RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 SH3GLB2Q9NR46 395 aa13.66□□□□□ -0.22
CDH1-212ENST00000611625 ADAM21Q9UKJ8 722 aa13.66□□□□□ -0.22
CDH1-212ENST00000611625 CYP2D6P10635 497 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 PRCPP42785 496 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 GYS2P54840 703 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 MAP3K9P80192 1104 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 PLA2G12BQ9BX93 195 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 FAM184BQ9ULE4 1060 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 MRFAP1Q9Y605 127 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 BZW2Q9Y6E2 419 aaKnown RBP13.65□□□□□ -0.22
CDH1-212ENST00000611625 hCG_1984214I3L0E3 225 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 GCFC2P16383 781 aaKnown RBP13.65□□□□□ -0.22
CDH1-212ENST00000611625 LACTBP83111 547 aaPredicted RBP13.65□□□□□ -0.22
CDH1-212ENST00000611625 ZNF713Q8N859 430 aaPredicted RBP13.65□□□□□ -0.22
CDH1-212ENST00000611625 COA7Q96BR5 231 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 EPB41L5Q9HCM4 733 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 CAPN7Q9Y6W3 813 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 NT5C2P49902 561 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 SCNN1DP51172 638 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 SLFN13Q68D06 897 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 RBM43Q6ZSC3 357 aaKnown RBP13.65□□□□□ -0.22
CDH1-212ENST00000611625 FBXO11Q86XK2 927 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 IGDCC4Q8TDY8 1250 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 IFT74Q96LB3 600 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 PCDHA13Q9Y5I0 950 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 PNPLA7Q6ZV29 1317 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 RGS16O15492 202 aaPredicted RBP13.65□□□□□ -0.22
CDH1-212ENST00000611625 MTF1Q14872 753 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 FAM178BQ8IXR5 827 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 RNF14Q9UBS8 474 aa13.65□□□□□ -0.22
CDH1-212ENST00000611625 CYP19A1P11511 503 aaPredicted RBP13.64□□□□□ -0.23
CDH1-212ENST00000611625 PABPC4Q13310 644 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDH1-212ENST00000611625 LIN9Q5TKA1 542 aa13.64□□□□□ -0.23
CDH1-212ENST00000611625 TTC19Q6DKK2 380 aaPredicted RBP13.64□□□□□ -0.23
CDH1-212ENST00000611625 FERMT1Q9BQL6 677 aa13.64□□□□□ -0.23
CDH1-212ENST00000611625 PARP2Q9UGN5 583 aa13.64□□□□□ -0.23
CDH1-212ENST00000611625 TMEM131LA2VDJ0 1609 aa13.64□□□□□ -0.23
CDH1-212ENST00000611625 MROH7-TTC4A0A0A0MT08 1334 aa13.64□□□□□ -0.23
CDH1-212ENST00000611625 SPATS2Q86XZ4 545 aaKnown RBP13.64□□□□□ -0.23
CDH1-212ENST00000611625 TNS3Q68CZ2 1445 aa13.64□□□□□ -0.23
CDH1-212ENST00000611625 AP5Z1O43299 807 aa13.64□□□□□ -0.23
CDH1-212ENST00000611625 HARSP12081 509 aaKnown RBP13.64□□□□□ -0.23
CDH1-212ENST00000611625 PRDX5P30044 214 aa13.64□□□□□ -0.23
CDH1-212ENST00000611625 CACNB1Q02641 598 aaPredicted RBP13.64□□□□□ -0.23
CDH1-212ENST00000611625 ICA1Q05084 483 aa13.64□□□□□ -0.23
CDH1-212ENST00000611625 LRRC63Q05C16 580 aa13.64□□□□□ -0.23
CDH1-212ENST00000611625 FMR1Q06787 632 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDH1-212ENST00000611625 CEP128Q6ZU80 1094 aa13.64□□□□□ -0.23
CDH1-212ENST00000611625 MROH1Q8NDA8 1641 aa13.64□□□□□ -0.23
CDH1-212ENST00000611625 VGLL3A8MV65 326 aa13.64□□□□□ -0.23
CDH1-212ENST00000611625 NMT2O60551 498 aa13.64□□□□□ -0.23
CDH1-212ENST00000611625 ALDH3A1P30838 453 aa13.64□□□□□ -0.23
CDH1-212ENST00000611625 SF3A3Q12874 501 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDH1-212ENST00000611625 CERKLQ49MI3 558 aaPredicted RBP13.64□□□□□ -0.23
CDH1-212ENST00000611625 FTCDO95954 541 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 ATP2A2P16615 1042 aaKnown RBP13.63□□□□□ -0.23
CDH1-212ENST00000611625 NYAP1Q6ZVC0 841 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 CACNA2D3Q8IZS8 1091 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 CPXCR1Q8N123 301 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 ZCCHC17Q9NP64 241 aaKnown RBP13.63□□□□□ -0.23
CDH1-212ENST00000611625 TTLL1O95922 423 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 ATP2C1P98194 919 aaPredicted RBP13.63□□□□□ -0.23
CDH1-212ENST00000611625 ADAT2Q7Z6V5 191 aaKnown RBP13.63□□□□□ -0.23
CDH1-212ENST00000611625 MSANTD4Q8NCY6 345 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 MPHOSPH6Q99547 160 aaKnown RBP13.63□□□□□ -0.23
CDH1-212ENST00000611625 DCP1AQ9NPI6 582 aaPredicted RBP13.63□□□□□ -0.23
CDH1-212ENST00000611625 SHPRHQ149N8 1683 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 FOSP01100 380 aaPredicted RBP13.63□□□□□ -0.23
CDH1-212ENST00000611625 MYCLP12524 364 aaPredicted RBP13.63□□□□□ -0.23
CDH1-212ENST00000611625 KCNQ4P56696 695 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 PSMD2Q13200 908 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 NAA35Q5VZE5 725 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 PNMA8AQ86V59 439 aaPredicted RBP13.63□□□□□ -0.23
CDH1-212ENST00000611625 TRIM7Q9C029 511 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 RABGAP1Q9Y3P9 1069 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 TTC26A0AVF1 554 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 GAS8O95995 478 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 MXRA7P84157 204 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 CLEC4GQ6UXB4 293 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 ZNF710Q8N1W2 664 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 CCDC17Q96LX7 622 aa13.63□□□□□ -0.23
CDH1-212ENST00000611625 A0A1B0GTH6 734 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 FAM133AQ8N9E0 248 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 RSRC1Q96IZ7 334 aaKnown RBP13.62□□□□□ -0.23
CDH1-212ENST00000611625 AMNQ9BXJ7 453 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 HPS5Q9UPZ3 1129 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 AFPP02771 609 aaKnown RBP13.62□□□□□ -0.23
CDH1-212ENST00000611625 KIFC2Q96AC6 838 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 IRX2Q9BZI1 471 aaPredicted RBP13.62□□□□□ -0.23
CDH1-212ENST00000611625 MINPP1Q9UNW1 487 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 ANO9A1A5B4 782 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 SRGAP2O75044 1071 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 HOXA7P31268 230 aaPredicted RBP13.62□□□□□ -0.23
CDH1-212ENST00000611625 CDK8P49336 464 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 IRX3P78415 501 aaPredicted RBP13.62□□□□□ -0.23
CDH1-212ENST00000611625 ST3GAL1Q11201 340 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 TTLL12Q14166 644 aaPredicted RBP13.62□□□□□ -0.23
CDH1-212ENST00000611625 CHURC1Q8WUH1 139 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 SERPINB13Q9UIV8 391 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 SERPING1P05155 500 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms