RNA–Protein interactions for RNA: ENST00000612094.1

PDE4DIP-239, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 5

Gene PDE4DIP, Length 3,451 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-239ENST00000612094 TC2NQ8N9U0 490 aa9.12□□□□□ -0.95
PDE4DIP-239ENST00000612094 REPS2Q8NFH8 660 aa9.12□□□□□ -0.95
PDE4DIP-239ENST00000612094 RASGRP4Q8TDF6 673 aa9.12□□□□□ -0.95
PDE4DIP-239ENST00000612094 ZNF70Q9UC06 446 aaPredicted RBP9.12□□□□□ -0.95
PDE4DIP-239ENST00000612094 ABCB11O95342 1321 aa9.12□□□□□ -0.95
PDE4DIP-239ENST00000612094 MARSP56192 900 aaKnown RBP9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 LRMPQ12912 555 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 NOLC1Q14978 699 aaKnown RBP eCLIP9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 CFAP100Q494V2 611 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 TRIM65Q6PJ69 517 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 STRA6Q9BX79 667 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 TMEM260Q9NX78 707 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 STK32BQ9NY57 414 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 NEMFO60524 1076 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 GOLGA8HP0CJ92 632 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 SREBF1P36956 1147 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 MAP3K9P80192 1104 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 FANCCQ00597 558 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 SAFBQ15424 915 aaKnown RBP eCLIP9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 ZNF174Q15697 407 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 EPM2AIP1Q7L775 607 aaPredicted RBP9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 POTEDQ86YR6 584 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 CDAN1Q8IWY9 1227 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 DRC1Q96MC2 740 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 MAF1Q9H063 256 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 GINM1Q9NU53 330 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 TRPC6Q9Y210 931 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 TMEM232C9JQI7 657 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 REXO1L1PQ8IX06 675 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 KIAA0895Q8NCT3 520 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 MKNK2Q9HBH9 465 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 FAM53CQ9NYF3 392 aa9.11□□□□□ -0.95
PDE4DIP-239ENST00000612094 USP27XA6NNY8 438 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 HSD17B4P51659 736 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 USP11P51784 963 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 PMS1P54277 932 aaKnown RBP9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 MIIPQ5JXC2 388 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 FCHSD1Q86WN1 690 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 TTLL6Q8N841 843 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 SREK1Q8WXA9 508 aaKnown RBP9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 KANSL2Q9H9L4 492 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 PSDA5PKW4 1024 aaPredicted RBP9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 SMCO2A6NFE2 343 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 NKRFO15226 690 aaKnown RBP eCLIP9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 SPATA1Q5VX52 437 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 POTEEQ6S8J3 1075 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 NEK8Q86SG6 692 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 RRP36Q96EU6 259 aaKnown RBP9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 FANCLQ9NW38 375 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 PP2D1A8MPX8 630 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 SMTNL1A8MU46 457 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 USP17L10C9JJH3 530 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 TBX3O15119 743 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 OR52Z1P0C646 297 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 SYCP1Q15431 976 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 INF2Q27J81 1249 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 SOGA3Q5TF21 947 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 CNNM3Q8NE01 707 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 ZNF830Q96NB3 372 aaPredicted RBP9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 TRIM9Q9C026 710 aa9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 NAT10Q9H0A0 1025 aaKnown RBP9.1□□□□□ -0.95
PDE4DIP-239ENST00000612094 ANKRD62A6NC57 917 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 AP3B2Q13367 1082 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 CCDC186Q7Z3E2 898 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 KCNK18Q7Z418 384 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 LRRC47Q8N1G4 583 aaKnown RBP9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 TBCKQ8TEA7 893 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 FIZ1Q96SL8 496 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 NUDT12Q9BQG2 462 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 L2HGDHQ9H9P8 463 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 FAM13BQ9NYF5 915 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 NENFQ9UMX5 172 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 NDUFB10O96000 172 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 SPATA31C1P0DKV0 1188 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 CASP1P29466 404 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 SLC12A3P55017 1021 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 NLRP5P59047 1200 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 NONOQ15233 471 aaKnown RBP eCLIP9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 QRICH1Q2TAL8 776 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 CENPPQ6IPU0 288 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 PLPP6Q8IY26 295 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 MYRIPQ8NFW9 859 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 CLIP2Q9UDT6 1046 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 ZNRF3Q9ULT6 936 aa9.09□□□□□ -0.95
PDE4DIP-239ENST00000612094 HOXD13P35453 343 aa9.08□□□□□ -0.96
PDE4DIP-239ENST00000612094 NFIL3Q16649 462 aa9.08□□□□□ -0.96
PDE4DIP-239ENST00000612094 TSR1Q2NL82 804 aaKnown RBP9.08□□□□□ -0.96
PDE4DIP-239ENST00000612094 TMEM164Q5U3C3 297 aa9.08□□□□□ -0.96
PDE4DIP-239ENST00000612094 ZNF710Q8N1W2 664 aa9.08□□□□□ -0.96
PDE4DIP-239ENST00000612094 CCDC12Q8WUD4 166 aaPredicted RBP9.08□□□□□ -0.96
PDE4DIP-239ENST00000612094 CLEC4DQ8WXI8 215 aa9.08□□□□□ -0.96
PDE4DIP-239ENST00000612094 ANKRD7Q92527 254 aa9.08□□□□□ -0.96
PDE4DIP-239ENST00000612094 CD2APQ9Y5K6 639 aa9.08□□□□□ -0.96
PDE4DIP-239ENST00000612094 FRMPD2Q68DX3 1309 aaPredicted RBP9.08□□□□□ -0.96
PDE4DIP-239ENST00000612094 ZMYM2Q9UBW7 1377 aa9.08□□□□□ -0.96
PDE4DIP-239ENST00000612094 RNF225M0QZC1 329 aaPredicted RBP9.08□□□□□ -0.96
PDE4DIP-239ENST00000612094 RPN1P04843 607 aaKnown RBP9.08□□□□□ -0.96
PDE4DIP-239ENST00000612094 GCFC2P16383 781 aaKnown RBP9.08□□□□□ -0.96
PDE4DIP-239ENST00000612094 GNA11P29992 359 aa9.08□□□□□ -0.96
PDE4DIP-239ENST00000612094 BMT2Q1RMZ1 405 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms