RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 ZNF24P17028 368 aa13.53□□□□□ -0.24
SRRT-216ENST00000618262 RDXP35241 583 aaKnown RBP13.53□□□□□ -0.24
SRRT-216ENST00000618262 TMEM179Q6ZVK1 233 aa13.53□□□□□ -0.24
SRRT-216ENST00000618262 C1orf131Q8NDD1 294 aaKnown RBP13.53□□□□□ -0.24
SRRT-216ENST00000618262 TMEM87BQ96K49 555 aa13.53□□□□□ -0.24
SRRT-216ENST00000618262 N6AMT1Q9Y5N5 214 aa13.53□□□□□ -0.24
SRRT-216ENST00000618262 F5H6K3 240 aa13.53□□□□□ -0.24
SRRT-216ENST00000618262 ITGBL1O95965 494 aaPredicted RBP13.53□□□□□ -0.24
SRRT-216ENST00000618262 MNAT1P51948 309 aa13.53□□□□□ -0.24
SRRT-216ENST00000618262 HUNKP57058 714 aa13.53□□□□□ -0.24
SRRT-216ENST00000618262 KLRC3Q07444 240 aa13.53□□□□□ -0.24
SRRT-216ENST00000618262 C11orf96Q7Z7L8 435 aa13.53□□□□□ -0.24
SRRT-216ENST00000618262 TBC1D7Q9P0N9 293 aa13.53□□□□□ -0.24
SRRT-216ENST00000618262 CIZ1Q9ULV3 898 aaPredicted RBP13.53□□□□□ -0.24
SRRT-216ENST00000618262 SIPA1L1O43166 1804 aa13.52□□□□□ -0.24
SRRT-216ENST00000618262 CPP00450 1065 aa13.52□□□□□ -0.24
SRRT-216ENST00000618262 PTPRAP18433 802 aa13.52□□□□□ -0.24
SRRT-216ENST00000618262 SLC1A4P43007 532 aa13.52□□□□□ -0.24
SRRT-216ENST00000618262 GRIK3Q13003 919 aa13.52□□□□□ -0.24
SRRT-216ENST00000618262 FAM83BQ5T0W9 1011 aa13.52□□□□□ -0.24
SRRT-216ENST00000618262 LEKR1Q6ZMV7 388 aa13.52□□□□□ -0.24
SRRT-216ENST00000618262 TMEM110Q86TL2 294 aa13.52□□□□□ -0.24
SRRT-216ENST00000618262 SLC26A6Q9BXS9 759 aa13.52□□□□□ -0.24
SRRT-216ENST00000618262 KANSL2Q9H9L4 492 aa13.52□□□□□ -0.24
SRRT-216ENST00000618262 FBXO9Q9UK97 447 aaPredicted RBP13.52□□□□□ -0.24
SRRT-216ENST00000618262 MKI67P46013 3256 aaKnown RBP13.52□□□□□ -0.24
SRRT-216ENST00000618262 NPM3O75607 178 aaKnown RBP13.52□□□□□ -0.25
SRRT-216ENST00000618262 ASNSP08243 561 aa13.52□□□□□ -0.25
SRRT-216ENST00000618262 USP8P40818 1118 aa13.52□□□□□ -0.25
SRRT-216ENST00000618262 TPM4P67936 248 aa13.52□□□□□ -0.25
SRRT-216ENST00000618262 TROAPQ12815 778 aa13.52□□□□□ -0.25
SRRT-216ENST00000618262 FANCBQ8NB91 859 aa13.52□□□□□ -0.25
SRRT-216ENST00000618262 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.52□□□□□ -0.257e-9■■■■□ 21.3
SRRT-216ENST00000618262 CCDC47Q96A33 483 aaKnown RBP13.52□□□□□ -0.25
SRRT-216ENST00000618262 GBA2Q9HCG7 927 aaPredicted RBP13.52□□□□□ -0.25
SRRT-216ENST00000618262 USP25Q9UHP3 1055 aa13.52□□□□□ -0.25
SRRT-216ENST00000618262 STIP1P31948 543 aaKnown RBP13.51□□□□□ -0.25
SRRT-216ENST00000618262 SESN3P58005 492 aa13.51□□□□□ -0.25
SRRT-216ENST00000618262 MAP3K9P80192 1104 aa13.51□□□□□ -0.25
SRRT-216ENST00000618262 RTN1Q16799 776 aa13.51□□□□□ -0.25
SRRT-216ENST00000618262 LARP1BQ659C4 914 aaKnown RBP13.51□□□□□ -0.25
SRRT-216ENST00000618262 SLFN13Q68D06 897 aa13.51□□□□□ -0.25
SRRT-216ENST00000618262 KIFC2Q96AC6 838 aa13.51□□□□□ -0.25
SRRT-216ENST00000618262 OPTNQ96CV9 577 aa13.51□□□□□ -0.25
SRRT-216ENST00000618262 SNCAIPQ9Y6H5 919 aa13.51□□□□□ -0.25
SRRT-216ENST00000618262 CTDNEP1O95476 244 aa13.51□□□□□ -0.25
SRRT-216ENST00000618262 NDUFB10O96000 172 aa13.51□□□□□ -0.25
SRRT-216ENST00000618262 IREB2P48200 963 aaKnown RBP13.51□□□□□ -0.25
SRRT-216ENST00000618262 TANGO6Q9C0B7 1094 aa13.51□□□□□ -0.25
SRRT-216ENST00000618262 RSPH9Q9H1X1 276 aaPredicted RBP13.51□□□□□ -0.25
SRRT-216ENST00000618262 FAM217BQ9NTX9 383 aaPredicted RBP13.51□□□□□ -0.25
SRRT-216ENST00000618262 PITPNM2Q9BZ72 1349 aa13.51□□□□□ -0.25
SRRT-216ENST00000618262 ZSCAN9O15535 394 aaPredicted RBP13.5□□□□□ -0.25
SRRT-216ENST00000618262 CBFA2T2O43439 604 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 TPPPO94811 219 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 GJA8P48165 433 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 ANKRD1Q15327 319 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 DBN1Q16643 649 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 GADL1Q6ZQY3 521 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 FERMT3Q86UX7 667 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 SCYL3Q8IZE3 742 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 ARMC2Q8NEN0 867 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 CTCFLQ8NI51 663 aaPredicted RBP13.5□□□□□ -0.25
SRRT-216ENST00000618262 SLC10A4Q96EP9 437 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 CCDC17Q96LX7 622 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 V9GY48 417 aaPredicted RBP13.5□□□□□ -0.25
SRRT-216ENST00000618262 HTTP42858 3142 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 TMEM232C9JQI7 657 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 CTNND1O60716 968 aaKnown RBP13.5□□□□□ -0.25
SRRT-216ENST00000618262 GJB2P29033 226 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 ELF1P32519 619 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 FXNQ16595 210 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 ZSCAN23Q3MJ62 389 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 KMT5BQ4FZB7 885 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 KLHL10Q6JEL2 608 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 SRBD1Q8N5C6 995 aaKnown RBP13.5□□□□□ -0.25
SRRT-216ENST00000618262 GPKOWQ92917 476 aaPredicted RBP eCLIP13.5□□□□□ -0.256e-7■□□□□ 8.4
SRRT-216ENST00000618262 GTF3C6Q969F1 213 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 MKS1Q9NXB0 559 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 DNAH12Q6ZR08 3092 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 PTPDC1A2A3K4 754 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 PDHBP11177 359 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 TOP1P11387 765 aaKnown RBP13.5□□□□□ -0.25
SRRT-216ENST00000618262 C2orf69Q8N8R5 385 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 DHRS1Q96LJ7 313 aa13.5□□□□□ -0.25
SRRT-216ENST00000618262 EIF3CLB5ME19 914 aaKnown RBP13.49□□□□□ -0.25
SRRT-216ENST00000618262 KLRF2D3W0D1 207 aa13.49□□□□□ -0.25
SRRT-216ENST00000618262 LIFRP42702 1097 aa13.49□□□□□ -0.25
SRRT-216ENST00000618262 SFMBT2Q5VUG0 894 aa13.49□□□□□ -0.25
SRRT-216ENST00000618262 ARMC9Q7Z3E5 817 aa13.49□□□□□ -0.25
SRRT-216ENST00000618262 METTL16Q86W50 562 aaKnown RBP13.49□□□□□ -0.25
SRRT-216ENST00000618262 DGKHQ86XP1 1220 aa13.49□□□□□ -0.25
SRRT-216ENST00000618262 C17orf53Q8N3J3 647 aaPredicted RBP13.49□□□□□ -0.25
SRRT-216ENST00000618262 IQUBQ8NA54 791 aa13.49□□□□□ -0.25
SRRT-216ENST00000618262 SPC24Q8NBT2 197 aa13.49□□□□□ -0.25
SRRT-216ENST00000618262 WNK4Q96J92 1243 aa13.49□□□□□ -0.25
SRRT-216ENST00000618262 ZIC5Q96T25 663 aa13.49□□□□□ -0.25
SRRT-216ENST00000618262 EIF3CQ99613 913 aaKnown RBP13.49□□□□□ -0.25
SRRT-216ENST00000618262 FOCADQ5VW36 1801 aa13.49□□□□□ -0.25
SRRT-216ENST00000618262 VPS37CA5D8V6 355 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms