175756 ITPK1Q13572 414 aa18.85■□□□□ 0.61
PTPN18-201ENST00000175756 EMBQ6PCB8 327 aa18.85■□□□□ 0.61
PTPN18-201ENST00000175756 GLIS3Q8NEA6 775 aa18.85■□□□□ 0.61
PTPN18-201ENST00000175756 TMX4Q9H1E5 349 aaPredicted RBP18.85■□□□□ 0.61
PTPN18-201ENST00000175756 CUEDC2Q9H467 287 aa18.85■□□□□ 0.61
PTPN18-201ENST00000175756 KBTBD4Q9NVX7 518 aa18.85■□□□□ 0.61
PTPN18-201ENST00000175756 E9PMD0 336 aa18.85■□□□□ 0.61
PTPN18-201ENST00000175756 TSEN2Q8NCE0 465 aaKnown RBP18.85■□□□□ 0.61
PTPN18-201ENST00000175756 DDX25Q9UHL0 483 aaKnown RBP18.85■□□□□ 0.61
PTPN18-201ENST00000175756 NPHP3-ACAD11A0A0J9YXS1 232 aa18.84■□□□□ 0.61
PTPN18-201ENST00000175756 TBCAO75347 108 aaKnown RBP18.84■□□□□ 0.61
PTPN18-201ENST00000175756 NPY5RQ15761 445 aa18.84■□□□□ 0.61
PTPN18-201ENST00000175756 GBP6Q6ZN66 633 aa18.84■□□□□ 0.61
PTPN18-201ENST00000175756 JPH2Q9BR39 696 aaPredicted RBP18.84■□□□□ 0.61
PTPN18-201ENST00000175756 ZNF219Q9P2Y4 722 aaPredicted RBP18.84■□□□□ 0.61
PTPN18-201ENST00000175756 PLAAQ9Y263 795 aa18.84■□□□□ 0.61
PTPN18-201ENST00000175756 STXBP3O00186 592 aa18.84■□□□□ 0.61
PTPN18-201ENST00000175756 LAD1O00515 517 aa18.84■□□□□ 0.61
PTPN18-201ENST00000175756 CHMP2AO43633 222 aa18.84■□□□□ 0.61
PTPN18-201ENST00000175756 MYL1P05976 194 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms