RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PPFIA4O75335 1185 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 TADA3O75528 432 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 TMEM253P0C7T8 217 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 RAC2P15153 192 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 CASTP20810 708 aaKnown RBP4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 SYT1P21579 422 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 OAS2P29728 719 aaKnown RBP4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 HSPA4P34932 840 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 MAP2K2P36507 400 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 GYS2P54840 703 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 MAP2K1Q02750 393 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 LRRC14Q15048 493 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 ARHGAP29Q52LW3 1261 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 CDKAL1Q5VV42 579 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 LLGL2Q6P1M3 1020 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 CC2D1AQ6P1N0 951 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 PI16Q6UXB8 463 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 LEKR1Q6ZMV7 388 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 PRR23BQ6ZRT6 265 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 RSRC2Q7L4I2 434 aaKnown RBP4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 C12orf40Q86WS4 652 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 ERC1Q8IUD2 1116 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 FBXO15Q8NCQ5 510 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 ANKRD20A12PQ8NF67 263 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 NEK11Q8NG66 645 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 STK35Q8TDR2 534 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 RTF1Q92541 710 aaKnown RBP4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 ALKBH8Q96BT7 664 aaKnown RBP4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 TTC14Q96N46 770 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 MPHOSPH8Q99549 860 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 TM6SF1Q9BZW5 370 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 CEP44Q9C0F1 390 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 NUP62CLQ9H1M0 184 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 ALDH8A1Q9H2A2 487 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 CLSTN2Q9H4D0 955 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 NSUN3Q9H649 340 aaKnown RBP4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 ARFGAP3Q9NP61 516 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 ST7Q9NRC1 585 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 LMCD1Q9NZU5 365 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 CLIP2Q9UDT6 1046 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 LIMCH1Q9UPQ0 1083 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 CNPY2Q9Y2B0 182 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 CD109Q6YHK3 1445 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 YTHDC2Q9H6S0 1430 aaKnown RBP4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 CHD2O14647 1828 aaKnown RBP4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 SETBP1Q9Y6X0 1596 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 SALL3Q9BXA9 1300 aa4.69□□□□□ -1.66
HMGB1P50-201ENST00000605814 TARBP1Q13395 1621 aaKnown RBP4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 PNPLA6Q8IY17 1366 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 KIAA0232Q92628 1395 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 PNMA6FA0A0J9YX94 578 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 KLHL33A6NCF5 533 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 PLEKHD1A6NEE1 506 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 A6NNZ2 444 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 U2SURPO15042 1029 aaKnown RBP4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 TRIM37O94972 964 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 CFPP27918 469 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 GSTT1P30711 240 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 TDO2P48775 406 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 ZNF165P49910 485 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 SNW1Q13573 536 aaKnown RBP4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 ZKSCAN8Q15776 578 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 CCDC144BQ3MJ40 725 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 TUBB8Q3ZCM7 444 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 DNAJC21Q5F1R6 531 aaKnown RBP4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 SFRP5Q5T4F7 317 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 FYB2Q5VWT5 728 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 ZNF746Q6NUN9 644 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 NXPE4Q6UWF7 544 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 ARMCX6Q7L4S7 300 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 NPAS4Q8IUM7 802 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 DRC7Q8IY82 874 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 CCDC144CPQ8IYA2 1237 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 MFSD4AQ8N468 514 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 CCDC150Q8NCX0 1101 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 ZNF507Q8TCN5 953 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 GTF3C6Q969F1 213 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 DDX11Q96FC9 970 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 CHAMP1Q96JM3 812 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 DRC1Q96MC2 740 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 PRAM1Q96QH2 718 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 MIPEPQ99797 713 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 BPIFA3Q9BQP9 254 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 SCAND2PQ9GZW5 306 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 DNAI1Q9UI46 699 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 RAB21Q9UL25 225 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 MTMR6Q9Y217 621 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 RRP7AQ9Y3A4 280 aaKnown RBP4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 CDC42BPGQ6DT37 1551 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 INO80Q9ULG1 1556 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 NPHP3Q7Z494 1330 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 TTC21AQ8NDW8 1320 aa4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 ATXN2Q99700 1313 aaKnown RBP4.68□□□□□ -1.66
HMGB1P50-201ENST00000605814 ZC3H13Q5T200 1668 aaKnown RBP4.67□□□□□ -1.66
HMGB1P50-201ENST00000605814 TRPM2O94759 1503 aa4.67□□□□□ -1.66
HMGB1P50-201ENST00000605814 URB2Q14146 1524 aaKnown RBP4.67□□□□□ -1.66
HMGB1P50-201ENST00000605814 KNDC1Q76NI1 1749 aa4.67□□□□□ -1.66
HMGB1P50-201ENST00000605814 ADAMTS12P58397 1594 aa4.67□□□□□ -1.66
HMGB1P50-201ENST00000605814 GOLGA6L9A6NEM1 432 aa4.67□□□□□ -1.66
HMGB1P50-201ENST00000605814 TCAF2A6NFQ2 919 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms