RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-222ENST00000604236 CDAN1Q8IWY9 1227 aa17.14■□□□□ 0.33
FGFR2-222ENST00000604236 OR8K1Q8NGG5 319 aa17.14■□□□□ 0.33
FGFR2-222ENST00000604236 BARHL2Q9NY43 387 aa17.14■□□□□ 0.33
FGFR2-222ENST00000604236 DDTLA6NHG4 134 aaPredicted RBP17.13■□□□□ 0.33
FGFR2-222ENST00000604236 FTCDO95954 541 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 ZNF658Q5TYW1 1059 aaPredicted RBP17.13■□□□□ 0.33
FGFR2-222ENST00000604236 WDR78Q5VTH9 848 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 KRT27Q7Z3Y8 459 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 LEMD3Q9Y2U8 911 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 MYMKA6NI61 221 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 ECE1P42892 770 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 CYP2J2P51589 502 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 KIF5AQ12840 1032 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 ARHGAP44Q17R89 818 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 FAM84AQ96KN4 292 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 LACRTQ9GZZ8 138 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 ZNF277Q9NRM2 450 aaPredicted RBP17.13■□□□□ 0.33
FGFR2-222ENST00000604236 ABHD10Q9NUJ1 306 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 FBXO28Q9NVF7 368 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 STK36Q9NRP7 1315 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 MYCLP12524 364 aaPredicted RBP17.13■□□□□ 0.33
FGFR2-222ENST00000604236 TRIM65Q6PJ69 517 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 KLHL7Q8IXQ5 586 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 LRRC15Q8TF66 581 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 ZNF446Q9NWS9 450 aa17.13■□□□□ 0.33
FGFR2-222ENST00000604236 SMIM23A6NLE4 172 aa17.12■□□□□ 0.33
FGFR2-222ENST00000604236 BMP15O95972 392 aa17.12■□□□□ 0.33
FGFR2-222ENST00000604236 ACTN1P12814 892 aa17.12■□□□□ 0.33
FGFR2-222ENST00000604236 DGKHQ86XP1 1220 aa17.12■□□□□ 0.33
FGFR2-222ENST00000604236 GOLGA6L1Q8N7Z2 621 aa17.12■□□□□ 0.33
FGFR2-222ENST00000604236 LARP4BQ92615 738 aaKnown RBP17.12■□□□□ 0.33
FGFR2-222ENST00000604236 RTFDC1Q9BY42 306 aaPredicted RBP17.12■□□□□ 0.33
FGFR2-222ENST00000604236 AKAP11Q9UKA4 1901 aa17.12■□□□□ 0.33
FGFR2-222ENST00000604236 XIRP1Q702N8 1843 aaKnown RBP17.12■□□□□ 0.33
FGFR2-222ENST00000604236 PSDA5PKW4 1024 aaPredicted RBP17.12■□□□□ 0.33
FGFR2-222ENST00000604236 PDHBP11177 359 aa17.12■□□□□ 0.33
FGFR2-222ENST00000604236 EN1Q05925 392 aaPredicted RBP17.12■□□□□ 0.33
FGFR2-222ENST00000604236 GFPT1Q06210 699 aaPredicted RBP17.12■□□□□ 0.33
FGFR2-222ENST00000604236 HLTFQ14527 1009 aaKnown RBP eCLIP17.12■□□□□ 0.33
FGFR2-222ENST00000604236 CYP26C1Q6V0L0 522 aa17.12■□□□□ 0.33
FGFR2-222ENST00000604236 NAPGQ99747 312 aaPredicted RBP17.12■□□□□ 0.33
FGFR2-222ENST00000604236 PCIF1Q9H4Z3 704 aa17.12■□□□□ 0.33
FGFR2-222ENST00000604236 GCNT3O95395 438 aa17.12■□□□□ 0.33
FGFR2-222ENST00000604236 ATP1A1P05023 1023 aaKnown RBP17.12■□□□□ 0.33
FGFR2-222ENST00000604236 CDC42EP5Q6NZY7 148 aa17.12■□□□□ 0.33
FGFR2-222ENST00000604236 LARGE2Q8N3Y3 721 aa17.12■□□□□ 0.33
FGFR2-222ENST00000604236 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.12■□□□□ 0.33
FGFR2-222ENST00000604236 ATP2B4P23634 1241 aa17.11■□□□□ 0.33
FGFR2-222ENST00000604236 AMPD3Q01432 767 aa17.11■□□□□ 0.33
FGFR2-222ENST00000604236 FGFBP2Q9BYJ0 223 aa17.11■□□□□ 0.33
FGFR2-222ENST00000604236 ATF5Q9Y2D1 282 aaPredicted RBP17.11■□□□□ 0.33
FGFR2-222ENST00000604236 ZSCAN20P17040 1043 aaPredicted RBP17.11■□□□□ 0.33
FGFR2-222ENST00000604236 GUCY2FP51841 1108 aa17.11■□□□□ 0.33
FGFR2-222ENST00000604236 QRICH1Q2TAL8 776 aa17.11■□□□□ 0.33
FGFR2-222ENST00000604236 UTP14CQ5TAP6 766 aaKnown RBP17.11■□□□□ 0.33
FGFR2-222ENST00000604236 KRT25Q7Z3Z0 450 aa17.11■□□□□ 0.33
FGFR2-222ENST00000604236 SYCP3Q8IZU3 236 aa17.11■□□□□ 0.33
FGFR2-222ENST00000604236 ZNF668Q96K58 619 aaPredicted RBP17.11■□□□□ 0.33
FGFR2-222ENST00000604236 ABCB6Q9NP58 842 aa17.11■□□□□ 0.33
FGFR2-222ENST00000604236 ADAMTS1Q9UHI8 967 aa17.11■□□□□ 0.33
FGFR2-222ENST00000604236 EPHB6O15197 1021 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 NDUFA10O95299 355 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 HARSP12081 509 aaKnown RBP17.1■□□□□ 0.33
FGFR2-222ENST00000604236 ERCC5P28715 1186 aaPredicted RBP17.1■□□□□ 0.33
FGFR2-222ENST00000604236 SMC1AQ14683 1233 aaKnown RBP17.1■□□□□ 0.33
FGFR2-222ENST00000604236 UHMK1Q8TAS1 419 aaKnown RBP17.1■□□□□ 0.33
FGFR2-222ENST00000604236 P2RX5Q93086 422 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 MS4A14Q96JA4 679 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 PANK4Q9NVE7 773 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 USP20Q9Y2K6 914 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 MYH7P12883 1935 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 EIF4A3P38919 411 aaKnown RBP17.1■□□□□ 0.33
FGFR2-222ENST00000604236 CRKP46108 304 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 MRPL12P52815 198 aaKnown RBP17.1■□□□□ 0.33
FGFR2-222ENST00000604236 GRM4Q14833 912 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 NAALADL2Q58DX5 795 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 KCTD16Q68DU8 428 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 NSMFQ6X4W1 530 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 FAM133AQ8N9E0 248 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 LSM14BQ9BX40 385 aaKnown RBP17.1■□□□□ 0.33
FGFR2-222ENST00000604236 IFIH1Q9BYX4 1025 aaKnown RBP17.1■□□□□ 0.33
FGFR2-222ENST00000604236 RAB34Q9BZG1 259 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 TRIM9Q9C026 710 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 BHMT2Q9H2M3 363 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 RSPH10B2B2RC85 870 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 RSPH10BP0C881 870 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 SSTR3P32745 418 aaPredicted RBP17.1■□□□□ 0.33
FGFR2-222ENST00000604236 LONP1P36776 959 aaKnown RBP17.1■□□□□ 0.33
FGFR2-222ENST00000604236 MAGEA1P43355 309 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 PSMC6P62333 389 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 COL23A1Q86Y22 540 aaPredicted RBP17.1■□□□□ 0.33
FGFR2-222ENST00000604236 SLF2Q8IX21 1173 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 MB21D1Q8N884 522 aa17.1■□□□□ 0.33
FGFR2-222ENST00000604236 ORC4O43929 436 aa17.09■□□□□ 0.33
FGFR2-222ENST00000604236 LRRN2O75325 713 aa17.09■□□□□ 0.33
FGFR2-222ENST00000604236 TTLL1O95922 423 aa17.09■□□□□ 0.33
FGFR2-222ENST00000604236 ANKRD7Q92527 254 aa17.09■□□□□ 0.33
FGFR2-222ENST00000604236 SHANK3Q9BYB0 1731 aa17.09■□□□□ 0.33
FGFR2-222ENST00000604236 MTMR4Q9NYA4 1195 aa17.09■□□□□ 0.33
FGFR2-222ENST00000604236 A0A1B0GTH6 734 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms