RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 LRRC41Q15345 812 aa17.22■□□□□ 0.35
SCN8A-214ENST00000637709 PRAMEF18Q5VWM3 479 aa17.22■□□□□ 0.35
SCN8A-214ENST00000637709 GPIHBP1Q8IV16 184 aa17.22■□□□□ 0.35
SCN8A-214ENST00000637709 ADSSL1Q8N142 457 aa17.22■□□□□ 0.35
SCN8A-214ENST00000637709 SRRTQ9BXP5 876 aaKnown RBP17.22■□□□□ 0.35
SCN8A-214ENST00000637709 TBC1D7Q9P0N9 293 aa17.22■□□□□ 0.35
SCN8A-214ENST00000637709 RWDD2AQ9UIY3 292 aa17.22■□□□□ 0.35
SCN8A-214ENST00000637709 PRR12Q9ULL5 1215 aa17.22■□□□□ 0.35
SCN8A-214ENST00000637709 BCS1LQ9Y276 419 aa17.22■□□□□ 0.35
SCN8A-214ENST00000637709 NPHP3-ACAD11A0A0J9YXS1 232 aa17.21■□□□□ 0.35
SCN8A-214ENST00000637709 hCG_1984214I3L0E3 225 aa17.21■□□□□ 0.35
SCN8A-214ENST00000637709 OPLAHO14841 1288 aa17.21■□□□□ 0.35
SCN8A-214ENST00000637709 TBX2Q13207 712 aaPredicted RBP17.21■□□□□ 0.35
SCN8A-214ENST00000637709 TMEM266Q2M3C6 531 aa17.21■□□□□ 0.35
SCN8A-214ENST00000637709 SPDYE2Q495Y8 402 aa17.21■□□□□ 0.35
SCN8A-214ENST00000637709 SAMD7Q7Z3H4 446 aa17.21■□□□□ 0.35
SCN8A-214ENST00000637709 FBXO11Q86XK2 927 aa17.21■□□□□ 0.35
SCN8A-214ENST00000637709 IRF2BP1Q8IU81 584 aa17.21■□□□□ 0.35
SCN8A-214ENST00000637709 ZNF713Q8N859 430 aaPredicted RBP17.21■□□□□ 0.35
SCN8A-214ENST00000637709 TRIM47Q96LD4 638 aa17.21■□□□□ 0.35
SCN8A-214ENST00000637709 AK8Q96MA6 479 aa17.21■□□□□ 0.35
SCN8A-214ENST00000637709 RMND1Q9NWS8 449 aa17.21■□□□□ 0.35
SCN8A-214ENST00000637709 PIM2Q9P1W9 311 aa17.21■□□□□ 0.35
SCN8A-214ENST00000637709 ZBTB21Q9ULJ3 1066 aa17.21■□□□□ 0.35
SCN8A-214ENST00000637709 SOWAHDA6NJG2 315 aa17.21■□□□□ 0.34
SCN8A-214ENST00000637709 CASP14P31944 242 aa17.21■□□□□ 0.34
SCN8A-214ENST00000637709 RASSF7Q02833 373 aa17.21■□□□□ 0.34
SCN8A-214ENST00000637709 SYT10Q6XYQ8 523 aa17.21■□□□□ 0.34
SCN8A-214ENST00000637709 NYAP1Q6ZVC0 841 aa17.21■□□□□ 0.34
SCN8A-214ENST00000637709 KIAA0895Q8NCT3 520 aa17.21■□□□□ 0.34
SCN8A-214ENST00000637709 PYM1Q9BRP8 204 aaKnown RBP17.21■□□□□ 0.34
SCN8A-214ENST00000637709 AMNQ9BXJ7 453 aa17.21■□□□□ 0.34
SCN8A-214ENST00000637709 EXOC1Q9NV70 894 aa17.21■□□□□ 0.34
SCN8A-214ENST00000637709 PCDHA12Q9UN75 941 aa17.21■□□□□ 0.34
SCN8A-214ENST00000637709 POTEB3A0JP26 581 aa17.2■□□□□ 0.34
SCN8A-214ENST00000637709 POTECB2RU33 542 aa17.2■□□□□ 0.34
SCN8A-214ENST00000637709 E9PMD0 336 aa17.2■□□□□ 0.34
SCN8A-214ENST00000637709 MEIS1O00470 390 aa17.2■□□□□ 0.34
SCN8A-214ENST00000637709 TCP11X2Q5H9J9 407 aa17.2■□□□□ 0.34
SCN8A-214ENST00000637709 POTEBQ6S5H4 581 aa17.2■□□□□ 0.34
SCN8A-214ENST00000637709 LARP4BQ92615 738 aaKnown RBP17.2■□□□□ 0.34
SCN8A-214ENST00000637709 BAG1Q99933 345 aaPredicted RBP17.2■□□□□ 0.34
SCN8A-214ENST00000637709 GJA3Q9Y6H8 435 aa17.2■□□□□ 0.34
SCN8A-214ENST00000637709 FAM86B1E9PN63 330 aa17.2■□□□□ 0.34
SCN8A-214ENST00000637709 CFBP00751 764 aa17.2■□□□□ 0.34
SCN8A-214ENST00000637709 FAM86B2P0C5J1 330 aa17.2■□□□□ 0.34
SCN8A-214ENST00000637709 FXR1P51114 621 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCN8A-214ENST00000637709 R3HDM1Q15032 1099 aaKnown RBP17.2■□□□□ 0.34
SCN8A-214ENST00000637709 FAM151AQ8WW52 585 aa17.2■□□□□ 0.34
SCN8A-214ENST00000637709 PSDA5PKW4 1024 aaPredicted RBP17.19■□□□□ 0.34
SCN8A-214ENST00000637709 RHOBTB3O94955 611 aa17.19■□□□□ 0.34
SCN8A-214ENST00000637709 ANKRD40Q6AI12 368 aa17.19■□□□□ 0.34
SCN8A-214ENST00000637709 GIMAP8Q8ND71 665 aaPredicted RBP17.19■□□□□ 0.34
SCN8A-214ENST00000637709 GMCL1P1Q8NEA9 526 aa17.19■□□□□ 0.34
SCN8A-214ENST00000637709 PRIMPOLQ96LW4 560 aa17.19■□□□□ 0.34
SCN8A-214ENST00000637709 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.34
SCN8A-214ENST00000637709 STAT2P52630 851 aa17.19■□□□□ 0.34
SCN8A-214ENST00000637709 ARHGAP4P98171 946 aa17.19■□□□□ 0.34
SCN8A-214ENST00000637709 TBC1D10BQ4KMP7 808 aaPredicted RBP17.19■□□□□ 0.34
SCN8A-214ENST00000637709 DALRD3Q5D0E6 543 aaKnown RBP17.19■□□□□ 0.34
SCN8A-214ENST00000637709 KRT79Q5XKE5 535 aa17.19■□□□□ 0.34
SCN8A-214ENST00000637709 PPP1R18Q6NYC8 613 aa17.19■□□□□ 0.34
SCN8A-214ENST00000637709 SV2BQ7L1I2 683 aa17.19■□□□□ 0.34
SCN8A-214ENST00000637709 FGFBP2Q9BYJ0 223 aa17.19■□□□□ 0.34
SCN8A-214ENST00000637709 MYOZ2Q9NPC6 264 aa17.19■□□□□ 0.34
SCN8A-214ENST00000637709 KIAA1024Q9UPX6 916 aa17.19■□□□□ 0.34
SCN8A-214ENST00000637709 NFKBIEO00221 500 aa17.18■□□□□ 0.34
SCN8A-214ENST00000637709 GYPCP04921 128 aa17.18■□□□□ 0.34
SCN8A-214ENST00000637709 KLK7P49862 253 aa17.18■□□□□ 0.34
SCN8A-214ENST00000637709 COPB1P53618 953 aaKnown RBP17.18■□□□□ 0.34
SCN8A-214ENST00000637709 UBXN1Q04323 297 aa17.18■□□□□ 0.34
SCN8A-214ENST00000637709 PPP4R3AQ6IN85 833 aa17.18■□□□□ 0.34
SCN8A-214ENST00000637709 GMCL1Q96IK5 515 aa17.18■□□□□ 0.34
SCN8A-214ENST00000637709 TAOK3Q9H2K8 898 aa17.18■□□□□ 0.34
SCN8A-214ENST00000637709 POTEFA5A3E0 1075 aa17.18■□□□□ 0.34
SCN8A-214ENST00000637709 FANCGO15287 622 aa17.18■□□□□ 0.34
SCN8A-214ENST00000637709 POTEIP0CG38 1075 aa17.18■□□□□ 0.34
SCN8A-214ENST00000637709 CYP4A11Q02928 519 aa17.18■□□□□ 0.34
SCN8A-214ENST00000637709 POTEGQ6S5H5 508 aa17.18■□□□□ 0.34
SCN8A-214ENST00000637709 POTEEQ6S8J3 1075 aa17.18■□□□□ 0.34
SCN8A-214ENST00000637709 DDX12PQ92771 950 aa17.18■□□□□ 0.34
SCN8A-214ENST00000637709 SPDYE3A6NKU9 549 aa17.17■□□□□ 0.34
SCN8A-214ENST00000637709 NPM3O75607 178 aaKnown RBP17.17■□□□□ 0.34
SCN8A-214ENST00000637709 PRKCSHP14314 528 aaPredicted RBP17.17■□□□□ 0.34
SCN8A-214ENST00000637709 RASA3Q14644 834 aa17.17■□□□□ 0.34
SCN8A-214ENST00000637709 CSGALNACT2Q8N6G5 542 aa17.17■□□□□ 0.34
SCN8A-214ENST00000637709 JDP2Q8WYK2 163 aa17.17■□□□□ 0.34
SCN8A-214ENST00000637709 DUSP9Q99956 384 aaKnown RBP17.17■□□□□ 0.34
SCN8A-214ENST00000637709 BCAS3Q9H6U6 928 aa17.17■□□□□ 0.34
SCN8A-214ENST00000637709 ARHGEF10LQ9HCE6 1279 aa17.17■□□□□ 0.34
SCN8A-214ENST00000637709 HERC5Q9UII4 1024 aaKnown RBP17.17■□□□□ 0.34
SCN8A-214ENST00000637709 B4DLN1 442 aa17.16■□□□□ 0.34
SCN8A-214ENST00000637709 PRELPP51888 382 aa17.16■□□□□ 0.34
SCN8A-214ENST00000637709 PSMC6P62333 389 aa17.16■□□□□ 0.34
SCN8A-214ENST00000637709 CIAPIN1Q6FI81 312 aa17.16■□□□□ 0.34
SCN8A-214ENST00000637709 NCAPH2Q6IBW4 605 aa17.16■□□□□ 0.34
SCN8A-214ENST00000637709 LRRN4CLQ8ND94 238 aa17.16■□□□□ 0.34
SCN8A-214ENST00000637709 RAD54LQ92698 747 aa17.16■□□□□ 0.34
SCN8A-214ENST00000637709 IRX2Q9BZI1 471 aaPredicted RBP17.16■□□□□ 0.34
SCN8A-214ENST00000637709 ZHX3Q9H4I2 956 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms