RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 CCDC188H7C350 402 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 GGCXP38435 758 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 ADCY2Q08462 1091 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 ADCY1Q08828 1119 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 KRT31Q15323 416 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 BPIFA3Q9BQP9 254 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 ZMYND12Q9H0C1 365 aa11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.6□□□□□ -0.55
CLTCL1-209ENST00000617103 KCNQ3O43525 872 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 SERPING1P05155 500 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 MYCLP12524 364 aaPredicted RBP11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 PPP2R5CQ13362 524 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 LRRC24Q50LG9 513 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 RBM26Q5T8P6 1007 aaKnown RBP11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 CYP4F22Q6NT55 531 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 ANGPTL2Q9UKU9 493 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 MYOM2P54296 1465 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 SATB1Q01826 763 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 ASPHQ12797 758 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 SGO2Q562F6 1265 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 NUGGCQ68CJ6 796 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 ELAC2Q9BQ52 826 aaKnown RBP11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 DDX25Q9UHL0 483 aaKnown RBP11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 ANAPC5Q9UJX4 755 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 PLAAQ9Y263 795 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 DNAJC8O75937 253 aaPredicted RBP11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 AFPP02771 609 aaKnown RBP11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 KRT19P08727 400 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 ANKRD20A4Q4UJ75 823 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 ANKRD20A8PQ5CZ79 823 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 ANKRD20A2Q5SQ80 823 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 ANKRD20A1Q5TYW2 823 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 NBPF10Q6P3W6 841 aaKnown RBP11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 CDKL2Q92772 493 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 ST7Q9NRC1 585 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 MX2P20592 715 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 POLR2BP30876 1174 aaKnown RBP11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 CTSWP56202 376 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 NR5A1Q13285 461 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 KRT81Q14533 505 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 TMED2Q15363 201 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 MB21D1Q8N884 522 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 PGBD1Q96JS3 809 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 SUDS3Q9H7L9 328 aaPredicted RBP11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 MAST1Q9Y2H9 1570 aa11.59□□□□□ -0.55
CLTCL1-209ENST00000617103 ABCC10Q5T3U5 1492 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 USP27XA6NNY8 438 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 MAPK13O15264 365 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 HOXA7P31268 230 aaPredicted RBP11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 BPIFB4P59827 614 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 PAGE5Q96GU1 130 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 STAM2O75886 525 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 RNF8O76064 485 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 KAZNQ674X7 775 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 FAM133AQ8N9E0 248 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 GGA1Q9UJY5 639 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 TBX22Q9Y458 520 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 K7ENM7 598 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 DR1Q01658 176 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 DNAJC10Q8IXB1 793 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 ABTB1Q969K4 478 aaPredicted RBP11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 NDST4Q9H3R1 872 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 EPS15L1Q9UBC2 864 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 STK17AQ9UEE5 414 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 KDM5AP29375 1690 aaKnown RBP11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 GOLGA8QA0A0J9YX86 632 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 GOLGA8OA6NCC3 632 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 GOLGA8NF8WBI6 632 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 GPC4O75487 556 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 LMNAP02545 664 aaKnown RBP11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 CYP2C19P33261 490 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 PTK2Q05397 1052 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 MMEL1Q495T6 779 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 ARMCX5Q6P1M9 558 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 SRLQ86TD4 932 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 SMCR8Q8TEV9 937 aaPredicted RBP11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 RBM17Q96I25 401 aaKnown RBP11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 IFT122Q9HBG6 1241 aa11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 XAB2Q9HCS7 855 aaKnown RBP11.58□□□□□ -0.56
CLTCL1-209ENST00000617103 PLEKHG3A1L390 1219 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 KIF1CO43896 1103 aaKnown RBP11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 MMEP08473 750 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 ESRRAP11474 423 aaPredicted RBP11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 P4HA1P13674 534 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 GARSP41250 739 aaKnown RBP11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 OTUD6AQ7L8S5 288 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 ST13P4Q8IZP2 240 aaPredicted RBP11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 PDZD8Q8NEN9 1154 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 LRGUKQ96M69 825 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 PCDHA4Q9UN74 947 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 KIAA1024Q9UPX6 916 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 ZDHHC9Q9Y397 364 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 MAD1L1Q9Y6D9 718 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 SOS2Q07890 1332 aaPredicted RBP11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 GMNCA6NCL1 334 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 PRPF6O94906 941 aaKnown RBP11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 MSH2P43246 934 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 MFAP3P55082 362 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 PDE1BQ01064 536 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 MYL7Q01449 175 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms