RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-222ENST00000637533 HALP42357 657 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 SEPHS1P49903 392 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 NRG3P56975 720 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 ARF3P61204 181 aaPredicted RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 ARF1P84077 181 aaKnown RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 ID3Q02535 119 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 GSTM4Q03013 218 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 ZNF252P-AS1Q0IIN9 211 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 MTMR1Q13613 665 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 LRRC32Q14392 662 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 SUZ12Q15022 739 aaKnown RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 TESK1Q15569 626 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 CCDC96Q2M329 555 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 CCDC92Q53HC0 331 aaPredicted RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 CCDC157Q569K6 752 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 C10orf62Q5T681 223 aaPredicted RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 IFFO2Q5TF58 517 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 PIK3R6Q5UE93 754 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 PEAR1Q5VY43 1037 aaPredicted RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 EEF1DP3Q658K8 133 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 MAP1SQ66K74 1059 aaPredicted RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 ARL6IP4Q66PJ3 421 aaKnown RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 CYP4F22Q6NT55 531 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 KLHDC10Q6PID8 442 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 USP17L6PQ6QN14 398 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 CCDC149Q6ZUS6 474 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 MIGA2Q7L4E1 593 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 KRT74Q7RTS7 529 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 BRAPQ7Z569 592 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 DAAM2Q86T65 1068 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 SRLQ86TD4 932 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 ZNF598Q86UK7 904 aaKnown RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 CABP7Q86V35 215 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 TTC30AQ86WT1 665 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 ZNF227Q86WZ6 799 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 JAMLQ86YT9 394 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 DENND1CQ8IV53 801 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 TRIM59Q8IWR1 403 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 TRIM48Q8IWZ4 208 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 ZNF295-AS1Q8N0V1 137 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 KRT78Q8N1N4 520 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 ARHGEF39Q8N4T4 335 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 AOPEPQ8N6M6 819 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 FAM169BQ8N8A8 192 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 CCDC150Q8NCX0 1101 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 USP33Q8TEY7 942 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 TBC1D22AQ8WUA7 517 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 SLC5A5Q92911 643 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 CCDC47Q96A33 483 aaKnown RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 KIFC2Q96AC6 838 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 PLD4Q96BZ4 506 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 KCTD12Q96CX2 325 aaKnown RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 ASIC4Q96FT7 647 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 HSH2DQ96JZ2 352 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 HHIPQ96QV1 700 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 SEC62Q99442 399 aaKnown RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 LDHAL6BQ9BYZ2 381 aaPredicted RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 RHOBTB2Q9BYZ6 727 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 UNKQ9C0B0 810 aaKnown RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 SENP6Q9GZR1 1112 aaPredicted RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 SIK2Q9H0K1 926 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 TMEM60Q9H2L4 133 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 ZWILCHQ9H900 591 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 SENP2Q9HC62 589 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 MBIPQ9NS73 344 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 TM7SF3Q9NS93 570 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 TBC1D22BQ9NU19 505 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 TMLHEQ9NVH6 421 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 KANSL3Q9P2N6 904 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 EPS15L1Q9UBC2 864 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 ORC3Q9UBD5 711 aaPredicted RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 B4GALT6Q9UBX8 382 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 ZC3H7BQ9UGR2 993 aaKnown RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.9□□□□□ -2.11
MECP2-222ENST00000637533 KLHL3Q9UH77 587 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 FBXL21Q9UKT6 434 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 NFU1Q9UMS0 254 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 BCS1LQ9Y276 419 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 COA3Q9Y2R0 106 aaPredicted RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 AXIN2Q9Y2T1 843 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 EMC9Q9Y3B6 208 aa1.9□□□□□ -2.11
MECP2-222ENST00000637533 CFAP20Q9Y6A4 193 aaKnown RBP1.9□□□□□ -2.11
MECP2-222ENST00000637533 TCRBV16S1A1N1A0A5B0 115 aa1.89□□□□□ -2.11
MECP2-222ENST00000637533 SLC12A8A0AV02 714 aa1.89□□□□□ -2.11
MECP2-222ENST00000637533 CHURC1-FNTBB4DL54 471 aa1.89□□□□□ -2.11
MECP2-222ENST00000637533 IQCJ-SCHIP1C9J366 451 aaPredicted RBP1.89□□□□□ -2.11
MECP2-222ENST00000637533 RASA4BC9J798 803 aa1.89□□□□□ -2.11
MECP2-222ENST00000637533 CBX4O00257 560 aa1.89□□□□□ -2.11
MECP2-222ENST00000637533 WNT9AO14904 365 aa1.89□□□□□ -2.11
MECP2-222ENST00000637533 TEX33O43247 280 aa1.89□□□□□ -2.11
MECP2-222ENST00000637533 EFSO43281 561 aa1.89□□□□□ -2.11
MECP2-222ENST00000637533 RASA4O43374 803 aa1.89□□□□□ -2.11
MECP2-222ENST00000637533 GRIN3BO60391 1043 aa1.89□□□□□ -2.11
MECP2-222ENST00000637533 TSPAN3O60637 253 aa1.89□□□□□ -2.11
MECP2-222ENST00000637533 TMCC2O75069 709 aa1.89□□□□□ -2.11
MECP2-222ENST00000637533 GUCY1B2O75343 617 aa1.89□□□□□ -2.11
MECP2-222ENST00000637533 APBA3O96018 575 aa1.89□□□□□ -2.11
MECP2-222ENST00000637533 CST3P01034 146 aaPredicted RBP1.89□□□□□ -2.11
MECP2-222ENST00000637533 ESRRAP11474 423 aaPredicted RBP1.89□□□□□ -2.11
MECP2-222ENST00000637533 ALOX15P16050 662 aaPredicted RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms