RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 MYO1FO00160 1098 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 VPS41P49754 854 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 G2E3Q7L622 706 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 NACC1Q96RE7 527 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 THRAP3Q9Y2W1 955 aaKnown RBP12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 USP19O94966 1318 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 XDHP47989 1333 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 U2AF2P26368 475 aaKnown RBP eCLIP12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 ODR4Q5SWX8 454 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 TRMT44Q8IYL2 757 aaKnown RBP12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 CCDC24Q8N4L8 307 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 GNGT2O14610 69 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 PPEF1O14829 653 aaPredicted RBP12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 TTI1O43156 1089 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 CPP00450 1065 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 KLC3Q6P597 504 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 RFX6Q8HWS3 928 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 CCDC17Q96LX7 622 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 STK17AQ9UEE5 414 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 LUC7L3O95232 432 aaKnown RBP12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 TCP1P17987 556 aaKnown RBP12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 BTDP43251 543 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 PDE1BQ01064 536 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 AMNQ9BXJ7 453 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 PTPN22Q9Y2R2 807 aa12.14□□□□□ -0.47
CCDC144B-208ENST00000618081 SPECC1L-ADORA2AF8WAN1 911 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 AK8Q96MA6 479 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 TM6SF1Q9BZW5 370 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 MRPL46Q9H2W6 279 aaKnown RBP12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 SLAIN2Q9P270 581 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 MYOM2P54296 1465 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 TMC4Q7Z404 712 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 SDR42E1Q8WUS8 393 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 YEATS2Q9ULM3 1422 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 GPC4O75487 556 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 ANKRD20A4Q4UJ75 823 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 ANKRD20A8PQ5CZ79 823 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 ANKRD20A2Q5SQ80 823 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 ANKRD20A1Q5TYW2 823 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 NDUFAF2Q8N183 169 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 NT5C1BQ96P26 610 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 NUP153P49790 1475 aaKnown RBP12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 GTPBP6O43824 516 aaPredicted RBP12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 PMLP29590 882 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 POLR2FP61218 127 aaKnown RBP12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 IL9RQ01113 521 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 SRRM1Q8IYB3 904 aaKnown RBP12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 STAMQ92783 540 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 TMEM232C9JQI7 657 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 MAP3K7O43318 606 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 OAS2P29728 719 aaKnown RBP12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 YWHAGP61981 247 aaKnown RBP eCLIP12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 RBM6P78332 1123 aaKnown RBP12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 ADCY9O60503 1353 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 ZNF804BA4D1E1 1349 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 FANCBQ8NB91 859 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 TMTC3Q6ZXV5 915 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 DNAAF3Q8N9W5 541 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 BAIAP2L1Q9UHR4 511 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 SERTAD1Q9UHV2 236 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 KIAA1024Q9UPX6 916 aa12.13□□□□□ -0.47
CCDC144B-208ENST00000618081 GSTA4O15217 222 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 BUB1O43683 1085 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 MX2P20592 715 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 SLFN13Q68D06 897 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 DNAJC10Q8IXB1 793 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 PI4K2BQ8TCG2 481 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 RNF139Q8WU17 664 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 EFHD1Q9BUP0 239 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 PSMC2P35998 433 aaKnown RBP12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 LRRC43Q8N309 656 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 PPWD1Q96BP3 646 aaKnown RBP12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 PNMA3Q9UL41 463 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 INO80B-WBP1J3KQ70 363 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 DOK7Q18PE1 504 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 KCTD6Q8NC69 237 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 INO80BQ9C086 356 aaPredicted RBP12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 XPO4Q9C0E2 1151 aaKnown RBP12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 ABCC2Q92887 1545 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 JAK2O60674 1132 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 ARL13BQ3SXY8 428 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 PGBD1Q96JS3 809 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 KMT5AQ9NQR1 393 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 IL13P35225 146 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 THOC5Q13769 683 aaKnown RBP12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 TRIM68Q6AZZ1 485 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 NLGN1Q8N2Q7 840 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 IL1RL1Q01638 556 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 C10orf76Q5T2E6 689 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 LEMD3Q9Y2U8 911 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 ZFYVE16Q7Z3T8 1539 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 PFKFB1P16118 471 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 ARL4AP40617 200 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 PTGDRQ13258 359 aa12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 RSBN1LQ6PCB5 846 aaPredicted RBP12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 MYLK4Q86YV6 388 aaPredicted RBP12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 MRPL47Q9HD33 250 aaKnown RBP12.12□□□□□ -0.47
CCDC144B-208ENST00000618081 TMEM247A6NEH6 219 aa12.11□□□□□ -0.47
CCDC144B-208ENST00000618081 Q3C1V9 767 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms