RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 NAALADL2Q58DX5 795 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 MOXD1Q6UVY6 613 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 ZNF771Q7L3S4 317 aaPredicted RBP7.99□□□□□ -1.13
SPIDR-228ENST00000588781 NLGN1Q8N2Q7 840 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 CCDC24Q8N4L8 307 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 SLC44A5Q8NCS7 719 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 ERMNQ8TAM6 284 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 DCAF4Q8WV16 495 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 LARP4BQ92615 738 aaKnown RBP7.99□□□□□ -1.13
SPIDR-228ENST00000588781 RUBCNQ92622 972 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 TEKT1Q969V4 418 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 CNOT6LQ96LI5 555 aaKnown RBP7.99□□□□□ -1.13
SPIDR-228ENST00000588781 ERGIC2Q96RQ1 377 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 WDR24Q96S15 920 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 PIGSQ96S52 555 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 EIF3CQ99613 913 aaKnown RBP7.99□□□□□ -1.13
SPIDR-228ENST00000588781 MTRQ99707 1265 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 DESI2Q9BSY9 194 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 NOC4LQ9BVI4 516 aaKnown RBP7.99□□□□□ -1.13
SPIDR-228ENST00000588781 MRPL44Q9H9J2 332 aaKnown RBP7.99□□□□□ -1.13
SPIDR-228ENST00000588781 SERPINB13Q9UIV8 391 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 MTMR7Q9Y216 660 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 ATP6V0A2Q9Y487 856 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 DAGLAQ9Y4D2 1042 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 MYH1P12882 1939 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 PCNTO95613 3336 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 ANO9A1A5B4 782 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 USP17L5A8MUK1 530 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 PSMD14O00487 310 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 NPM3O75607 178 aaKnown RBP7.98□□□□□ -1.13
SPIDR-228ENST00000588781 ZRANB2O95218 330 aaKnown RBP eCLIP7.98□□□□□ -1.13
SPIDR-228ENST00000588781 GOLGA8HP0CJ92 632 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 PNMA6AP0CW24 399 aaPredicted RBP7.98□□□□□ -1.13
SPIDR-228ENST00000588781 TECP42680 631 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 GTF2IP78347 998 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 GABPAQ06546 454 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 ZNF543Q08ER8 600 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 AP3B2Q13367 1082 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 MAN2A1Q16706 1144 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 CCDC96Q2M329 555 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 SLC4A8Q2Y0W8 1093 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 CENPPQ6IPU0 288 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 TYW1BQ6NUM6 668 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 USP17L2Q6R6M4 530 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 HDXQ7Z353 690 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 ZSCAN29Q8IWY8 852 aaPredicted RBP7.98□□□□□ -1.13
SPIDR-228ENST00000588781 CCDC65Q8IXS2 484 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 SLFN12Q8IYM2 578 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 SLC35F6Q8N357 371 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 CCDC155Q8N6L0 562 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 MSANTD4Q8NCY6 345 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 ZNF507Q8TCN5 953 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 RAD54LQ92698 747 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 CEP63Q96MT8 703 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 MTMR9Q96QG7 549 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 VAT1LQ9HCJ6 419 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 USP40Q9NVE5 1235 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 MYO6Q9UM54 1294 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 SYNPO2Q9UMS6 1093 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 FOCADQ5VW36 1801 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 QSER1Q2KHR3 1735 aa7.98□□□□□ -1.13
SPIDR-228ENST00000588781 TTC26A0AVF1 554 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 POLRMTO00411 1230 aaKnown RBP7.97□□□□□ -1.13
SPIDR-228ENST00000588781 ZBTB5O15062 677 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 TACC1O75410 805 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 FOSP01100 380 aaPredicted RBP7.97□□□□□ -1.13
SPIDR-228ENST00000588781 VEGFAP15692 232 aaPredicted RBP7.97□□□□□ -1.13
SPIDR-228ENST00000588781 TXKP42681 527 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 TNNI2P48788 182 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 USP11P51784 963 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 ERVK-24P63145 666 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 EVX2Q03828 476 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 KIF5AQ12840 1032 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 MTF1Q14872 753 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 TMEM119Q4V9L6 283 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 VWA3BQ502W6 1294 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 CCDC122Q5T0U0 273 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 HAUS3Q68CZ6 603 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 CC2D1AQ6P1N0 951 aaPredicted RBP7.97□□□□□ -1.13
SPIDR-228ENST00000588781 DPP8Q6V1X1 898 aaPredicted RBP7.97□□□□□ -1.13
SPIDR-228ENST00000588781 PPP4R3CPQ6ZMV5 832 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 PODNQ7Z5L7 613 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 IRF2BP1Q8IU81 584 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 DNAJC5GQ8N7S2 189 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 SNX29Q8TEQ0 813 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 JAKMIP2Q96AA8 810 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 CCDC42Q96M95 316 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 ALS2CR12Q96Q35 445 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 DUSP9Q99956 384 aaKnown RBP7.97□□□□□ -1.13
SPIDR-228ENST00000588781 SLF1Q9BQI6 1058 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 NYAP2Q9P242 653 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 BIN2Q9UBW5 565 aaPredicted RBP7.97□□□□□ -1.13
SPIDR-228ENST00000588781 POLLQ9UGP5 575 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 DDX25Q9UHL0 483 aaKnown RBP7.97□□□□□ -1.13
SPIDR-228ENST00000588781 TSKSQ9UJT2 592 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 RAB21Q9UL25 225 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 UBR3Q6ZT12 1888 aa7.97□□□□□ -1.13
SPIDR-228ENST00000588781 CDK5RAP2Q96SN8 1893 aa7.96□□□□□ -1.13
SPIDR-228ENST00000588781 TRIM49BA6NDI0 452 aa7.96□□□□□ -1.14
SPIDR-228ENST00000588781 PP2D1A8MPX8 630 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms