RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 NOP2P46087 812 aaKnown RBP6.36□□□□□ -1.39
SMCHD1-213ENST00000609587 PPP2R5DQ14738 602 aa6.36□□□□□ -1.39
SMCHD1-213ENST00000609587 RTP2Q5QGT7 225 aa6.36□□□□□ -1.39
SMCHD1-213ENST00000609587 OLFML2BQ68BL8 750 aa6.36□□□□□ -1.39
SMCHD1-213ENST00000609587 CEP128Q6ZU80 1094 aa6.36□□□□□ -1.39
SMCHD1-213ENST00000609587 ARHGEF39Q8N4T4 335 aa6.36□□□□□ -1.39
SMCHD1-213ENST00000609587 CRACR2BQ8N4Y2 399 aaPredicted RBP6.36□□□□□ -1.39
SMCHD1-213ENST00000609587 BVESQ8NE79 360 aa6.36□□□□□ -1.39
SMCHD1-213ENST00000609587 RCC1LQ96I51 464 aaKnown RBP6.36□□□□□ -1.39
SMCHD1-213ENST00000609587 RNPC3Q96LT9 517 aaKnown RBP6.36□□□□□ -1.39
SMCHD1-213ENST00000609587 ERVK13-1Q9NX77 482 aa6.36□□□□□ -1.39
SMCHD1-213ENST00000609587 CGGBP1Q9UFW8 167 aaPredicted RBP6.36□□□□□ -1.39
SMCHD1-213ENST00000609587 A0A1W2PQU0 124 aa6.35□□□□□ -1.39
SMCHD1-213ENST00000609587 FADS2P1A8MWK0 482 aa6.35□□□□□ -1.39
SMCHD1-213ENST00000609587 FFAR3O14843 346 aa6.35□□□□□ -1.39
SMCHD1-213ENST00000609587 PNLIPP16233 465 aa6.35□□□□□ -1.39
SMCHD1-213ENST00000609587 POMZP3Q6PJE2 187 aa6.35□□□□□ -1.39
SMCHD1-213ENST00000609587 ZPBP2Q6X784 338 aa6.35□□□□□ -1.39
SMCHD1-213ENST00000609587 TMC6Q7Z403 805 aa6.35□□□□□ -1.39
SMCHD1-213ENST00000609587 LDHDQ86WU2 507 aa6.35□□□□□ -1.39
SMCHD1-213ENST00000609587 ZNF227Q86WZ6 799 aa6.35□□□□□ -1.39
SMCHD1-213ENST00000609587 SH3TC2Q8TF17 1288 aa6.35□□□□□ -1.39
SMCHD1-213ENST00000609587 THAP3Q8WTV1 239 aaPredicted RBP6.35□□□□□ -1.39
SMCHD1-213ENST00000609587 ZDHHC15Q96MV8 337 aa6.35□□□□□ -1.39
SMCHD1-213ENST00000609587 GPR20Q99678 358 aa6.35□□□□□ -1.39
SMCHD1-213ENST00000609587 CDADC1Q9BWV3 514 aa6.35□□□□□ -1.39
SMCHD1-213ENST00000609587 LGR4Q9BXB1 951 aa6.35□□□□□ -1.39
SMCHD1-213ENST00000609587 AP5S1Q9NUS5 200 aa6.35□□□□□ -1.39
SMCHD1-213ENST00000609587 PCDHA5Q9Y5H7 936 aa6.35□□□□□ -1.39
SMCHD1-213ENST00000609587 K7ESM1 405 aa6.34□□□□□ -1.39
SMCHD1-213ENST00000609587 KCNH1O95259 989 aa6.34□□□□□ -1.39
SMCHD1-213ENST00000609587 RTP1P59025 263 aa6.34□□□□□ -1.39
SMCHD1-213ENST00000609587 POU4F1Q01851 419 aa6.34□□□□□ -1.39
SMCHD1-213ENST00000609587 HSP90AA2PQ14568 343 aaPredicted RBP6.34□□□□□ -1.39
SMCHD1-213ENST00000609587 SLC14A2Q15849 920 aa6.34□□□□□ -1.39
SMCHD1-213ENST00000609587 C2orf27AQ580R0 203 aa6.34□□□□□ -1.39
SMCHD1-213ENST00000609587 SDE2Q6IQ49 451 aa6.34□□□□□ -1.39
SMCHD1-213ENST00000609587 MRGPRX3Q96LB0 322 aa6.34□□□□□ -1.39
SMCHD1-213ENST00000609587 FCRL3Q96P31 734 aaPredicted RBP6.34□□□□□ -1.39
SMCHD1-213ENST00000609587 KLHL14Q9P2G3 628 aa6.34□□□□□ -1.39
SMCHD1-213ENST00000609587 CNOT11Q9UKZ1 510 aaKnown RBP6.34□□□□□ -1.39
SMCHD1-213ENST00000609587 EMC9Q9Y3B6 208 aa6.34□□□□□ -1.39
SMCHD1-213ENST00000609587 A0A1W2PQ45 241 aaPredicted RBP6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 A0A1W2PQY0 241 aa6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 ABLIM1O14639 778 aa6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 ADCY3O60266 1144 aa6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 GSTM1P09488 218 aa6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 FAM153BP0C7A2 387 aa6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 CEBPAP49715 358 aaPredicted RBP6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 SLURP1P55000 103 aa6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 PPP2R2AP63151 447 aa6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 ZXDAP98168 799 aa6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 GRB10Q13322 594 aa6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 KIR3DS1Q14943 382 aa6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 TRIM59Q8IWR1 403 aa6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 NLGN1Q8N2Q7 840 aa6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 JMYQ8N9B5 988 aa6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 ZBTB38Q8NAP3 1195 aaPredicted RBP6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 TMEM52Q8NDY8 209 aa6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 AARSD1Q9BTE6 412 aaKnown RBP6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 KANSL2Q9H9L4 492 aa6.33□□□□□ -1.4
SMCHD1-213ENST00000609587 TRAV20A0A0B4J274 112 aa6.32□□□□□ -1.4
SMCHD1-213ENST00000609587 WTIPA6NIX2 430 aaPredicted RBP6.32□□□□□ -1.4
SMCHD1-213ENST00000609587 FGF10O15520 208 aaPredicted RBP6.32□□□□□ -1.4
SMCHD1-213ENST00000609587 TBX1O43435 398 aa6.32□□□□□ -1.4
SMCHD1-213ENST00000609587 VAMP4O75379 141 aa6.32□□□□□ -1.4
SMCHD1-213ENST00000609587 NCKAP1LP55160 1127 aa6.32□□□□□ -1.4
SMCHD1-213ENST00000609587 AMPD2Q01433 879 aa6.32□□□□□ -1.4
SMCHD1-213ENST00000609587 LONRF2Q1L5Z9 754 aa6.32□□□□□ -1.4
SMCHD1-213ENST00000609587 ZFYVE27Q5T4F4 411 aa6.32□□□□□ -1.4
SMCHD1-213ENST00000609587 GTF2IRD2BQ6EKJ0 949 aa6.32□□□□□ -1.4
SMCHD1-213ENST00000609587 SLCO6A1Q86UG4 719 aa6.32□□□□□ -1.4
SMCHD1-213ENST00000609587 GTF2IRD2Q86UP8 949 aa6.32□□□□□ -1.4
SMCHD1-213ENST00000609587 ZSWIM2Q8NEG5 633 aa6.32□□□□□ -1.4
SMCHD1-213ENST00000609587 BTN2A2Q8WVV5 523 aa6.32□□□□□ -1.4
SMCHD1-213ENST00000609587 ARHGEF4Q9NR80 690 aa6.32□□□□□ -1.4
SMCHD1-213ENST00000609587 GPR55Q9Y2T6 319 aaPredicted RBP6.32□□□□□ -1.4
SMCHD1-213ENST00000609587 PTCH2Q9Y6C5 1203 aa6.32□□□□□ -1.4
SMCHD1-213ENST00000609587 CADPSQ9ULU8 1353 aa6.31□□□□□ -1.4
SMCHD1-213ENST00000609587 ESYT3A0FGR9 886 aa6.31□□□□□ -1.4
SMCHD1-213ENST00000609587 MATN3O15232 486 aa6.31□□□□□ -1.4
SMCHD1-213ENST00000609587 IGFBP6P24592 240 aaPredicted RBP6.31□□□□□ -1.4
SMCHD1-213ENST00000609587 SQSTM1Q13501 440 aa6.31□□□□□ -1.4
SMCHD1-213ENST00000609587 ZNF827Q17R98 1081 aa6.31□□□□□ -1.4
SMCHD1-213ENST00000609587 DPY19L1Q2PZI1 675 aa6.31□□□□□ -1.4
SMCHD1-213ENST00000609587 HSF5Q4G112 596 aaPredicted RBP6.31□□□□□ -1.4
SMCHD1-213ENST00000609587 ZC3H12BQ5HYM0 836 aaKnown RBP6.31□□□□□ -1.4
SMCHD1-213ENST00000609587 GALNT18Q6P9A2 607 aa6.31□□□□□ -1.4
SMCHD1-213ENST00000609587 CYP2R1Q6VVX0 501 aa6.31□□□□□ -1.4
SMCHD1-213ENST00000609587 CDC6Q99741 560 aa6.31□□□□□ -1.4
SMCHD1-213ENST00000609587 AURKAO14965 403 aa6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 BUB1BO60566 1050 aaPredicted RBP6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 CD3EP07766 207 aa6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 IFNGR1P15260 489 aa6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 LIMS1P48059 325 aa6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 KCNC1P48547 511 aa6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 HLA-DQA1Q5Y7H0 255 aa6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 EEF1DP3Q658K8 133 aa6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 RCSD1Q6JBY9 416 aa6.3□□□□□ -1.4
SMCHD1-213ENST00000609587 HOMER1Q86YM7 354 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms