RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 HOXA13P31271 388 aaPredicted RBP15.96■□□□□ 0.15
NEDD4L-228ENST00000590248 MCM5P33992 734 aa15.96■□□□□ 0.15
NEDD4L-228ENST00000590248 EPHB4P54760 987 aa15.96■□□□□ 0.15
NEDD4L-228ENST00000590248 PWP2Q15269 919 aaKnown RBP15.96■□□□□ 0.15
NEDD4L-228ENST00000590248 LRIT3Q3SXY7 679 aa15.96■□□□□ 0.15
NEDD4L-228ENST00000590248 CASC1Q6TDU7 716 aa15.96■□□□□ 0.15
NEDD4L-228ENST00000590248 SEPT14Q6ZU15 432 aa15.96■□□□□ 0.15
NEDD4L-228ENST00000590248 ZNF654Q8IZM8 581 aa15.96■□□□□ 0.15
NEDD4L-228ENST00000590248 CMTR1Q8N1G2 835 aaKnown RBP15.96■□□□□ 0.15
NEDD4L-228ENST00000590248 MPHOSPH6Q99547 160 aaKnown RBP15.96■□□□□ 0.15
NEDD4L-228ENST00000590248 SH2B2O14492 632 aaPredicted RBP15.95■□□□□ 0.14
NEDD4L-228ENST00000590248 TXNP10599 105 aaKnown RBP15.95■□□□□ 0.14
NEDD4L-228ENST00000590248 ITGA7Q13683 1181 aa15.95■□□□□ 0.14
NEDD4L-228ENST00000590248 ARHGEF16Q5VV41 709 aa15.95■□□□□ 0.14
NEDD4L-228ENST00000590248 NFXL1Q6ZNB6 911 aa15.95■□□□□ 0.14
NEDD4L-228ENST00000590248 FAM126BQ8IXS8 530 aa15.95■□□□□ 0.14
NEDD4L-228ENST00000590248 NSUN6Q8TEA1 469 aaKnown RBP15.95■□□□□ 0.14
NEDD4L-228ENST00000590248 ZFP91Q96JP5 570 aaPredicted RBP15.95■□□□□ 0.14
NEDD4L-228ENST00000590248 TCEANC2Q96MN5 208 aa15.95■□□□□ 0.14
NEDD4L-228ENST00000590248 TRIP12Q14669 1992 aaPredicted RBP15.95■□□□□ 0.14
NEDD4L-228ENST00000590248 B4DLN1 442 aa15.94■□□□□ 0.14
NEDD4L-228ENST00000590248 ZEB2O60315 1214 aa15.94■□□□□ 0.14
NEDD4L-228ENST00000590248 CDC45O75419 566 aa15.94■□□□□ 0.14
NEDD4L-228ENST00000590248 MYL3P08590 195 aa15.94■□□□□ 0.14
NEDD4L-228ENST00000590248 HSD17B4P51659 736 aa15.94■□□□□ 0.14
NEDD4L-228ENST00000590248 MRPL12P52815 198 aaKnown RBP15.94■□□□□ 0.14
NEDD4L-228ENST00000590248 PPP2R5BQ15173 497 aa15.94■□□□□ 0.14
NEDD4L-228ENST00000590248 LY6KQ17RY6 165 aa15.94■□□□□ 0.14
NEDD4L-228ENST00000590248 Q7L0L9 218 aa15.94■□□□□ 0.14
NEDD4L-228ENST00000590248 RASEFQ8IZ41 740 aa15.94■□□□□ 0.14
NEDD4L-228ENST00000590248 SCFD2Q8WU76 684 aa15.94■□□□□ 0.14
NEDD4L-228ENST00000590248 PXMP2Q9NR77 195 aa15.94■□□□□ 0.14
NEDD4L-228ENST00000590248 TBX21Q9UL17 535 aa15.94■□□□□ 0.14
NEDD4L-228ENST00000590248 DOCK5Q9H7D0 1870 aa15.94■□□□□ 0.14
NEDD4L-228ENST00000590248 LAMA2P24043 3122 aaKnown RBP15.94■□□□□ 0.14
NEDD4L-228ENST00000590248 MROH7Q68CQ1 1323 aa15.94■□□□□ 0.14
NEDD4L-228ENST00000590248 PNMA6FA0A0J9YX94 578 aa15.93■□□□□ 0.14
NEDD4L-228ENST00000590248 CCDC69A6NI79 296 aa15.93■□□□□ 0.14
NEDD4L-228ENST00000590248 PLEKHA8P1O95397 391 aa15.93■□□□□ 0.14
NEDD4L-228ENST00000590248 TIMP1P01033 207 aa15.93■□□□□ 0.14
NEDD4L-228ENST00000590248 CD4P01730 458 aa15.93■□□□□ 0.14
NEDD4L-228ENST00000590248 NR3C2P08235 984 aa15.93■□□□□ 0.14
NEDD4L-228ENST00000590248 MYCLP12524 364 aaPredicted RBP15.93■□□□□ 0.14
NEDD4L-228ENST00000590248 STXBP2Q15833 593 aa15.93■□□□□ 0.14
NEDD4L-228ENST00000590248 FCHSD1Q86WN1 690 aa15.93■□□□□ 0.14
NEDD4L-228ENST00000590248 SLC43A3Q8NBI5 491 aa15.93■□□□□ 0.14
NEDD4L-228ENST00000590248 CTCFLQ8NI51 663 aaPredicted RBP15.93■□□□□ 0.14
NEDD4L-228ENST00000590248 TMEM87BQ96K49 555 aa15.93■□□□□ 0.14
NEDD4L-228ENST00000590248 PPP1R12CQ9BZL4 782 aa15.93■□□□□ 0.14
NEDD4L-228ENST00000590248 TRPV6Q9H1D0 765 aa15.93■□□□□ 0.14
NEDD4L-228ENST00000590248 SCN10AQ9Y5Y9 1956 aa15.93■□□□□ 0.14
NEDD4L-228ENST00000590248 hCG_1642624A0A1W2PR95 340 aa15.92■□□□□ 0.14
NEDD4L-228ENST00000590248 CABYRO75952 493 aa15.92■□□□□ 0.14
NEDD4L-228ENST00000590248 DDAH1O94760 285 aa15.92■□□□□ 0.14
NEDD4L-228ENST00000590248 PURAQ00577 322 aaKnown RBP15.92■□□□□ 0.14
NEDD4L-228ENST00000590248 TTLL4Q14679 1199 aa15.92■□□□□ 0.14
NEDD4L-228ENST00000590248 ADCK5Q3MIX3 580 aa15.92■□□□□ 0.14
NEDD4L-228ENST00000590248 CCDC62Q6P9F0 684 aa15.92■□□□□ 0.14
NEDD4L-228ENST00000590248 CCDC82Q8N4S0 544 aa15.92■□□□□ 0.14
NEDD4L-228ENST00000590248 SRBD1Q8N5C6 995 aaKnown RBP15.92■□□□□ 0.14
NEDD4L-228ENST00000590248 NEK1Q96PY6 1258 aa15.92■□□□□ 0.14
NEDD4L-228ENST00000590248 IWS1Q96ST2 819 aa15.92■□□□□ 0.14
NEDD4L-228ENST00000590248 SCN5AQ14524 2016 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 GCOM1H8Y6P7 765 aaPredicted RBP15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 TLR3O15455 904 aaKnown RBP15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 SORBS3O60504 671 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 B4GALT4O60513 344 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 POLR2MP0CAP2 368 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 CYP2C18P33260 490 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 LIFRP42702 1097 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 CPT1AP50416 773 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 CHMP4BP1P59074 171 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 GHRHRQ02643 423 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 FPGSQ05932 587 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 RNF20Q5VTR2 975 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 TMTC2Q8N394 836 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 IL31RAQ8NI17 732 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 MAP3K14Q99558 947 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 PDCD2LQ9BRP1 358 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 MTA3Q9BTC8 594 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 MAF1Q9H063 256 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 UMODL1Q5DID0 1318 aa15.91■□□□□ 0.14
NEDD4L-228ENST00000590248 A6NJR5 290 aa15.9■□□□□ 0.14
NEDD4L-228ENST00000590248 NKRFO15226 690 aaKnown RBP eCLIP15.9■□□□□ 0.14
NEDD4L-228ENST00000590248 EIF3JO75822 258 aaKnown RBP15.9■□□□□ 0.14
NEDD4L-228ENST00000590248 ACRP10323 421 aa15.9■□□□□ 0.14
NEDD4L-228ENST00000590248 CPA1P15085 419 aa15.9■□□□□ 0.14
NEDD4L-228ENST00000590248 KIF5BP33176 963 aa15.9■□□□□ 0.14
NEDD4L-228ENST00000590248 PGM5Q15124 567 aa15.9■□□□□ 0.14
NEDD4L-228ENST00000590248 AFG1LQ8WV93 481 aa15.9■□□□□ 0.14
NEDD4L-228ENST00000590248 POLR3EQ9NVU0 708 aa15.9■□□□□ 0.14
NEDD4L-228ENST00000590248 DDX41Q9UJV9 622 aaKnown RBP15.9■□□□□ 0.14
NEDD4L-228ENST00000590248 SLC12A7Q9Y666 1083 aa15.9■□□□□ 0.14
NEDD4L-228ENST00000590248 RGS20O76081 388 aa15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 CSF2RAP15509 400 aa15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 EXOSC10Q01780 885 aaKnown RBP15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 ARHGAP1Q07960 439 aa15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 NBPF20Q3BBV1 942 aa15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 FAM47CQ5HY64 1035 aa15.89■□□□□ 0.13
NEDD4L-228ENST00000590248 MFSD5Q6N075 450 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms