RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 HOMER1Q86YM7 354 aa20.83■□□□□ 0.93
PNKP-225ENST00000636214 IWS1Q96ST2 819 aa20.83■□□□□ 0.93
PNKP-225ENST00000636214 MTG1Q9BT17 334 aaPredicted RBP20.83■□□□□ 0.93
PNKP-225ENST00000636214 MTIF3Q9H2K0 278 aaKnown RBP20.83■□□□□ 0.93
PNKP-225ENST00000636214 MAD2L2Q9UI95 211 aa20.83■□□□□ 0.93
PNKP-225ENST00000636214 BAZ2BQ9UIF8 2168 aaKnown RBP20.83■□□□□ 0.92
PNKP-225ENST00000636214 SUPT20HL2P0C7V6 817 aa20.82■□□□□ 0.92
PNKP-225ENST00000636214 CSF2RAP15509 400 aa20.82■□□□□ 0.92
PNKP-225ENST00000636214 GRM4Q14833 912 aa20.82■□□□□ 0.92
PNKP-225ENST00000636214 TMEM67Q5HYA8 995 aa20.82■□□□□ 0.92
PNKP-225ENST00000636214 CASC1Q6TDU7 716 aa20.82■□□□□ 0.92
PNKP-225ENST00000636214 SEPT14Q6ZU15 432 aa20.82■□□□□ 0.92
PNKP-225ENST00000636214 TAAR1Q96RJ0 339 aa20.82■□□□□ 0.92
PNKP-225ENST00000636214 PCDHA1Q9Y5I3 950 aa20.82■□□□□ 0.92
PNKP-225ENST00000636214 RBM8AQ9Y5S9 174 aaKnown RBP20.82■□□□□ 0.92
PNKP-225ENST00000636214 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.81■□□□□ 0.92
PNKP-225ENST00000636214 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.81■□□□□ 0.92
PNKP-225ENST00000636214 EIF2AK2P19525 551 aaKnown RBP20.81■□□□□ 0.92
PNKP-225ENST00000636214 CYP2C18P33260 490 aa20.81■□□□□ 0.92
PNKP-225ENST00000636214 PURAQ00577 322 aaKnown RBP20.81■□□□□ 0.92
PNKP-225ENST00000636214 FAM47CQ5HY64 1035 aa20.81■□□□□ 0.92
PNKP-225ENST00000636214 TBC1D5Q92609 795 aa20.81■□□□□ 0.92
PNKP-225ENST00000636214 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.81■□□□□ 0.921e-8■■■□□ 18.7
PNKP-225ENST00000636214 TRPV6Q9H1D0 765 aa20.81■□□□□ 0.92
PNKP-225ENST00000636214 ALDH8A1Q9H2A2 487 aaPredicted RBP20.81■□□□□ 0.92
PNKP-225ENST00000636214 PALM3A6NDB9 673 aaPredicted RBP20.8■□□□□ 0.92
PNKP-225ENST00000636214 B4GALT4O60513 344 aa20.8■□□□□ 0.92
PNKP-225ENST00000636214 COPS5Q92905 334 aa20.8■□□□□ 0.92
PNKP-225ENST00000636214 MAP4K1Q92918 833 aa20.8■□□□□ 0.92
PNKP-225ENST00000636214 IL23AQ9NPF7 189 aa20.8■□□□□ 0.92
PNKP-225ENST00000636214 MAP3K20Q9NYL2 800 aaKnown RBP20.8■□□□□ 0.92
PNKP-225ENST00000636214 GRIN2DO15399 1336 aa20.79■□□□□ 0.92
PNKP-225ENST00000636214 TMEM265A0A087WTH1 108 aa20.79■□□□□ 0.92
PNKP-225ENST00000636214 GH1P01241 217 aa20.79■□□□□ 0.92
PNKP-225ENST00000636214 ACRP10323 421 aa20.79■□□□□ 0.92
PNKP-225ENST00000636214 CHMP4BP1P59074 171 aa20.79■□□□□ 0.92
PNKP-225ENST00000636214 CHST3Q7LGC8 479 aa20.79■□□□□ 0.92
PNKP-225ENST00000636214 SAMD3Q8N6K7 520 aa20.79■□□□□ 0.92
PNKP-225ENST00000636214 GUCD1Q96NT3 240 aa20.79■□□□□ 0.92
PNKP-225ENST00000636214 SEMA6BQ9H3T3 888 aa20.79■□□□□ 0.92
PNKP-225ENST00000636214 NOD1Q9Y239 953 aa20.79■□□□□ 0.92
PNKP-225ENST00000636214 KIAA1217Q5T5P2 1943 aa20.78■□□□□ 0.92
PNKP-225ENST00000636214 SCN10AQ9Y5Y9 1956 aa20.78■□□□□ 0.92
PNKP-225ENST00000636214 A6NJR5 290 aa20.78■□□□□ 0.92
PNKP-225ENST00000636214 EIF3JO75822 258 aaKnown RBP20.78■□□□□ 0.92
PNKP-225ENST00000636214 NR3C2P08235 984 aa20.78■□□□□ 0.92
PNKP-225ENST00000636214 CCL23P55773 120 aa20.78■□□□□ 0.92
PNKP-225ENST00000636214 TMEM240Q5SV17 173 aa20.78■□□□□ 0.92
PNKP-225ENST00000636214 NFXL1Q6ZNB6 911 aa20.78■□□□□ 0.92
PNKP-225ENST00000636214 ZNF365Q70YC5 407 aa20.78■□□□□ 0.92
PNKP-225ENST00000636214 RPUSD2Q8IZ73 545 aaKnown RBP20.78■□□□□ 0.92
PNKP-225ENST00000636214 CTCFLQ8NI51 663 aaPredicted RBP20.78■□□□□ 0.92
PNKP-225ENST00000636214 MTMR8Q96EF0 704 aa20.78■□□□□ 0.92
PNKP-225ENST00000636214 PIGSQ96S52 555 aa20.78■□□□□ 0.92
PNKP-225ENST00000636214 NOC4LQ9BVI4 516 aaKnown RBP20.78■□□□□ 0.92
PNKP-225ENST00000636214 PXMP2Q9NR77 195 aa20.78■□□□□ 0.92
PNKP-225ENST00000636214 COL20A1Q9P218 1284 aa20.78■□□□□ 0.92
PNKP-225ENST00000636214 MRVI1Q9Y6F6 885 aa20.78■□□□□ 0.92
PNKP-225ENST00000636214 MYO9BQ13459 2157 aa20.78■□□□□ 0.92
PNKP-225ENST00000636214 GCOM1H8Y6P7 765 aaPredicted RBP20.77■□□□□ 0.92
PNKP-225ENST00000636214 ARIH2O95376 493 aa20.77■□□□□ 0.92
PNKP-225ENST00000636214 FGBP02675 491 aa20.77■□□□□ 0.92
PNKP-225ENST00000636214 POLR2MP0CAP2 368 aa20.77■□□□□ 0.92
PNKP-225ENST00000636214 DNAJB2P25686 324 aa20.77■□□□□ 0.92
PNKP-225ENST00000636214 KIF5BP33176 963 aa20.77■□□□□ 0.92
PNKP-225ENST00000636214 HSD17B4P51659 736 aa20.77■□□□□ 0.92
PNKP-225ENST00000636214 NBPF20Q3BBV1 942 aa20.77■□□□□ 0.92
PNKP-225ENST00000636214 NFRKBQ6P4R8 1299 aa20.77■□□□□ 0.92
PNKP-225ENST00000636214 STOX1Q6ZVD7 989 aa20.77■□□□□ 0.92
PNKP-225ENST00000636214 MB21D2Q8IYB1 491 aaPredicted RBP20.77■□□□□ 0.92
PNKP-225ENST00000636214 RIOX1Q9H6W3 641 aa20.77■□□□□ 0.92
PNKP-225ENST00000636214 TRMT13Q9NUP7 481 aaKnown RBP20.77■□□□□ 0.92
PNKP-225ENST00000636214 PNMA6FA0A0J9YX94 578 aa20.76■□□□□ 0.91
PNKP-225ENST00000636214 MYCLP12524 364 aaPredicted RBP20.76■□□□□ 0.91
PNKP-225ENST00000636214 LY6KQ17RY6 165 aa20.76■□□□□ 0.91
PNKP-225ENST00000636214 CENPQQ7L2Z9 268 aaPredicted RBP20.76■□□□□ 0.91
PNKP-225ENST00000636214 AFG1LQ8WV93 481 aa20.76■□□□□ 0.91
PNKP-225ENST00000636214 CDX2Q99626 313 aaPredicted RBP20.76■□□□□ 0.91
PNKP-225ENST00000636214 ANO2Q9NQ90 1003 aa20.76■□□□□ 0.91
PNKP-225ENST00000636214 SEC63Q9UGP8 760 aaKnown RBP20.76■□□□□ 0.91
PNKP-225ENST00000636214 TAF6LQ9Y6J9 622 aa20.76■□□□□ 0.91
PNKP-225ENST00000636214 UMODL1Q5DID0 1318 aa20.76■□□□□ 0.91
PNKP-225ENST00000636214 CCDC69A6NI79 296 aa20.75■□□□□ 0.91
PNKP-225ENST00000636214 PRC1O43663 620 aa20.75■□□□□ 0.91
PNKP-225ENST00000636214 DDAH1O94760 285 aa20.75■□□□□ 0.91
PNKP-225ENST00000636214 MMP3P08254 477 aa20.75■□□□□ 0.91
PNKP-225ENST00000636214 CASTP20810 708 aaKnown RBP20.75■□□□□ 0.91
PNKP-225ENST00000636214 HOXA13P31271 388 aaPredicted RBP20.75■□□□□ 0.91
PNKP-225ENST00000636214 MCM5P33992 734 aa20.75■□□□□ 0.91
PNKP-225ENST00000636214 PTPN11Q06124 597 aaPredicted RBP20.75■□□□□ 0.91
PNKP-225ENST00000636214 TROAPQ12815 778 aa20.75■□□□□ 0.91
PNKP-225ENST00000636214 CCDC62Q6P9F0 684 aa20.75■□□□□ 0.91
PNKP-225ENST00000636214 KCNV1Q6PIU1 500 aa20.75■□□□□ 0.91
PNKP-225ENST00000636214 TMTC2Q8N394 836 aa20.75■□□□□ 0.91
PNKP-225ENST00000636214 RETREG2Q8NC44 543 aa20.75■□□□□ 0.91
PNKP-225ENST00000636214 ESYT1Q9BSJ8 1104 aa20.75■□□□□ 0.91
PNKP-225ENST00000636214 MTA3Q9BTC8 594 aa20.75■□□□□ 0.91
PNKP-225ENST00000636214 SENP2Q9HC62 589 aa20.75■□□□□ 0.91
PNKP-225ENST00000636214 PPP1R11O60927 126 aaPredicted RBP20.74■□□□□ 0.91
PNKP-225ENST00000636214 CYP2C9P11712 490 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms