RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 PDGFBP01127 241 aaPredicted RBP8.28□□□□□ -1.08
MUC1-227ENST00000615517 SELPP16109 830 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 PTPN11Q06124 597 aaPredicted RBP8.28□□□□□ -1.08
MUC1-227ENST00000615517 KLRC3Q07444 240 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 SIGLEC14Q08ET2 396 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 HYAL1Q12794 435 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 SMAD4Q13485 552 aaKnown RBP8.28□□□□□ -1.08
MUC1-227ENST00000615517 ALDH1L2Q3SY69 923 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 TRAF7Q6Q0C0 670 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 C16orf86Q6ZW13 317 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 LRRC8DQ7L1W4 858 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 MORC4Q8TE76 937 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 AFAP1L1Q8TED9 768 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 KIFC2Q96AC6 838 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 CNTNAP3BQ96NU0 1288 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 PURBQ96QR8 312 aaKnown RBP8.28□□□□□ -1.08
MUC1-227ENST00000615517 CRBNQ96SW2 442 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 CNTNAP3Q9BZ76 1288 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 NOB1Q9ULX3 412 aaKnown RBP8.28□□□□□ -1.08
MUC1-227ENST00000615517 INSL6Q9Y581 213 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 OTOGLQ3ZCN5 2332 aa8.28□□□□□ -1.08
MUC1-227ENST00000615517 PKD1L2Q7Z442 2459 aa8.27□□□□□ -1.09
MUC1-227ENST00000615517 TCRBV5S4A2TA0A5A2 114 aa8.27□□□□□ -1.09
MUC1-227ENST00000615517 USP17L12C9JPN9 530 aa8.27□□□□□ -1.09
MUC1-227ENST00000615517 USP17L21D6R901 530 aa8.27□□□□□ -1.09
MUC1-227ENST00000615517 GALR2O43603 387 aaPredicted RBP8.27□□□□□ -1.09
MUC1-227ENST00000615517 CPT1AP50416 773 aa8.27□□□□□ -1.09
MUC1-227ENST00000615517 OAZ1P54368 228 aa8.27□□□□□ -1.09
MUC1-227ENST00000615517 MBTPS1Q14703 1052 aa8.27□□□□□ -1.09
MUC1-227ENST00000615517 CBX2Q14781 532 aaPredicted RBP8.27□□□□□ -1.09
MUC1-227ENST00000615517 PTGISQ16647 500 aa8.27□□□□□ -1.09
MUC1-227ENST00000615517 C12orf60Q5U649 245 aa8.27□□□□□ -1.09
MUC1-227ENST00000615517 GDF6Q6KF10 455 aaPredicted RBP8.27□□□□□ -1.09
MUC1-227ENST00000615517 ADSSL1Q8N142 457 aa8.27□□□□□ -1.09
MUC1-227ENST00000615517 CAGE1Q8TC20 777 aa8.27□□□□□ -1.09
MUC1-227ENST00000615517 RMDN1Q96DB5 314 aa8.27□□□□□ -1.09
MUC1-227ENST00000615517 WDR11Q9BZH6 1224 aa8.27□□□□□ -1.09
MUC1-227ENST00000615517 CCDC8Q9H0W5 538 aaPredicted RBP8.27□□□□□ -1.09
MUC1-227ENST00000615517 ACAD9Q9H845 621 aa8.27□□□□□ -1.09
MUC1-227ENST00000615517 VTA1Q9NP79 307 aa8.27□□□□□ -1.09
MUC1-227ENST00000615517 SMC4Q9NTJ3 1288 aa8.27□□□□□ -1.09
MUC1-227ENST00000615517 COG6Q9Y2V7 657 aa8.27□□□□□ -1.09
MUC1-227ENST00000615517 RBM47A0AV96 593 aaKnown RBP8.26□□□□□ -1.09
MUC1-227ENST00000615517 NCK2O43639 380 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 KDM4AO75164 1064 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 LGR5O75473 907 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 GNAI3P08754 354 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 CKBP12277 381 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 PDE6AP16499 860 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 RBL2Q08999 1139 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 IKBKEQ14164 716 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 SLFNL1Q499Z3 407 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 MUM1L1Q5H9M0 696 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 TMED8Q6PL24 325 aaPredicted RBP8.26□□□□□ -1.09
MUC1-227ENST00000615517 FRMD5Q7Z6J6 570 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 FBXO11Q86XK2 927 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 TMEM192Q8IY95 271 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 OR6J1Q8NGC5 347 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 COPS5Q92905 334 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 EAF2Q96CJ1 260 aaPredicted RBP8.26□□□□□ -1.09
MUC1-227ENST00000615517 MSLNLQ96KJ4 702 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 SAMD11Q96NU1 681 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 ARMT1Q9H993 441 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 GPHNQ9NQX3 736 aaPredicted RBP8.26□□□□□ -1.09
MUC1-227ENST00000615517 RNF146Q9NTX7 359 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 CYP39A1Q9NYL5 469 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 CD207Q9UJ71 328 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 NOD1Q9Y239 953 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 CTDP1Q9Y5B0 961 aaPredicted RBP8.26□□□□□ -1.09
MUC1-227ENST00000615517 ZNF532Q9HCE3 1301 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 PLXNA4Q9HCM2 1894 aa8.26□□□□□ -1.09
MUC1-227ENST00000615517 FANCMQ8IYD8 2048 aa8.25□□□□□ -1.09
MUC1-227ENST00000615517 A6NJR5 290 aa8.25□□□□□ -1.09
MUC1-227ENST00000615517 GRM6O15303 877 aa8.25□□□□□ -1.09
MUC1-227ENST00000615517 EFCAB14O75071 495 aa8.25□□□□□ -1.09
MUC1-227ENST00000615517 EYA4O95677 639 aa8.25□□□□□ -1.09
MUC1-227ENST00000615517 LINC00271P0C7V0 271 aa8.25□□□□□ -1.09
MUC1-227ENST00000615517 NUBP1P53384 320 aa8.25□□□□□ -1.09
MUC1-227ENST00000615517 ADAM15Q13444 863 aa8.25□□□□□ -1.09
MUC1-227ENST00000615517 TRIM71Q2Q1W2 868 aaKnown RBP8.25□□□□□ -1.09
MUC1-227ENST00000615517 SLC9C2Q5TAH2 1124 aa8.25□□□□□ -1.09
MUC1-227ENST00000615517 MYOCDQ8IZQ8 938 aa8.25□□□□□ -1.09
MUC1-227ENST00000615517 CCDC155Q8N6L0 562 aa8.25□□□□□ -1.09
MUC1-227ENST00000615517 WNT8BQ93098 351 aa8.25□□□□□ -1.09
MUC1-227ENST00000615517 TRERF1Q96PN7 1200 aa8.25□□□□□ -1.09
MUC1-227ENST00000615517 API5Q9BZZ5 524 aaKnown RBP8.25□□□□□ -1.09
MUC1-227ENST00000615517 IGFLR1Q9H665 355 aa8.25□□□□□ -1.09
MUC1-227ENST00000615517 CLEC1BQ9P126 229 aa8.25□□□□□ -1.09
MUC1-227ENST00000615517 NYAP2Q9P242 653 aa8.25□□□□□ -1.09
MUC1-227ENST00000615517 FEM1BQ9UK73 627 aa8.25□□□□□ -1.09
MUC1-227ENST00000615517 E9PSI1 815 aa8.24□□□□□ -1.09
MUC1-227ENST00000615517 PARNO95453 639 aaKnown RBP8.24□□□□□ -1.09
MUC1-227ENST00000615517 RRP1P56182 461 aaKnown RBP8.24□□□□□ -1.09
MUC1-227ENST00000615517 CHMP4BP1P59074 171 aa8.24□□□□□ -1.09
MUC1-227ENST00000615517 ZNF618Q5T7W0 954 aa8.24□□□□□ -1.09
MUC1-227ENST00000615517 DGLUCYQ7Z3D6 616 aa8.24□□□□□ -1.09
MUC1-227ENST00000615517 SESTD1Q86VW0 696 aa8.24□□□□□ -1.09
MUC1-227ENST00000615517 TMEM105Q8N8V8 129 aa8.24□□□□□ -1.09
MUC1-227ENST00000615517 KAT2BQ92831 832 aa8.24□□□□□ -1.09
MUC1-227ENST00000615517 NKD2Q969F2 451 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 241.1 ms