RNA–Protein interactions for RNA: ENST00000594417.1

ARHGEF1-208, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-208ENST00000594417 PCDHA1Q9Y5I3 950 aa16.16■□□□□ 0.18
ARHGEF1-208ENST00000594417 GRIN2DO15399 1336 aa16.16■□□□□ 0.18
ARHGEF1-208ENST00000594417 PALM3A6NDB9 673 aaPredicted RBP16.15■□□□□ 0.18
ARHGEF1-208ENST00000594417 ZBTB5O15062 677 aa16.15■□□□□ 0.18
ARHGEF1-208ENST00000594417 SUPT20HL2P0C7V6 817 aa16.15■□□□□ 0.18
ARHGEF1-208ENST00000594417 ACRP10323 421 aa16.15■□□□□ 0.18
ARHGEF1-208ENST00000594417 CHMP4BP1P59074 171 aa16.15■□□□□ 0.18
ARHGEF1-208ENST00000594417 PURAQ00577 322 aaKnown RBP16.15■□□□□ 0.18
ARHGEF1-208ENST00000594417 FAM47CQ5HY64 1035 aa16.15■□□□□ 0.18
ARHGEF1-208ENST00000594417 TMEM67Q5HYA8 995 aa16.15■□□□□ 0.18
ARHGEF1-208ENST00000594417 CHST3Q7LGC8 479 aa16.15■□□□□ 0.18
ARHGEF1-208ENST00000594417 CATIPQ7Z7H3 387 aa16.15■□□□□ 0.18
ARHGEF1-208ENST00000594417 HOMER1Q86YM7 354 aa16.15■□□□□ 0.18
ARHGEF1-208ENST00000594417 COPS5Q92905 334 aa16.15■□□□□ 0.18
ARHGEF1-208ENST00000594417 MAP4K1Q92918 833 aa16.15■□□□□ 0.18
ARHGEF1-208ENST00000594417 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.15■□□□□ 0.18
ARHGEF1-208ENST00000594417 ALDH8A1Q9H2A2 487 aaPredicted RBP16.15■□□□□ 0.18
ARHGEF1-208ENST00000594417 B4GALT4O60513 344 aa16.14■□□□□ 0.17
ARHGEF1-208ENST00000594417 EIF2AK2P19525 551 aaKnown RBP16.14■□□□□ 0.17
ARHGEF1-208ENST00000594417 CCL23P55773 120 aa16.14■□□□□ 0.17
ARHGEF1-208ENST00000594417 GRM4Q14833 912 aa16.14■□□□□ 0.17
ARHGEF1-208ENST00000594417 TMEM240Q5SV17 173 aa16.14■□□□□ 0.17
ARHGEF1-208ENST00000594417 PSRC1Q6PGN9 363 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF1-208ENST00000594417 ZNF365Q70YC5 407 aa16.14■□□□□ 0.17
ARHGEF1-208ENST00000594417 GUCD1Q96NT3 240 aa16.14■□□□□ 0.17
ARHGEF1-208ENST00000594417 IL23AQ9NPF7 189 aa16.14■□□□□ 0.17
ARHGEF1-208ENST00000594417 COL20A1Q9P218 1284 aa16.14■□□□□ 0.17
ARHGEF1-208ENST00000594417 RBM8AQ9Y5S9 174 aaKnown RBP16.14■□□□□ 0.17
ARHGEF1-208ENST00000594417 LAMA3Q16787 3333 aa16.14■□□□□ 0.17
ARHGEF1-208ENST00000594417 A6NJR5 290 aa16.13■□□□□ 0.17
ARHGEF1-208ENST00000594417 EIF3JO75822 258 aaKnown RBP16.13■□□□□ 0.17
ARHGEF1-208ENST00000594417 GH1P01241 217 aa16.13■□□□□ 0.17
ARHGEF1-208ENST00000594417 FGBP02675 491 aa16.13■□□□□ 0.17
ARHGEF1-208ENST00000594417 LY6KQ17RY6 165 aa16.13■□□□□ 0.17
ARHGEF1-208ENST00000594417 NBPF20Q3BBV1 942 aa16.13■□□□□ 0.17
ARHGEF1-208ENST00000594417 CASC1Q6TDU7 716 aa16.13■□□□□ 0.17
ARHGEF1-208ENST00000594417 C16orf59Q7L2K0 433 aa16.13■□□□□ 0.17
ARHGEF1-208ENST00000594417 CDX2Q99626 313 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF1-208ENST00000594417 MTIF3Q9H2K0 278 aaKnown RBP16.13■□□□□ 0.17
ARHGEF1-208ENST00000594417 TAF6LQ9Y6J9 622 aa16.13■□□□□ 0.17
ARHGEF1-208ENST00000594417 ARIH2O95376 493 aa16.12■□□□□ 0.17
ARHGEF1-208ENST00000594417 NR3C2P08235 984 aa16.12■□□□□ 0.17
ARHGEF1-208ENST00000594417 MYCLP12524 364 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF1-208ENST00000594417 NFXL1Q6ZNB6 911 aa16.12■□□□□ 0.17
ARHGEF1-208ENST00000594417 RPUSD2Q8IZ73 545 aaKnown RBP16.12■□□□□ 0.17
ARHGEF1-208ENST00000594417 SAMD3Q8N6K7 520 aa16.12■□□□□ 0.17
ARHGEF1-208ENST00000594417 AFG1LQ8WV93 481 aa16.12■□□□□ 0.17
ARHGEF1-208ENST00000594417 MTMR8Q96EF0 704 aa16.12■□□□□ 0.17
ARHGEF1-208ENST00000594417 PIGSQ96S52 555 aa16.12■□□□□ 0.17
ARHGEF1-208ENST00000594417 NOC4LQ9BVI4 516 aaKnown RBP16.12■□□□□ 0.17
ARHGEF1-208ENST00000594417 SENP2Q9HC62 589 aa16.12■□□□□ 0.17
ARHGEF1-208ENST00000594417 PXMP2Q9NR77 195 aa16.12■□□□□ 0.17
ARHGEF1-208ENST00000594417 TRMT13Q9NUP7 481 aaKnown RBP16.12■□□□□ 0.17
ARHGEF1-208ENST00000594417 MAP3K20Q9NYL2 800 aaKnown RBP16.12■□□□□ 0.17
ARHGEF1-208ENST00000594417 NOD1Q9Y239 953 aa16.12■□□□□ 0.17
ARHGEF1-208ENST00000594417 MRVI1Q9Y6F6 885 aa16.12■□□□□ 0.17
ARHGEF1-208ENST00000594417 PNMA6FA0A0J9YX94 578 aa16.11■□□□□ 0.17
ARHGEF1-208ENST00000594417 GCOM1H8Y6P7 765 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF1-208ENST00000594417 POLR2MP0CAP2 368 aa16.11■□□□□ 0.17
ARHGEF1-208ENST00000594417 CYP2C9P11712 490 aa16.11■□□□□ 0.17
ARHGEF1-208ENST00000594417 HOXA13P31271 388 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF1-208ENST00000594417 HSD17B4P51659 736 aa16.11■□□□□ 0.17
ARHGEF1-208ENST00000594417 CCDC62Q6P9F0 684 aa16.11■□□□□ 0.17
ARHGEF1-208ENST00000594417 STOX1Q6ZVD7 989 aa16.11■□□□□ 0.17
ARHGEF1-208ENST00000594417 RETREG2Q8NC44 543 aa16.11■□□□□ 0.17
ARHGEF1-208ENST00000594417 IGDCC4Q8TDY8 1250 aa16.11■□□□□ 0.17
ARHGEF1-208ENST00000594417 PIBF1Q8WXW3 757 aa16.11■□□□□ 0.17
ARHGEF1-208ENST00000594417 RIOX1Q9H6W3 641 aa16.11■□□□□ 0.17
ARHGEF1-208ENST00000594417 UMODL1Q5DID0 1318 aa16.11■□□□□ 0.17
ARHGEF1-208ENST00000594417 TMEM265A0A087WTH1 108 aa16.1■□□□□ 0.17
ARHGEF1-208ENST00000594417 PPP1R11O60927 126 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF1-208ENST00000594417 CASTP20810 708 aaKnown RBP16.1■□□□□ 0.17
ARHGEF1-208ENST00000594417 DNAJB2P25686 324 aa16.1■□□□□ 0.17
ARHGEF1-208ENST00000594417 KIF5BP33176 963 aa16.1■□□□□ 0.17
ARHGEF1-208ENST00000594417 TROAPQ12815 778 aa16.1■□□□□ 0.17
ARHGEF1-208ENST00000594417 NFRKBQ6P4R8 1299 aa16.1■□□□□ 0.17
ARHGEF1-208ENST00000594417 FCHSD1Q86WN1 690 aa16.1■□□□□ 0.17
ARHGEF1-208ENST00000594417 TMTC2Q8N394 836 aa16.1■□□□□ 0.17
ARHGEF1-208ENST00000594417 CTCFLQ8NI51 663 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF1-208ENST00000594417 TIFAQ96CG3 184 aa16.1■□□□□ 0.17
ARHGEF1-208ENST00000594417 TTYH1Q9H313 450 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF1-208ENST00000594417 DDX41Q9UJV9 622 aaKnown RBP16.1■□□□□ 0.17
ARHGEF1-208ENST00000594417 CCDC69A6NI79 296 aa16.09■□□□□ 0.17
ARHGEF1-208ENST00000594417 PRC1O43663 620 aa16.09■□□□□ 0.17
ARHGEF1-208ENST00000594417 MCM5P33992 734 aa16.09■□□□□ 0.17
ARHGEF1-208ENST00000594417 ANTXR2P58335 489 aa16.09■□□□□ 0.17
ARHGEF1-208ENST00000594417 PTPN11Q06124 597 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF1-208ENST00000594417 LAMC2Q13753 1193 aa16.09■□□□□ 0.17
ARHGEF1-208ENST00000594417 DGKDQ16760 1214 aa16.09■□□□□ 0.17
ARHGEF1-208ENST00000594417 OTOP2Q7RTS6 562 aa16.09■□□□□ 0.17
ARHGEF1-208ENST00000594417 DHX37Q8IY37 1157 aaKnown RBP16.09■□□□□ 0.17
ARHGEF1-208ENST00000594417 MB21D2Q8IYB1 491 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF1-208ENST00000594417 PPP1R13LQ8WUF5 828 aa16.09■□□□□ 0.17
ARHGEF1-208ENST00000594417 MYLIPQ8WY64 445 aa16.09■□□□□ 0.17
ARHGEF1-208ENST00000594417 HERVK_113Q902F9 699 aa16.09■□□□□ 0.17
ARHGEF1-208ENST00000594417 ESYT1Q9BSJ8 1104 aa16.09■□□□□ 0.17
ARHGEF1-208ENST00000594417 ANO2Q9NQ90 1003 aa16.09■□□□□ 0.17
ARHGEF1-208ENST00000594417 MSRAQ9UJ68 235 aa16.09■□□□□ 0.17
ARHGEF1-208ENST00000594417 GRXCR1A8MXD5 290 aa16.08■□□□□ 0.16
ARHGEF1-208ENST00000594417 OPLAHO14841 1288 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms