RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 TRAF5O00463 557 aa10.82□□□□□ -0.68
CACNA1A-248ENST00000637774 ZSCAN12O43309 604 aa10.82□□□□□ -0.68
CACNA1A-248ENST00000637774 EPS15P42566 896 aa10.82□□□□□ -0.68
CACNA1A-248ENST00000637774 ARHGAP4P98171 946 aa10.82□□□□□ -0.68
CACNA1A-248ENST00000637774 SP4Q02446 784 aa10.82□□□□□ -0.68
CACNA1A-248ENST00000637774 SPAG1Q07617 926 aa10.82□□□□□ -0.68
CACNA1A-248ENST00000637774 PLS1Q14651 629 aa10.82□□□□□ -0.68
CACNA1A-248ENST00000637774 DDX12PQ92771 950 aa10.82□□□□□ -0.68
CACNA1A-248ENST00000637774 CCDC43Q96MW1 224 aaKnown RBP10.82□□□□□ -0.68
CACNA1A-248ENST00000637774 NOC4LQ9BVI4 516 aaKnown RBP10.82□□□□□ -0.68
CACNA1A-248ENST00000637774 CCSER1Q9C0I3 900 aa10.82□□□□□ -0.68
CACNA1A-248ENST00000637774 GOPCQ9HD26 462 aa10.82□□□□□ -0.68
CACNA1A-248ENST00000637774 PRR12Q9ULL5 1215 aa10.82□□□□□ -0.68
CACNA1A-248ENST00000637774 DOCK2Q92608 1830 aa10.82□□□□□ -0.68
CACNA1A-248ENST00000637774 LAMB2P55268 1798 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 IPO7O95373 1038 aaKnown RBP10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 ALAS1P13196 640 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 DGKZQ13574 1117 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 CCDC40Q4G0X9 1142 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 SH3RF1Q7Z6J0 888 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 GPBP1Q86WP2 473 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 DCAF4Q8WV16 495 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 ARAP2Q8WZ64 1704 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 NPHP3-ACAD11A0A0J9YXS1 232 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 POTEFA5A3E0 1075 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 POTEIP0CG38 1075 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 HDLBPQ00341 1268 aaKnown RBP10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 NT5DC1Q5TFE4 455 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 CNNM4Q6P4Q7 775 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 POTEGQ6S5H5 508 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 POTEEQ6S8J3 1075 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 TPH2Q8IWU9 490 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 BBXQ8WY36 941 aaPredicted RBP10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 CCDC88AQ3V6T2 1871 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 RREB1Q92766 1687 aa10.81□□□□□ -0.68
CACNA1A-248ENST00000637774 MYMKA6NI61 221 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 SFI1A8K8P3 1242 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 DYNC1I1O14576 645 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 SORBS3O60504 671 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 ENTPD3O75355 529 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 CLSTN1O94985 981 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 NSMFQ6X4W1 530 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 EHD4Q9H223 541 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 RWDD2AQ9UIY3 292 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 MYH6P13533 1939 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 M0R2N6 131 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 WNT10BO00744 389 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 ARHGAP6O43182 974 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 RASSF7Q02833 373 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 TCP11X2Q5H9J9 407 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 FKBP15Q5T1M5 1219 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 TCERG1LQ5VWI1 586 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 TOGARAM2Q6ZUX3 1019 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 KCNK18Q7Z418 384 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 FAM207AQ9NSI2 230 aaPredicted RBP10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 hCG_1984214I3L0E3 225 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 FLOT1O75955 427 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 EGFRP00533 1210 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 ARID5AQ03989 594 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 ZNF713Q8N859 430 aaPredicted RBP10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 PIGOQ8TEQ8 1089 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 C7orf43Q8WVR3 580 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 FAM151AQ8WW52 585 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 SLF1Q9BQI6 1058 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 TUBGCP2Q9BSJ2 902 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 ZNHIT6Q9NWK9 470 aaKnown RBP10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 PPP2R2CQ9Y2T4 447 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 PAXBP1Q9Y5B6 917 aa10.8□□□□□ -0.68
CACNA1A-248ENST00000637774 IGKV6D-41A0A0C4DH26 115 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 H7C1D1 291 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 CCP110O43303 1012 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 MYCLP12524 364 aaPredicted RBP10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 ZNF18P17022 549 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 PRPHP41219 470 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 GRB10Q13322 594 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 ERMNQ8TAM6 284 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 CHURC1Q8WUH1 139 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 CNOT6LQ96LI5 555 aaKnown RBP10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 TSG101Q99816 390 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 CRACR2AQ9BSW2 395 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 IRX2Q9BZI1 471 aaPredicted RBP10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 ZNF215Q9UL58 517 aaPredicted RBP10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 CCPG1Q9ULG6 757 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 LUC7L2Q9Y383 392 aaKnown RBP10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 TIAM2Q8IVF5 1701 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 ESYT2A0FGR8 921 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 BICDL2A1A5D9 508 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 SNHG28P0DPA3 235 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 SMARCA1P28370 1054 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 NAP1L1P55209 391 aaKnown RBP10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 NR1I3Q14994 352 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 ANKRD40Q6AI12 368 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 ARHGAP27Q6ZUM4 889 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 SIAH1Q8IUQ4 282 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 TAF1LQ8IZX4 1826 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 LRRC15Q8TF66 581 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 P2RX5Q93086 422 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 SH2D3AQ9BRG2 576 aa10.79□□□□□ -0.68
CACNA1A-248ENST00000637774 DEF6Q9H4E7 631 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms