RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 FAM126BQ8IXS8 530 aa20.94■□□□□ 0.94
SRSF1-208ENST00000584773 ZNF654Q8IZM8 581 aa20.94■□□□□ 0.94
SRSF1-208ENST00000584773 CCDC136Q96JN2 1154 aa20.94■□□□□ 0.94
SRSF1-208ENST00000584773 RMDN3Q96TC7 470 aa20.94■□□□□ 0.94
SRSF1-208ENST00000584773 TBX21Q9UL17 535 aa20.94■□□□□ 0.94
SRSF1-208ENST00000584773 Q9Y3F1 56 aa20.94■□□□□ 0.94
SRSF1-208ENST00000584773 PCDHA1Q9Y5I3 950 aa20.94■□□□□ 0.94
SRSF1-208ENST00000584773 KIAA1217Q5T5P2 1943 aa20.94■□□□□ 0.94
SRSF1-208ENST00000584773 HOXA13P31271 388 aaPredicted RBP20.93■□□□□ 0.94
SRSF1-208ENST00000584773 PPP2R5BQ15173 497 aa20.93■□□□□ 0.94
SRSF1-208ENST00000584773 CASC1Q6TDU7 716 aa20.93■□□□□ 0.94
SRSF1-208ENST00000584773 MYL3P08590 195 aa20.92■□□□□ 0.94
SRSF1-208ENST00000584773 MCM5P33992 734 aa20.92■□□□□ 0.94
SRSF1-208ENST00000584773 HSD17B4P51659 736 aa20.92■□□□□ 0.94
SRSF1-208ENST00000584773 ITGA7Q13683 1181 aa20.92■□□□□ 0.94
SRSF1-208ENST00000584773 SEPT14Q6ZU15 432 aa20.92■□□□□ 0.94
SRSF1-208ENST00000584773 SLC43A3Q8NBI5 491 aa20.92■□□□□ 0.94
SRSF1-208ENST00000584773 NSUN6Q8TEA1 469 aaKnown RBP20.92■□□□□ 0.94
SRSF1-208ENST00000584773 SCFD2Q8WU76 684 aa20.92■□□□□ 0.94
SRSF1-208ENST00000584773 MPHOSPH6Q99547 160 aaKnown RBP20.92■□□□□ 0.94
SRSF1-208ENST00000584773 PPP1R12CQ9BZL4 782 aa20.92■□□□□ 0.94
SRSF1-208ENST00000584773 PXMP2Q9NR77 195 aa20.92■□□□□ 0.94
SRSF1-208ENST00000584773 ZEB2O60315 1214 aa20.91■□□□□ 0.94
SRSF1-208ENST00000584773 CDC45O75419 566 aa20.91■□□□□ 0.94
SRSF1-208ENST00000584773 PLEKHA8P1O95397 391 aa20.91■□□□□ 0.94
SRSF1-208ENST00000584773 TXNP10599 105 aaKnown RBP20.91■□□□□ 0.94
SRSF1-208ENST00000584773 ARHGEF16Q5VV41 709 aa20.91■□□□□ 0.94
SRSF1-208ENST00000584773 NFXL1Q6ZNB6 911 aa20.91■□□□□ 0.94
SRSF1-208ENST00000584773 CMTR1Q8N1G2 835 aaKnown RBP20.91■□□□□ 0.94
SRSF1-208ENST00000584773 ZFP91Q96JP5 570 aaPredicted RBP20.91■□□□□ 0.94
SRSF1-208ENST00000584773 MROH7Q68CQ1 1323 aa20.91■□□□□ 0.94
SRSF1-208ENST00000584773 DDAH1O94760 285 aa20.9■□□□□ 0.94
SRSF1-208ENST00000584773 CD4P01730 458 aa20.9■□□□□ 0.94
SRSF1-208ENST00000584773 PURAQ00577 322 aaKnown RBP20.9■□□□□ 0.94
SRSF1-208ENST00000584773 LY6KQ17RY6 165 aa20.9■□□□□ 0.94
SRSF1-208ENST00000584773 IL31RAQ8NI17 732 aa20.9■□□□□ 0.94
SRSF1-208ENST00000584773 TCEANC2Q96MN5 208 aa20.9■□□□□ 0.94
SRSF1-208ENST00000584773 TRPV6Q9H1D0 765 aa20.9■□□□□ 0.94
SRSF1-208ENST00000584773 UMODL1Q5DID0 1318 aa20.9■□□□□ 0.94
SRSF1-208ENST00000584773 PNMA6FA0A0J9YX94 578 aa20.89■□□□□ 0.93
SRSF1-208ENST00000584773 CABYRO75952 493 aa20.89■□□□□ 0.93
SRSF1-208ENST00000584773 TIMP1P01033 207 aa20.89■□□□□ 0.93
SRSF1-208ENST00000584773 GHRHRQ02643 423 aa20.89■□□□□ 0.93
SRSF1-208ENST00000584773 FPGSQ05932 587 aa20.89■□□□□ 0.93
SRSF1-208ENST00000584773 TTLL4Q14679 1199 aa20.89■□□□□ 0.93
SRSF1-208ENST00000584773 CCDC62Q6P9F0 684 aa20.89■□□□□ 0.93
SRSF1-208ENST00000584773 RASEFQ8IZ41 740 aa20.89■□□□□ 0.93
SRSF1-208ENST00000584773 SCN10AQ9Y5Y9 1956 aa20.89■□□□□ 0.93
SRSF1-208ENST00000584773 CCDC69A6NI79 296 aa20.88■□□□□ 0.93
SRSF1-208ENST00000584773 B4DLN1 442 aa20.88■□□□□ 0.93
SRSF1-208ENST00000584773 TLR3O15455 904 aaKnown RBP20.88■□□□□ 0.93
SRSF1-208ENST00000584773 B4GALT4O60513 344 aa20.88■□□□□ 0.93
SRSF1-208ENST00000584773 NR3C2P08235 984 aa20.88■□□□□ 0.93
SRSF1-208ENST00000584773 MYCLP12524 364 aaPredicted RBP20.88■□□□□ 0.93
SRSF1-208ENST00000584773 CYP2C18P33260 490 aa20.88■□□□□ 0.93
SRSF1-208ENST00000584773 CPT1AP50416 773 aa20.88■□□□□ 0.93
SRSF1-208ENST00000584773 MRPL12P52815 198 aaKnown RBP20.88■□□□□ 0.93
SRSF1-208ENST00000584773 STXBP2Q15833 593 aa20.88■□□□□ 0.93
SRSF1-208ENST00000584773 ADCK5Q3MIX3 580 aa20.88■□□□□ 0.93
SRSF1-208ENST00000584773 FCHSD1Q86WN1 690 aa20.88■□□□□ 0.93
SRSF1-208ENST00000584773 SRBD1Q8N5C6 995 aaKnown RBP20.88■□□□□ 0.93
SRSF1-208ENST00000584773 DEFB123Q8N688 67 aa20.88■□□□□ 0.93
SRSF1-208ENST00000584773 CTCFLQ8NI51 663 aaPredicted RBP20.88■□□□□ 0.93
SRSF1-208ENST00000584773 TMEM87BQ96K49 555 aa20.88■□□□□ 0.93
SRSF1-208ENST00000584773 IWS1Q96ST2 819 aa20.88■□□□□ 0.93
SRSF1-208ENST00000584773 PDCD2LQ9BRP1 358 aa20.88■□□□□ 0.93
SRSF1-208ENST00000584773 MAF1Q9H063 256 aa20.88■□□□□ 0.93
SRSF1-208ENST00000584773 hCG_1642624A0A1W2PR95 340 aa20.87■□□□□ 0.93
SRSF1-208ENST00000584773 NKRFO15226 690 aaKnown RBP eCLIP20.87■□□□□ 0.93
SRSF1-208ENST00000584773 SORBS3O60504 671 aa20.87■□□□□ 0.93
SRSF1-208ENST00000584773 POLR3EQ9NVU0 708 aa20.87■□□□□ 0.93
SRSF1-208ENST00000584773 MYH7BA7E2Y1 1941 aa20.87■□□□□ 0.93
SRSF1-208ENST00000584773 A6NJR5 290 aa20.86■□□□□ 0.93
SRSF1-208ENST00000584773 RGS20O76081 388 aa20.86■□□□□ 0.93
SRSF1-208ENST00000584773 CSF2RAP15509 400 aa20.86■□□□□ 0.93
SRSF1-208ENST00000584773 ARHGAP1Q07960 439 aa20.86■□□□□ 0.93
SRSF1-208ENST00000584773 MFSD5Q6N075 450 aa20.86■□□□□ 0.93
SRSF1-208ENST00000584773 AFG1LQ8WV93 481 aa20.86■□□□□ 0.93
SRSF1-208ENST00000584773 MAP3K14Q99558 947 aa20.86■□□□□ 0.93
SRSF1-208ENST00000584773 MTG1Q9BT17 334 aaPredicted RBP20.86■□□□□ 0.93
SRSF1-208ENST00000584773 MTA3Q9BTC8 594 aa20.86■□□□□ 0.93
SRSF1-208ENST00000584773 SPZ1Q9BXG8 430 aa20.86■□□□□ 0.93
SRSF1-208ENST00000584773 TRMT13Q9NUP7 481 aaKnown RBP20.86■□□□□ 0.93
SRSF1-208ENST00000584773 GCOM1H8Y6P7 765 aaPredicted RBP20.85■□□□□ 0.93
SRSF1-208ENST00000584773 POLR2MP0CAP2 368 aa20.85■□□□□ 0.93
SRSF1-208ENST00000584773 ACRP10323 421 aa20.85■□□□□ 0.93
SRSF1-208ENST00000584773 KIF5BP33176 963 aa20.85■□□□□ 0.93
SRSF1-208ENST00000584773 LIFRP42702 1097 aa20.85■□□□□ 0.93
SRSF1-208ENST00000584773 CHMP4BP1P59074 171 aa20.85■□□□□ 0.93
SRSF1-208ENST00000584773 PGM5Q15124 567 aa20.85■□□□□ 0.93
SRSF1-208ENST00000584773 C16orf59Q7L2K0 433 aa20.85■□□□□ 0.93
SRSF1-208ENST00000584773 MICU3Q86XE3 530 aa20.85■□□□□ 0.93
SRSF1-208ENST00000584773 CCDC82Q8N4S0 544 aa20.85■□□□□ 0.93
SRSF1-208ENST00000584773 GPKOWQ92917 476 aaPredicted RBP eCLIP20.85■□□□□ 0.93
SRSF1-208ENST00000584773 RNPC3Q96LT9 517 aaKnown RBP20.85■□□□□ 0.93
SRSF1-208ENST00000584773 FAM161BQ96MY7 647 aa20.85■□□□□ 0.93
SRSF1-208ENST00000584773 NEK1Q96PY6 1258 aa20.85■□□□□ 0.93
SRSF1-208ENST00000584773 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.85■□□□□ 0.932e-21■■□□□ 11.4
SRSF1-208ENST00000584773 ALDH8A1Q9H2A2 487 aaPredicted RBP20.85■□□□□ 0.93
SRSF1-208ENST00000584773 EIF3JO75822 258 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms