RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 B2RBV5 119 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 AURKAO14965 403 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 TP53P04637 393 aaPredicted RBP4.85□□□□□ -1.63
CDKL5-208ENST00000624953 RAB33AQ14088 237 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 TCEAL1Q15170 157 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 DDR2Q16832 855 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 NBPF6Q5VWK0 638 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 HEATR6Q6AI08 1181 aaKnown RBP4.85□□□□□ -1.63
CDKL5-208ENST00000624953 NLGN2Q8NFZ4 835 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 HNRNPLLQ8WVV9 542 aaKnown RBP4.85□□□□□ -1.63
CDKL5-208ENST00000624953 COPS5Q92905 334 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 BRF1Q92994 677 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 NBPF4Q96M43 638 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 RNF32Q9H0A6 362 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 FBXL21Q9UKT6 434 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 ACSL6Q9UKU0 697 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 YBX2Q9Y2T7 364 aaKnown RBP4.85□□□□□ -1.63
CDKL5-208ENST00000624953 MIA2Q96PC5 1412 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 ERVK-7P63135 1459 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 CAMSAP2Q08AD1 1489 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 PLEKHH2Q8IVE3 1493 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 ARHGEF5Q12774 1597 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 MAST1Q9Y2H9 1570 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 GCC2Q8IWJ2 1684 aa4.85□□□□□ -1.63
CDKL5-208ENST00000624953 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.85□□□□□ -1.63
CDKL5-208ENST00000624953 DIP2AQ14689 1571 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 EHBP1L1Q8N3D4 1523 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 RTEL1-TNFRSF6BF6WH68 1400 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 DHX29Q7Z478 1369 aaKnown RBP4.84□□□□□ -1.63
CDKL5-208ENST00000624953 A0A1W2PQ45 241 aaPredicted RBP4.84□□□□□ -1.63
CDKL5-208ENST00000624953 A0A1W2PQY0 241 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 SUSD5O60279 629 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 KRT1P04264 644 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 SCG5P05408 212 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 HK2P52789 917 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 CHMP4BP1P59074 171 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 SPPL2CQ8IUH8 684 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 TRIM59Q8IWR1 403 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 OXR1Q8N573 874 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 MYLIPQ8WY64 445 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 ZNF669Q96BR6 464 aaPredicted RBP4.84□□□□□ -1.63
CDKL5-208ENST00000624953 PLCD4Q9BRC7 762 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 GBP3Q9H0R5 595 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 EPN3Q9H201 632 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 NOL6Q9H6R4 1146 aaKnown RBP4.84□□□□□ -1.63
CDKL5-208ENST00000624953 CWC22Q9HCG8 908 aaKnown RBP4.84□□□□□ -1.63
CDKL5-208ENST00000624953 CRTAC1Q9NQ79 661 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 AP5S1Q9NUS5 200 aa4.84□□□□□ -1.63
CDKL5-208ENST00000624953 CDK11AQ9UQ88 783 aaPredicted RBP4.84□□□□□ -1.63
CDKL5-208ENST00000624953 SF3B6Q9Y3B4 125 aaKnown RBP4.84□□□□□ -1.63
CDKL5-208ENST00000624953 PRDM15P57071 1507 aaPredicted RBP4.83□□□□□ -1.64
CDKL5-208ENST00000624953 SCAF11Q99590 1463 aaKnown RBP4.83□□□□□ -1.64
CDKL5-208ENST00000624953 HRKO00198 91 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 PSPNO60542 156 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 USP2O75604 605 aaPredicted RBP4.83□□□□□ -1.64
CDKL5-208ENST00000624953 PPM1BO75688 479 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 GJB6O95452 261 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 IFNGR1P15260 489 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 TRHRP34981 398 aaPredicted RBP4.83□□□□□ -1.64
CDKL5-208ENST00000624953 PPP2R5EQ16537 467 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 KCNMB1Q16558 191 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 FXNQ16595 210 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 SLC10A6Q3KNW5 377 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 HSF5Q4G112 596 aaPredicted RBP4.83□□□□□ -1.64
CDKL5-208ENST00000624953 CYP2R1Q6VVX0 501 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 SPOCD1Q6ZMY3 1216 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 ANKS3Q6ZW76 656 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 WAPLQ7Z5K2 1190 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 IRF2BP1Q8IU81 584 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 BHLHE22Q8NFJ8 381 aaPredicted RBP4.83□□□□□ -1.64
CDKL5-208ENST00000624953 ABHD4Q8TB40 342 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 C1orf159Q96HA4 380 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 FGD4Q96M96 766 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 NHSL1Q5SYE7 1610 aa4.83□□□□□ -1.64
CDKL5-208ENST00000624953 CCDC141Q6ZP82 1450 aa4.82□□□□□ -1.64
CDKL5-208ENST00000624953 FAM135BQ49AJ0 1406 aa4.82□□□□□ -1.64
CDKL5-208ENST00000624953 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
CDKL5-208ENST00000624953 ARNTLO00327 626 aa4.82□□□□□ -1.64
CDKL5-208ENST00000624953 RAC2P15153 192 aa4.82□□□□□ -1.64
CDKL5-208ENST00000624953 CORO7P57737 925 aa4.82□□□□□ -1.64
CDKL5-208ENST00000624953 ERVFRD-1P60508 538 aa4.82□□□□□ -1.64
CDKL5-208ENST00000624953 YBX1P67809 324 aaKnown RBP4.82□□□□□ -1.64
CDKL5-208ENST00000624953 POU4F1Q01851 419 aa4.82□□□□□ -1.64
CDKL5-208ENST00000624953 ZNF227Q86WZ6 799 aa4.82□□□□□ -1.64
CDKL5-208ENST00000624953 BVESQ8NE79 360 aa4.82□□□□□ -1.64
CDKL5-208ENST00000624953 NPLOC4Q8TAT6 608 aa4.82□□□□□ -1.64
CDKL5-208ENST00000624953 PTCHD1Q96NR3 888 aa4.82□□□□□ -1.64
CDKL5-208ENST00000624953 JMJD8Q96S16 334 aa4.82□□□□□ -1.64
CDKL5-208ENST00000624953 C19orf44Q9H6X5 657 aa4.82□□□□□ -1.64
CDKL5-208ENST00000624953 TNFRSF12AQ9NP84 129 aa4.82□□□□□ -1.64
CDKL5-208ENST00000624953 FAM86C1Q9NVL1 165 aa4.82□□□□□ -1.64
CDKL5-208ENST00000624953 GPR55Q9Y2T6 319 aaPredicted RBP4.82□□□□□ -1.64
CDKL5-208ENST00000624953 MARF1Q9Y4F3 1742 aaKnown RBP4.82□□□□□ -1.64
CDKL5-208ENST00000624953 BRWD3Q6RI45 1802 aa4.81□□□□□ -1.64
CDKL5-208ENST00000624953 MEIS1O00470 390 aa4.81□□□□□ -1.64
CDKL5-208ENST00000624953 NAT2P11245 290 aa4.81□□□□□ -1.64
CDKL5-208ENST00000624953 PNLIPP16233 465 aa4.81□□□□□ -1.64
CDKL5-208ENST00000624953 RPL10P27635 214 aaKnown RBP4.81□□□□□ -1.64
CDKL5-208ENST00000624953 TMEM67Q5HYA8 995 aa4.81□□□□□ -1.64
CDKL5-208ENST00000624953 NOL9Q5SY16 702 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms