RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	ZBTB7A	O95365	584 aa		6.37	□□□□□ -1.39
LAMA4-222	ENST00000604740	FUCA1	P04066	466 aa		6.37	□□□□□ -1.39
LAMA4-222	ENST00000604740	HDLBP	Q00341	1268 aa	Known RBP	6.37	□□□□□ -1.39
LAMA4-222	ENST00000604740	CACNB2	Q08289	660 aa	Predicted RBP	6.37	□□□□□ -1.39
LAMA4-222	ENST00000604740	SPATS1	Q496A3	300 aa		6.37	□□□□□ -1.39
LAMA4-222	ENST00000604740	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	6.37	□□□□□ -1.39
LAMA4-222	ENST00000604740	ZBTB8A	Q96BR9	441 aa		6.37	□□□□□ -1.39
LAMA4-222	ENST00000604740	NOX5	Q96PH1	765 aa		6.37	□□□□□ -1.39
LAMA4-222	ENST00000604740	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	6.37	□□□□□ -1.39
LAMA4-222	ENST00000604740	SIT1	Q9Y3P8	196 aa		6.37	□□□□□ -1.39
LAMA4-222	ENST00000604740	NTRK1	P04629	796 aa		6.36	□□□□□ -1.39
LAMA4-222	ENST00000604740	PLS3	P13797	630 aa		6.36	□□□□□ -1.39
LAMA4-222	ENST00000604740	CASP7	P55210	303 aa		6.36	□□□□□ -1.39
LAMA4-222	ENST00000604740	GJA9	P57773	515 aa		6.36	□□□□□ -1.39
LAMA4-222	ENST00000604740	SCRN1	Q12765	414 aa		6.36	□□□□□ -1.39
LAMA4-222	ENST00000604740	EFEMP1	Q12805	493 aa		6.36	□□□□□ -1.39
LAMA4-222	ENST00000604740	ZFYVE27	Q5T4F4	411 aa		6.36	□□□□□ -1.39
LAMA4-222	ENST00000604740	CPA5	Q8WXQ8	436 aa		6.36	□□□□□ -1.39
LAMA4-222	ENST00000604740	PPP1R14A	Q96A00	147 aa		6.36	□□□□□ -1.39
LAMA4-222	ENST00000604740	DDX11	Q96FC9	970 aa		6.36	□□□□□ -1.39
LAMA4-222	ENST00000604740	GPRC5C	Q9NQ84	441 aa		6.36	□□□□□ -1.39
LAMA4-222	ENST00000604740	BTG4	Q9NY30	223 aa		6.36	□□□□□ -1.39
LAMA4-222	ENST00000604740	MARCH2	Q9P0N8	246 aa		6.36	□□□□□ -1.39
LAMA4-222	ENST00000604740	NTM	Q9P121	344 aa		6.36	□□□□□ -1.39
LAMA4-222	ENST00000604740	CYP2C8	P10632	490 aa		6.35	□□□□□ -1.39
LAMA4-222	ENST00000604740	CNR2	P34972	360 aa		6.35	□□□□□ -1.39
LAMA4-222	ENST00000604740	RBM10	P98175	930 aa	Known RBP	6.35	□□□□□ -1.39
LAMA4-222	ENST00000604740	SMAD4	Q13485	552 aa	Known RBP	6.35	□□□□□ -1.39
LAMA4-222	ENST00000604740	MBLAC2	Q68D91	279 aa		6.35	□□□□□ -1.39
LAMA4-222	ENST00000604740	POMZP3	Q6PJE2	187 aa		6.35	□□□□□ -1.39
LAMA4-222	ENST00000604740	GGN	Q86UU5	652 aa		6.35	□□□□□ -1.39
LAMA4-222	ENST00000604740	DCP2	Q8IU60	420 aa	Known RBP	6.35	□□□□□ -1.39
LAMA4-222	ENST00000604740	FAM169B	Q8N8A8	192 aa		6.35	□□□□□ -1.39
LAMA4-222	ENST00000604740	ZNF513	Q8N8E2	541 aa	Predicted RBP	6.35	□□□□□ -1.39
LAMA4-222	ENST00000604740	BVES	Q8NE79	360 aa		6.35	□□□□□ -1.39
LAMA4-222	ENST00000604740	DDX1	Q92499	740 aa	Known RBP	6.35	□□□□□ -1.39
LAMA4-222	ENST00000604740	BORCS6	Q96GS4	357 aa		6.35	□□□□□ -1.39
LAMA4-222	ENST00000604740	EMC9	Q9Y3B6	208 aa		6.35	□□□□□ -1.39
LAMA4-222	ENST00000604740		K7ESM1	405 aa		6.34	□□□□□ -1.39
LAMA4-222	ENST00000604740	NOP56	O00567	594 aa	Known RBP	6.34	□□□□□ -1.39
LAMA4-222	ENST00000604740	SMARCA5	O60264	1052 aa	Predicted RBP	6.34	□□□□□ -1.39
LAMA4-222	ENST00000604740	NAT2	P11245	290 aa		6.34	□□□□□ -1.39
LAMA4-222	ENST00000604740	SARS	P49591	514 aa	Known RBP	6.34	□□□□□ -1.39
LAMA4-222	ENST00000604740	TTLL7	Q6ZT98	887 aa		6.34	□□□□□ -1.39
LAMA4-222	ENST00000604740	COPS5	Q92905	334 aa		6.34	□□□□□ -1.39
LAMA4-222	ENST00000604740	ANAPC16	Q96DE5	110 aa		6.34	□□□□□ -1.39
LAMA4-222	ENST00000604740	MRRF	Q96E11	262 aa	Known RBP	6.34	□□□□□ -1.39
LAMA4-222	ENST00000604740	APBA2	Q99767	749 aa		6.34	□□□□□ -1.39
LAMA4-222	ENST00000604740	AP5M1	Q9H0R1	490 aa		6.34	□□□□□ -1.39
LAMA4-222	ENST00000604740	SPATA6	Q9NWH7	488 aa	Predicted RBP	6.34	□□□□□ -1.39
LAMA4-222	ENST00000604740	DUSP10	Q9Y6W6	482 aa		6.34	□□□□□ -1.39
LAMA4-222	ENST00000604740	NOBOX	O60393	691 aa		6.33	□□□□□ -1.4
LAMA4-222	ENST00000604740	THBD	P07204	575 aa		6.33	□□□□□ -1.4
LAMA4-222	ENST00000604740	C8B	P07358	591 aa		6.33	□□□□□ -1.4
LAMA4-222	ENST00000604740	GTF2IRD2B	Q6EKJ0	949 aa		6.33	□□□□□ -1.4
LAMA4-222	ENST00000604740	GTF2IRD2	Q86UP8	949 aa		6.33	□□□□□ -1.4
LAMA4-222	ENST00000604740	TEX2	Q8IWB9	1127 aa		6.33	□□□□□ -1.4
LAMA4-222	ENST00000604740	PLEKHO2	Q8TD55	490 aa		6.33	□□□□□ -1.4
LAMA4-222	ENST00000604740	SEC16B	Q96JE7	1060 aa		6.33	□□□□□ -1.4
LAMA4-222	ENST00000604740	MMP19	Q99542	508 aa		6.33	□□□□□ -1.4
LAMA4-222	ENST00000604740	LNPK	Q9C0E8	428 aa		6.33	□□□□□ -1.4
LAMA4-222	ENST00000604740	STRIP2	Q9ULQ0	834 aa		6.33	□□□□□ -1.4
LAMA4-222	ENST00000604740	INPP5F	Q9Y2H2	1132 aa		6.33	□□□□□ -1.4
LAMA4-222	ENST00000604740	ZNF143	P52747	638 aa	Predicted RBP	6.32	□□□□□ -1.4
LAMA4-222	ENST00000604740	ETV3L	Q6ZN32	361 aa		6.32	□□□□□ -1.4
LAMA4-222	ENST00000604740	ZNF761	Q86XN6	746 aa	Predicted RBP	6.32	□□□□□ -1.4
LAMA4-222	ENST00000604740	TRIM59	Q8IWR1	403 aa		6.32	□□□□□ -1.4
LAMA4-222	ENST00000604740	DPF3	Q92784	378 aa		6.32	□□□□□ -1.4
LAMA4-222	ENST00000604740	GORASP1	Q9BQQ3	440 aa		6.32	□□□□□ -1.4
LAMA4-222	ENST00000604740	LGR4	Q9BXB1	951 aa		6.32	□□□□□ -1.4
LAMA4-222	ENST00000604740	ACBD3	Q9H3P7	528 aa		6.32	□□□□□ -1.4
LAMA4-222	ENST00000604740	C22orf46	C9J442	243 aa		6.31	□□□□□ -1.4
LAMA4-222	ENST00000604740	NCAPH	Q15003	741 aa		6.31	□□□□□ -1.4
LAMA4-222	ENST00000604740	ZNF827	Q17R98	1081 aa		6.31	□□□□□ -1.4
LAMA4-222	ENST00000604740	INF2	Q27J81	1249 aa		6.31	□□□□□ -1.4
LAMA4-222	ENST00000604740	HHIPL2	Q6UWX4	724 aa		6.31	□□□□□ -1.4
LAMA4-222	ENST00000604740	LINC00482	Q8N8I6	264 aa		6.31	□□□□□ -1.4
LAMA4-222	ENST00000604740	SYT3	Q9BQG1	590 aa		6.31	□□□□□ -1.4
LAMA4-222	ENST00000604740	CNOT11	Q9UKZ1	510 aa	Known RBP	6.31	□□□□□ -1.4
LAMA4-222	ENST00000604740	SGSM2	O43147	1006 aa		6.3	□□□□□ -1.4
LAMA4-222	ENST00000604740	FPR2	P25090	351 aa		6.3	□□□□□ -1.4
LAMA4-222	ENST00000604740	CD300LD	Q6UXZ3	194 aa		6.3	□□□□□ -1.4
LAMA4-222	ENST00000604740	FAM26E	Q8N5C1	309 aa		6.3	□□□□□ -1.4
LAMA4-222	ENST00000604740	ADAMTS17	Q8TE56	1095 aa		6.3	□□□□□ -1.4
LAMA4-222	ENST00000604740	SEC14L1	Q92503	715 aa		6.3	□□□□□ -1.4
LAMA4-222	ENST00000604740	C11orf84	Q9BUA3	381 aa	Predicted RBP	6.3	□□□□□ -1.4
LAMA4-222	ENST00000604740	TGIF2	Q9GZN2	237 aa		6.3	□□□□□ -1.4
LAMA4-222	ENST00000604740	NKX2-4	Q9H2Z4	354 aa		6.3	□□□□□ -1.4
LAMA4-222	ENST00000604740	CCSER2	Q9H7U1	834 aa		6.3	□□□□□ -1.4
LAMA4-222	ENST00000604740	CYP26B1	Q9NR63	512 aa		6.3	□□□□□ -1.4
LAMA4-222	ENST00000604740	PALD1	Q9ULE6	856 aa		6.3	□□□□□ -1.4
LAMA4-222	ENST00000604740	THBS2	P35442	1172 aa		6.29	□□□□□ -1.4
LAMA4-222	ENST00000604740	RPL11	P62913	178 aa	Known RBP	6.29	□□□□□ -1.4
LAMA4-222	ENST00000604740	ZXDC	Q2QGD7	858 aa	Predicted RBP	6.29	□□□□□ -1.4
LAMA4-222	ENST00000604740	ZC3H18	Q86VM9	953 aa	Known RBP	6.29	□□□□□ -1.4
LAMA4-222	ENST00000604740	FRS2	Q8WU20	508 aa		6.29	□□□□□ -1.4
LAMA4-222	ENST00000604740	BTN2A2	Q8WVV5	523 aa		6.29	□□□□□ -1.4
LAMA4-222	ENST00000604740	MRGPRX3	Q96LB0	322 aa		6.29	□□□□□ -1.4
LAMA4-222	ENST00000604740	GPR20	Q99678	358 aa		6.29	□□□□□ -1.4
LAMA4-222	ENST00000604740	PCDH18	Q9HCL0	1135 aa		6.29	□□□□□ -1.4

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