RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 PFKFB2O60825 505 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 HIP1RO75146 1068 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 ASLP04424 464 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 NOS1P29475 1434 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 SLC16A2P36021 539 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 GNG11P61952 73 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 PPP4R3AQ6IN85 833 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 LVRNQ6Q4G3 990 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 CASZ1Q86V15 1759 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 ABCA9Q8IUA7 1624 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.72□□□□□ -0.85
COMMD3-215ENST00000602574 ANKRD49Q8WVL7 239 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 CEP63Q96MT8 703 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 CARD14Q9BXL6 1004 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 DNAJC25Q9H1X3 360 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 GBA3Q9H227 469 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 PFDN4Q9NQP4 134 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 XPO7Q9UIA9 1087 aaKnown RBP9.72□□□□□ -0.85
COMMD3-215ENST00000602574 AMOTL2Q9Y2J4 779 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 PPP2R2CQ9Y2T4 447 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 EMILIN1Q9Y6C2 1016 aa9.72□□□□□ -0.85
COMMD3-215ENST00000602574 EFCAB6Q5THR3 1501 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 ASXL2Q76L83 1435 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 STRNO43815 780 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 ITGA2BP08514 1039 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 EIF2S2P20042 333 aaKnown RBP9.71□□□□□ -0.85
COMMD3-215ENST00000602574 GPC3P51654 580 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 HSPA14Q0VDF9 509 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 DPYSQ14117 519 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 PPP2R5BQ15173 497 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 HIBCHQ6NVY1 386 aaPredicted RBP9.71□□□□□ -0.85
COMMD3-215ENST00000602574 PHLDB2Q86SQ0 1253 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 ZNF598Q86UK7 904 aaKnown RBP9.71□□□□□ -0.85
COMMD3-215ENST00000602574 SCUBE1Q8IWY4 988 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 CCDC146Q8IYE0 955 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 LILRB2Q8N423 598 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 CCDC63Q8NA47 563 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 GOLM1Q8NBJ4 401 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 ATP8B4Q8TF62 1192 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 SLC16A10Q8TF71 515 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 WDR24Q96S15 920 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 PRPF18Q99633 342 aaKnown RBP9.71□□□□□ -0.85
COMMD3-215ENST00000602574 DISC1Q9NRI5 854 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 SAMSN1Q9NSI8 373 aaKnown RBP9.71□□□□□ -0.85
COMMD3-215ENST00000602574 CCDC87Q9NVE4 849 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 FAIMQ9NVQ4 179 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 EURLQ9NYK6 297 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 HERC5Q9UII4 1024 aaKnown RBP9.71□□□□□ -0.85
COMMD3-215ENST00000602574 SCOCQ9UIL1 159 aa9.71□□□□□ -0.85
COMMD3-215ENST00000602574 PLEKHG1Q9ULL1 1385 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 CTAGE15A4D2H0 777 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 FIBPO43427 364 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 IDH3BO43837 385 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 CTAGE8P0CG41 777 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 TNNI2P48788 182 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 HDGFP51858 240 aaKnown RBP9.71□□□□□ -0.86
COMMD3-215ENST00000602574 IKQ13123 557 aaPredicted RBP9.71□□□□□ -0.86
COMMD3-215ENST00000602574 TWF2Q6IBS0 349 aaKnown RBP9.71□□□□□ -0.86
COMMD3-215ENST00000602574 DUS1LQ6P1R4 473 aaKnown RBP9.71□□□□□ -0.86
COMMD3-215ENST00000602574 C14orf80Q86SX3 495 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 CTAGE6Q86UF2 777 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 CTAGE4Q8IX94 777 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 GSDMBQ8TAX9 411 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 CCT6BQ92526 530 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 CYFIP2Q96F07 1278 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 CDHR1Q96JP9 859 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 GPR101Q96P66 508 aaPredicted RBP9.71□□□□□ -0.86
COMMD3-215ENST00000602574 UQCC2Q9BRT2 126 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 SIKE1Q9BRV8 207 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 FAM167BQ9BTA0 163 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 KLHL42Q9P2K6 505 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 SLC12A4Q9UP95 1085 aa9.71□□□□□ -0.86
COMMD3-215ENST00000602574 TTC21AQ8NDW8 1320 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 LOC105371267A0A1B0GV96 52 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 MATN2O00339 956 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 HNRNPRO43390 633 aaKnown RBP9.7□□□□□ -0.86
COMMD3-215ENST00000602574 STX6O43752 255 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 B4GALT4O60513 344 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 SNX2O60749 519 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 LCA5LO95447 670 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 BTF3P20290 206 aaKnown RBP9.7□□□□□ -0.86
COMMD3-215ENST00000602574 LIFRP42702 1097 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 TUBP50607 506 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 DNM1Q05193 864 aaKnown RBP9.7□□□□□ -0.86
COMMD3-215ENST00000602574 LMOD2Q6P5Q4 547 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 TMEM154Q6P9G4 183 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 RUFY4Q6ZNE9 571 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 MCF2L2Q86YR7 1114 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 NOA1Q8NC60 698 aaKnown RBP9.7□□□□□ -0.86
COMMD3-215ENST00000602574 CCDC148Q8NFR7 591 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 NEUROD6Q96NK8 337 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 HSFX1Q9UBD0 423 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 KLF15Q9UIH9 416 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 ASAP1Q9ULH1 1129 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 PCDHGB3Q9Y5G1 929 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 NUMBLQ9Y6R0 609 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 TACC1O75410 805 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 SERPINB7O75635 380 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 CDC25CP30307 473 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 E2F2Q14209 437 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms