RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Kcnv2Q8CFS6 562 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 DnerQ8JZM4 737 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 DaglbQ91WC9 669 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Nxf1Q99JX7 618 aaKnown RBP9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Serpinb3bQ9D1Q5 387 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Zcchc17Q9ESX4 241 aaKnown RBP9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Ngly1Q9JI78 651 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Vav3Q9R0C8 847 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Mx2Q9WVP9 655 aa9.76□□□□□ -0.85
Trim39-201ENSMUST00000042717 Spocd1B1ASB6 936 aa9.75□□□□□ -0.85
Trim39-201ENSMUST00000042717 Slc4a9E9PUP3 929 aa9.75□□□□□ -0.85
Trim39-201ENSMUST00000042717 Cxcl9P18340 126 aa9.75□□□□□ -0.85
Trim39-201ENSMUST00000042717 Psmc2P46471 433 aa9.75□□□□□ -0.85
Trim39-201ENSMUST00000042717 Lca5lQ8C0X0 741 aa9.75□□□□□ -0.85
Trim39-201ENSMUST00000042717 Rbm10Q99KG3 930 aaKnown RBP9.75□□□□□ -0.85
Trim39-201ENSMUST00000042717 Nap1l5Q9JJF0 156 aa9.75□□□□□ -0.85
Trim39-201ENSMUST00000042717 Rfpl4bJ3QPR6 266 aa9.75□□□□□ -0.85
Trim39-201ENSMUST00000042717 Ano10Q8BH79 659 aa9.75□□□□□ -0.85
Trim39-201ENSMUST00000042717 Senp7Q8BUH8 1037 aa9.75□□□□□ -0.85
Trim39-201ENSMUST00000042717 Mov10l1Q99MV5 1187 aa9.75□□□□□ -0.85
Trim39-201ENSMUST00000042717 Armc3A2AU72 881 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Vmn2r71L7N2D8 855 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Itgb5O70309 798 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 NefhP19246 1090 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Psmc6P62334 389 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Neurl1bQ0MW30 546 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Nlgn2Q69ZK9 836 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Aggf1Q7TN31 711 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 IrgqQ8VIM9 583 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Kremen1Q99N43 473 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Git2Q9JLQ2 708 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Pcdh15Q99PJ1 1943 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Gm5737A0A140LI11 423 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Ugt1a6bK9J7B2 531 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Cfap157Q0VFX2 523 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Ugt1a6Q64435 531 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Krt9Q6RHW0 743 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Ugt1a7cQ6ZQM8 531 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Thap3Q8BJ25 218 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Dennd2aQ8C4S8 1000 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Bcas3Q8CCN5 928 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Kcnk13Q8R1P5 405 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Stard7Q8R1R3 373 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Kcnh7Q9ER47 1195 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Extl2Q9ES89 330 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Gm3095E9Q058 166 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Ssrp1Q08943 708 aaKnown RBP9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Skap1Q3UUV5 355 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Pnma5Q5DTT8 618 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Kif5bQ61768 963 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Antxr2Q6DFX2 487 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Ano6Q6P9J9 911 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Trim9Q8C7M3 817 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Ildr1Q8CBR1 537 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Ankrd1Q9CR42 319 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 Prl2c5Q9JLV9 222 aa9.74□□□□□ -0.85
Trim39-201ENSMUST00000042717 YdjcQ14BV6 310 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Gm10392Q3V3I3 114 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Dph1Q5NCQ5 438 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Trak2Q6P9N8 913 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Slc4a7Q8BTY2 1034 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Podxl2Q8CAE9 603 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Ces4aQ8R0W5 563 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Slc25a38Q91XD8 326 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Nrbp1Q99J45 535 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Ccdc105Q9D4K7 499 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Q9D5Q8 446 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Tmx2Q9D710 295 aaKnown RBP9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Ddx23D3Z0M9 819 aaKnown RBP9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 MybP06876 636 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 MaeaQ4VC33 396 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 CluhQ5SW19 1315 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Krt39Q6IFX4 482 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Osbpl2Q8BX94 484 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Lrrc41Q8K1C9 807 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Med24Q99K74 987 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Xpo4Q9ESJ0 1151 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Cabp5Q9JLK3 173 aa9.73□□□□□ -0.85
Trim39-201ENSMUST00000042717 Smchd1Q6P5D8 2007 aaKnown RBP9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Tfe3Q64092 572 aaKnown RBP9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Supt20hQ7TT00 530 aaKnown RBP9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Filip1Q9CS72 1211 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 AacsQ9D2R0 672 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Igf2rQ07113 2483 aaKnown RBP9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 JcadQ5DTX6 1320 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 PfasQ5SUR0 1337 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Plcg1Q62077 1302 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Dicer1Q8R418 1916 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Gm7168A0AUV4 508 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Herc3A6H6S0 1050 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Cspp1B2RX88 1205 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Atp9aO70228 1047 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Pla2g4bP0C871 782 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Serpinb2P12388 415 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Pik3r1P26450 724 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Man1a2P39098 641 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Nek1P51954 1203 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Gabpb2P81069 414 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Lmntd2Q0VET5 664 aa9.72□□□□□ -0.85
Trim39-201ENSMUST00000042717 Fndc3bQ6NWW9 1207 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms