RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 TERF2Q15554 542 aa11□□□□□ -0.65
CTCFL-222ENST00000609232 BARHL2Q9NY43 387 aa11□□□□□ -0.65
CTCFL-222ENST00000609232 USP20Q9Y2K6 914 aa11□□□□□ -0.65
CTCFL-222ENST00000609232 NRXN2Q9P2S2 1712 aa11□□□□□ -0.65
CTCFL-222ENST00000609232 KRBA2Q6ZNG9 492 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 TMEM179Q6ZVK1 233 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 METTL16Q86W50 562 aaKnown RBP10.99□□□□□ -0.65
CTCFL-222ENST00000609232 REXO1Q8N1G1 1221 aaKnown RBP10.99□□□□□ -0.65
CTCFL-222ENST00000609232 SNX29Q8TEQ0 813 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 SPZ1Q9BXG8 430 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 BMP15O95972 392 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 SLFN14P0C7P3 912 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 FCER1AP12319 257 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 PTPREP23469 700 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 MCM6Q14566 821 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 SLC35G1Q2M3R5 365 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 TEX35Q5T0J7 233 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 TPH2Q8IWU9 490 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 ZNF397Q8NF99 534 aaPredicted RBP10.99□□□□□ -0.65
CTCFL-222ENST00000609232 EHD4Q9H223 541 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 LRRC37AA6NMS7 1700 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 NAV1Q8NEY1 1877 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 STXBP3O00186 592 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 UBXN1Q04323 297 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 ZNF543Q08ER8 600 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 SF3A3Q12874 501 aaKnown RBP eCLIP10.99□□□□□ -0.65
CTCFL-222ENST00000609232 TSR1Q2NL82 804 aaKnown RBP10.99□□□□□ -0.65
CTCFL-222ENST00000609232 ADGRF4Q8IZF3 695 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 KIF18AQ8NI77 898 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 SRRTQ9BXP5 876 aaKnown RBP10.99□□□□□ -0.65
CTCFL-222ENST00000609232 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.99□□□□□ -0.65
CTCFL-222ENST00000609232 MYH1P12882 1939 aa10.99□□□□□ -0.65
CTCFL-222ENST00000609232 F5H6K3 240 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 ZBTB39O15060 712 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 KLRC3Q07444 240 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 GPATCH4Q5T3I0 446 aaKnown RBP10.98□□□□□ -0.65
CTCFL-222ENST00000609232 CCDC155Q8N6L0 562 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 NLGN2Q8NFZ4 835 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 PAGR1Q9BTK6 254 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.98□□□□□ -0.65
CTCFL-222ENST00000609232 IKZF4Q9H2S9 585 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 BCAS3Q9H6U6 928 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 LRWD1Q9UFC0 647 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 FBXO2Q9UK22 296 aaPredicted RBP10.98□□□□□ -0.65
CTCFL-222ENST00000609232 A0A0U1RQJ8 604 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 TMCO5BA8MYB1 307 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 TDRD12Q587J7 1177 aaKnown RBP10.98□□□□□ -0.65
CTCFL-222ENST00000609232 RESP18Q5W5W9 173 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 MNS1Q8NEH6 495 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 AGBL3Q8NEM8 1001 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 ATRIPQ8WXE1 791 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 FUCA2Q9BTY2 467 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 PSTPIP2Q9H939 334 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 MYOZ2Q9NPC6 264 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 SH3GLB2Q9NR46 395 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 GUCA1BQ9UMX6 200 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 SRPRBQ9Y5M8 271 aaKnown RBP10.98□□□□□ -0.65
CTCFL-222ENST00000609232 NFKBIEO00221 500 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 ADCY7P51828 1080 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 NONOQ15233 471 aaKnown RBP eCLIP10.98□□□□□ -0.65
CTCFL-222ENST00000609232 FAM151AQ8WW52 585 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 FAM84AQ96KN4 292 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 SCN9AQ15858 1988 aa10.98□□□□□ -0.65
CTCFL-222ENST00000609232 WNT10BO00744 389 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 ENC1O14682 589 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 TRIM21P19474 475 aaKnown RBP10.97□□□□□ -0.65
CTCFL-222ENST00000609232 GMPSP49915 693 aaPredicted RBP10.97□□□□□ -0.65
CTCFL-222ENST00000609232 MYL5Q02045 173 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 APBA1Q02410 837 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 DCAF17Q5H9S7 520 aaPredicted RBP10.97□□□□□ -0.65
CTCFL-222ENST00000609232 FAM83BQ5T0W9 1011 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 DEF6Q9H4E7 631 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 ARHGEF10LQ9HCE6 1279 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 MAGEC2Q9UBF1 373 aaPredicted RBP10.97□□□□□ -0.65
CTCFL-222ENST00000609232 MKRN4PQ13434 485 aaPredicted RBP10.97□□□□□ -0.65
CTCFL-222ENST00000609232 RASA3Q14644 834 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 MICALL2Q8IY33 904 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 GLIS3Q8NEA6 775 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 SLF1Q9BQI6 1058 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 JMJD4Q9H9V9 463 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 MAN1B1Q9UKM7 699 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 ZNF215Q9UL58 517 aaPredicted RBP10.97□□□□□ -0.65
CTCFL-222ENST00000609232 PCDHA6Q9UN73 950 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 KIAA1024Q9UPX6 916 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 PCDHA8Q9Y5H6 950 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 MACROD2A1Z1Q3 448 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 SPDYE3A6NKU9 549 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 ELF2Q15723 593 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 NPY5RQ15761 445 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 KRT25Q7Z3Z0 450 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 ZKSCAN4Q969J2 545 aaPredicted RBP10.97□□□□□ -0.65
CTCFL-222ENST00000609232 FERMT2Q96AC1 680 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 CD2APQ9Y5K6 639 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 SDK1Q7Z5N4 2213 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 KIAA1551Q9HCM1 1747 aa10.97□□□□□ -0.65
CTCFL-222ENST00000609232 MAP1BP46821 2468 aaKnown RBP10.96□□□□□ -0.65
CTCFL-222ENST00000609232 CLIC2O15247 247 aa10.96□□□□□ -0.65
CTCFL-222ENST00000609232 NEMFO60524 1076 aa10.96□□□□□ -0.65
CTCFL-222ENST00000609232 CYP27A1Q02318 531 aa10.96□□□□□ -0.65
CTCFL-222ENST00000609232 SPDYE2Q495Y8 402 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms