RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 TMOD4Q9NZQ9 345 aa9.23□□□□□ -0.93
TARDBP-213ENST00000611963 TESPA1A2RU30 521 aaPredicted RBP9.22□□□□□ -0.93
TARDBP-213ENST00000611963 MANSC4A6NHS7 340 aaPredicted RBP9.22□□□□□ -0.93
TARDBP-213ENST00000611963 USP17L15C9J2P7 530 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 C19orf81C9J6K1 198 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 USP17L13C9JLJ4 530 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 USP17L11C9JVI0 530 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 USP17L18D6R9N7 530 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 USP17L22D6RA61 530 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 USP17L17D6RBQ6 530 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 USP17L19D6RCP7 530 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 USP17L20D6RJB6 530 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 IGF2BP3O00425 579 aaKnown RBP eCLIP9.22□□□□□ -0.93
TARDBP-213ENST00000611963 OPLAHO14841 1288 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 TRAPPC10P48553 1259 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 GRIN1Q05586 938 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 USP17L24Q0WX57 530 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 SREBF2Q12772 1141 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 NONOQ15233 471 aaKnown RBP eCLIP9.22□□□□□ -0.93
TARDBP-213ENST00000611963 USP17L6PQ6QN14 398 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 GADL1Q6ZQY3 521 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 TBCKQ8TEA7 893 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 MRPS27Q92552 414 aaKnown RBP9.22□□□□□ -0.93
TARDBP-213ENST00000611963 OPTNQ96CV9 577 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 ATG4CQ96DT6 458 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 AGBL1Q96MI9 1066 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 CFHR5Q9BXR6 569 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 FBXO2Q9UK22 296 aaPredicted RBP9.22□□□□□ -0.93
TARDBP-213ENST00000611963 PPP1R9AQ9ULJ8 1098 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 CEP131Q9UPN4 1083 aa9.22□□□□□ -0.93
TARDBP-213ENST00000611963 A0A1B0GVL5 298 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 A0A1W2PQ27 194 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 A0A1W2PQ64 194 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 A0A1W2PQD8 194 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 SPDYE5A6NIY4 337 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 MEIS2O14770 477 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 IRF6O14896 467 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 CUTAO60888 179 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 PPP6R2O75170 966 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 NR1I2O75469 434 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 PTPREP23469 700 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 CLK2P49760 499 aaKnown RBP9.21□□□□□ -0.94
TARDBP-213ENST00000611963 MRPL12P52815 198 aaKnown RBP9.21□□□□□ -0.94
TARDBP-213ENST00000611963 PTGDRQ13258 359 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 LETM2Q2VYF4 491 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 ZSCAN23Q3MJ62 389 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 SPECC1Q5M775 1068 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 TREML2Q5T2D2 321 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 CCDC183Q5T5S1 534 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 ADALQ6DHV7 355 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 CCDC73Q6ZRK6 1079 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 ERO1BQ86YB8 467 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 KRI1Q8N9T8 703 aaKnown RBP9.21□□□□□ -0.94
TARDBP-213ENST00000611963 PRPF38AQ8NAV1 312 aaKnown RBP9.21□□□□□ -0.94
TARDBP-213ENST00000611963 ZNF296Q8WUU4 475 aaPredicted RBP9.21□□□□□ -0.94
TARDBP-213ENST00000611963 TBC1D5Q92609 795 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 DDX27Q96GQ7 796 aaKnown RBP9.21□□□□□ -0.94
TARDBP-213ENST00000611963 P2RX7Q99572 595 aaKnown RBP9.21□□□□□ -0.94
TARDBP-213ENST00000611963 PTPN18Q99952 460 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 ANO3Q9BYT9 981 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 TMEM60Q9H2L4 133 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 SLC38A10Q9HBR0 1119 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 RAVER2Q9HCJ3 691 aaKnown RBP9.21□□□□□ -0.94
TARDBP-213ENST00000611963 DACT1Q9NYF0 836 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 CCPG1Q9ULG6 757 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 ZNF536O15090 1300 aa9.21□□□□□ -0.94
TARDBP-213ENST00000611963 A0A0G2JMZ2 1700 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 A0A0G2JLL6 359 aaPredicted RBP9.2□□□□□ -0.94
TARDBP-213ENST00000611963 GPR25O00155 361 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 EDIL3O43854 480 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 ZBED4O75132 1171 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 BMP15O95972 392 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 ICAM1P05362 532 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 HOXA13P31271 388 aaPredicted RBP9.2□□□□□ -0.94
TARDBP-213ENST00000611963 NDUFA8P51970 172 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 INHBEP58166 350 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 ATP2C1P98194 919 aaPredicted RBP9.2□□□□□ -0.94
TARDBP-213ENST00000611963 PPATQ06203 517 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 PPIL2Q13356 520 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 SH3D19Q5HYK7 790 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 VARS2Q5ST30 1063 aaKnown RBP9.2□□□□□ -0.94
TARDBP-213ENST00000611963 SHC4Q6S5L8 630 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 CATSPERGQ6ZRH7 1159 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 PRRT2Q7Z6L0 340 aaPredicted RBP9.2□□□□□ -0.94
TARDBP-213ENST00000611963 NEK8Q86SG6 692 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 CPXCR1Q8N123 301 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 C4orf32Q8N8J7 132 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 BRI3BPQ8WY22 251 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 SYAP1Q96A49 352 aaPredicted RBP9.2□□□□□ -0.94
TARDBP-213ENST00000611963 GLT8D2Q9H1C3 349 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 HOMER2Q9NSB8 354 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 MRPL11Q9Y3B7 192 aaKnown RBP9.2□□□□□ -0.94
TARDBP-213ENST00000611963 CTDP1Q9Y5B0 961 aaPredicted RBP9.2□□□□□ -0.94
TARDBP-213ENST00000611963 LCTP09848 1927 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 KIAA1217Q5T5P2 1943 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 ABCB11O95342 1321 aa9.2□□□□□ -0.94
TARDBP-213ENST00000611963 ZNFX1Q9P2E3 1918 aaKnown RBP9.19□□□□□ -0.94
TARDBP-213ENST00000611963 SYCE3A1L190 88 aa9.19□□□□□ -0.94
TARDBP-213ENST00000611963 SPDYE16A6NNV3 312 aaPredicted RBP9.19□□□□□ -0.94
TARDBP-213ENST00000611963 VWA5AO00534 786 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms