RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 CHURC1Q8WUH1 139 aa9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 CCDC51Q96ER9 411 aa9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 TAOK3Q9H2K8 898 aa9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 BMP3P12645 472 aa9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 CXCR5P32302 372 aa9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 GUCY2FP51841 1108 aa9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 PPP1R7Q15435 360 aa9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 TXNRD1Q16881 649 aa9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 EAPPQ56P03 285 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 SARM1Q6SZW1 724 aa9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 GADL1Q6ZQY3 521 aa9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 MRPL11Q9Y3B7 192 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 PSDA5PKW4 1024 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 STX10O60499 249 aa9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 XKR9Q5GH70 373 aa9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 RASGRP2Q7LDG7 609 aa9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 USP37Q86T82 979 aa9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 NHEJ1Q9H9Q4 299 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 USTQ9Y2C2 406 aa9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 SAR1BQ9Y6B6 198 aa9.86□□□□□ -0.83
PDLIM5-222ENST00000615540 NEBLO76041 1014 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 HPDP32754 393 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 MRPS25P82663 173 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 SF3A3Q12874 501 aaKnown RBP eCLIP9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 C12orf60Q5U649 245 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 HOOK2Q96ED9 719 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 PI4KBQ9UBF8 816 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 EPN1Q9Y6I3 576 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 E9PMD0 336 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 AP5Z1O43299 807 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 PLA2G4BP0C869 781 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 FCER1AP12319 257 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 USP49Q70CQ1 688 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 DGKHQ86XP1 1220 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 MB21D1Q8N884 522 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 BARHL2Q9NY43 387 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 CTTNBP2NLQ9P2B4 639 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 TCRBV5S4A2TA0A5A2 114 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 ETF1P62495 437 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 VWA3BQ502W6 1294 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 WDR44Q5JSH3 913 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 GPATCH4Q5T3I0 446 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 SEL1L2Q5TEA6 688 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 BARGINQ6ZT62 677 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 FAM133AQ8N9E0 248 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 PIGOQ8TEQ8 1089 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 MRRFQ96E11 262 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 IFT74Q96LB3 600 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 BPIFA3Q9BQP9 254 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 SPOPO43791 374 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 TNNC1P63316 161 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 SF3B3Q15393 1217 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 SLC4A9Q96Q91 983 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 ANO3Q9BYT9 981 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 TOPAZ1Q8N9V7 1692 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 ABCB11O95342 1321 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 PRPF6O94906 941 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 ARHGAP27Q6ZUM4 889 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 BANK1Q8NDB2 785 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 AK8Q96MA6 479 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 IMPG2Q9BZV3 1241 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 KANSL2Q9H9L4 492 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 RGPD2P0DJD1 1756 aa9.85□□□□□ -0.83
PDLIM5-222ENST00000615540 GNA14O95837 355 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 NR2F2P24468 414 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 BAG6P46379 1132 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 ZNF772Q68DY9 489 aaPredicted RBP9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 KDM4FA0A1W2PPD8 638 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 NF2P35240 595 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 TXNRD3Q86VQ6 643 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 DHTKD1Q96HY7 919 aaPredicted RBP9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 EPC1Q9H2F5 836 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 THAP9Q9H5L6 903 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 STK24Q9Y6E0 443 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 TLDC2A0PJX2 215 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 KCNK3O14649 394 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 ORC4O43929 436 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 OPA1O60313 960 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 EN1Q05925 392 aaPredicted RBP9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 DAAM2Q86T65 1068 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 NBPF11Q86T75 865 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 CALCOCO1Q9P1Z2 691 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 DAGLAQ9Y4D2 1042 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 SMIM22K7EJ46 135 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 PHLDB2Q86SQ0 1253 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 ZNF579Q8NAF0 562 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 EXOC7Q9UPT5 735 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 GINS2Q9Y248 185 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 SRGAP2O75044 1071 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 MFAP3LO75121 409 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 DLATP10515 647 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 CYP27A1Q02318 531 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 FAM178BQ8IXR5 827 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 UBE2Q2Q8WVN8 375 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 RAD54LQ92698 747 aa9.84□□□□□ -0.83
PDLIM5-222ENST00000615540 NOP56O00567 594 aaKnown RBP9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 ZBTB5O15062 677 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 MTF1Q14872 753 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 FBXO33Q7Z6M2 555 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 NCAPG2Q86XI2 1143 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms