RNA–Protein interactions for RNA: ENST00000584313.5

CLTC-213, Transcript of clathrin heavy chain, humanhuman

TSL 3

Gene CLTC, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-213ENST00000584313 GLT1D1Q96MS3 346 aa16.64■□□□□ 0.25
CLTC-213ENST00000584313 GDF15Q99988 308 aa16.64■□□□□ 0.25
CLTC-213ENST00000584313 STARD7Q9NQZ5 370 aa16.64■□□□□ 0.25
CLTC-213ENST00000584313 LCTP09848 1927 aa16.64■□□□□ 0.25
CLTC-213ENST00000584313 MCM3APO60318 1980 aa16.64■□□□□ 0.25
CLTC-213ENST00000584313 HOXA13P31271 388 aaPredicted RBP16.63■□□□□ 0.25
CLTC-213ENST00000584313 ARHGEF16Q5VV41 709 aa16.63■□□□□ 0.25
CLTC-213ENST00000584313 SYNE3Q6ZMZ3 975 aa16.63■□□□□ 0.25
CLTC-213ENST00000584313 MICU3Q86XE3 530 aa16.63■□□□□ 0.25
CLTC-213ENST00000584313 CMTR1Q8N1G2 835 aaKnown RBP16.63■□□□□ 0.25
CLTC-213ENST00000584313 SAMD3Q8N6K7 520 aa16.63■□□□□ 0.25
CLTC-213ENST00000584313 SCFD2Q8WU76 684 aa16.63■□□□□ 0.25
CLTC-213ENST00000584313 IWS1Q96ST2 819 aa16.63■□□□□ 0.25
CLTC-213ENST00000584313 MAP3K20Q9NYL2 800 aaKnown RBP16.63■□□□□ 0.25
CLTC-213ENST00000584313 PRKAG2Q9UGJ0 569 aa16.63■□□□□ 0.25
CLTC-213ENST00000584313 SNX14Q9Y5W7 946 aa16.63■□□□□ 0.25
CLTC-213ENST00000584313 ELP1O95163 1332 aa16.63■□□□□ 0.25
CLTC-213ENST00000584313 GCOM1H8Y6P7 765 aaPredicted RBP16.62■□□□□ 0.25
CLTC-213ENST00000584313 PQBP1O60828 265 aaKnown RBP16.62■□□□□ 0.25
CLTC-213ENST00000584313 POLR2MP0CAP2 368 aa16.62■□□□□ 0.25
CLTC-213ENST00000584313 EIF2AK2P19525 551 aaKnown RBP16.62■□□□□ 0.25
CLTC-213ENST00000584313 BMP8BP34820 402 aa16.62■□□□□ 0.25
CLTC-213ENST00000584313 PPP2R5BQ15173 497 aa16.62■□□□□ 0.25
CLTC-213ENST00000584313 STXBP2Q15833 593 aa16.62■□□□□ 0.25
CLTC-213ENST00000584313 APOA5Q6Q788 366 aa16.62■□□□□ 0.25
CLTC-213ENST00000584313 TMTC3Q6ZXV5 915 aa16.62■□□□□ 0.25
CLTC-213ENST00000584313 VTI1AQ96AJ9 217 aa16.62■□□□□ 0.25
CLTC-213ENST00000584313 JAKMIP1Q96N16 626 aaKnown RBP16.62■□□□□ 0.25
CLTC-213ENST00000584313 PRDM5Q9NQX1 630 aaPredicted RBP16.62■□□□□ 0.25
CLTC-213ENST00000584313 PXMP2Q9NR77 195 aa16.62■□□□□ 0.25
CLTC-213ENST00000584313 SEC63Q9UGP8 760 aaKnown RBP16.62■□□□□ 0.25
CLTC-213ENST00000584313 BRPF3Q9ULD4 1205 aa16.62■□□□□ 0.25
CLTC-213ENST00000584313 LAMA3Q16787 3333 aa16.62■□□□□ 0.25
CLTC-213ENST00000584313 LRRC37A2A6NM11 1700 aa16.62■□□□□ 0.25
CLTC-213ENST00000584313 ZEB2O60315 1214 aa16.61■□□□□ 0.25
CLTC-213ENST00000584313 CPA1P15085 419 aa16.61■□□□□ 0.25
CLTC-213ENST00000584313 MDM2Q00987 491 aaPredicted RBP16.61■□□□□ 0.25
CLTC-213ENST00000584313 CXCL17Q6UXB2 119 aa16.61■□□□□ 0.25
CLTC-213ENST00000584313 ANKRD33Q7Z3H0 272 aa16.61■□□□□ 0.25
CLTC-213ENST00000584313 TOX2Q96NM4 488 aa16.61■□□□□ 0.25
CLTC-213ENST00000584313 PDLIM7Q9NR12 457 aa16.61■□□□□ 0.25
CLTC-213ENST00000584313 A0A0U1RQG5 324 aaPredicted RBP16.6■□□□□ 0.25
CLTC-213ENST00000584313 A0A1W2PPC1 479 aa16.6■□□□□ 0.25
CLTC-213ENST00000584313 NKRFO15226 690 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLTC-213ENST00000584313 ZBTB43O43298 467 aa16.6■□□□□ 0.25
CLTC-213ENST00000584313 EPB41L2O43491 1005 aaKnown RBP16.6■□□□□ 0.25
CLTC-213ENST00000584313 EIF3JO75822 258 aaKnown RBP16.6■□□□□ 0.25
CLTC-213ENST00000584313 CABYRO75952 493 aa16.6■□□□□ 0.25
CLTC-213ENST00000584313 NR3C2P08235 984 aa16.6■□□□□ 0.25
CLTC-213ENST00000584313 TXNP10599 105 aaKnown RBP16.6■□□□□ 0.25
CLTC-213ENST00000584313 FGD1P98174 961 aa16.6■□□□□ 0.25
CLTC-213ENST00000584313 TTLL4Q14679 1199 aa16.6■□□□□ 0.25
CLTC-213ENST00000584313 SEPT14Q6ZU15 432 aa16.6■□□□□ 0.25
CLTC-213ENST00000584313 SH3RF1Q7Z6J0 888 aa16.6■□□□□ 0.25
CLTC-213ENST00000584313 FCHSD1Q86WN1 690 aa16.6■□□□□ 0.25
CLTC-213ENST00000584313 CCDC82Q8N4S0 544 aa16.6■□□□□ 0.25
CLTC-213ENST00000584313 OR6J1Q8NGC5 347 aa16.6■□□□□ 0.25
CLTC-213ENST00000584313 LBHD1Q9BQE6 289 aaPredicted RBP16.6■□□□□ 0.25
CLTC-213ENST00000584313 UBE2OQ9C0C9 1292 aaKnown RBP16.6■□□□□ 0.25
CLTC-213ENST00000584313 KLF18A0A0U1RQI7 1052 aa16.59■□□□□ 0.25
CLTC-213ENST00000584313 TRIM43BA6NCK2 446 aa16.59■□□□□ 0.25
CLTC-213ENST00000584313 DCDC2CA8MYV0 355 aa16.59■□□□□ 0.25
CLTC-213ENST00000584313 ARVCFO00192 962 aa16.59■□□□□ 0.25
CLTC-213ENST00000584313 ARIH2O95376 493 aa16.59■□□□□ 0.25
CLTC-213ENST00000584313 CLTBP09497 229 aa16.59■□□□□ 0.25
CLTC-213ENST00000584313 CPT1AP50416 773 aa16.59■□□□□ 0.25
CLTC-213ENST00000584313 CDK7P50613 346 aa16.59■□□□□ 0.25
CLTC-213ENST00000584313 FXR1P51114 621 aaKnown RBP eCLIP16.59■□□□□ 0.259e-7■■■□□ 18.1
CLTC-213ENST00000584313 RTN1Q16799 776 aa16.59■□□□□ 0.25
CLTC-213ENST00000584313 CCDC62Q6P9F0 684 aa16.59■□□□□ 0.25
CLTC-213ENST00000584313 BLOC1S2Q6QNY1 142 aa16.59■□□□□ 0.25
CLTC-213ENST00000584313 COPS5Q92905 334 aa16.59■□□□□ 0.25
CLTC-213ENST00000584313 TRIM43Q96BQ3 446 aaPredicted RBP16.59■□□□□ 0.25
CLTC-213ENST00000584313 PDCD2LQ9BRP1 358 aa16.59■□□□□ 0.25
CLTC-213ENST00000584313 RBM28Q9NW13 759 aaKnown RBP16.59■□□□□ 0.25
CLTC-213ENST00000584313 hCG_1642624A0A1W2PR95 340 aa16.58■□□□□ 0.24
CLTC-213ENST00000584313 MYCLP12524 364 aaPredicted RBP16.58■□□□□ 0.24
CLTC-213ENST00000584313 RPS6KB1P23443 525 aa16.58■□□□□ 0.24
CLTC-213ENST00000584313 PSMA5P28066 241 aa16.58■□□□□ 0.24
CLTC-213ENST00000584313 FAAP100Q0VG06 881 aa16.58■□□□□ 0.24
CLTC-213ENST00000584313 VSIG10LQ86VR7 867 aa16.58■□□□□ 0.24
CLTC-213ENST00000584313 IL31RAQ8NI17 732 aa16.58■□□□□ 0.24
CLTC-213ENST00000584313 USP26Q9BXU7 913 aa16.58■□□□□ 0.24
CLTC-213ENST00000584313 MROH7Q68CQ1 1323 aa16.58■□□□□ 0.24
CLTC-213ENST00000584313 LAMA2P24043 3122 aaKnown RBP16.58■□□□□ 0.24
CLTC-213ENST00000584313 BAZ2BQ9UIF8 2168 aaKnown RBP16.57■□□□□ 0.24
CLTC-213ENST00000584313 A6NJR5 290 aa16.57■□□□□ 0.24
CLTC-213ENST00000584313 GOLGA8AA7E2F4 631 aa16.57■□□□□ 0.24
CLTC-213ENST00000584313 GOLGA8BA8MQT2 603 aa16.57■□□□□ 0.24
CLTC-213ENST00000584313 KIAA0355O15063 1070 aa16.57■□□□□ 0.24
CLTC-213ENST00000584313 CASTP20810 708 aaKnown RBP16.57■□□□□ 0.24
CLTC-213ENST00000584313 RCAN1P53805 252 aa16.57■□□□□ 0.24
CLTC-213ENST00000584313 FUT2Q10981 343 aa16.57■□□□□ 0.24
CLTC-213ENST00000584313 PGM5Q15124 567 aa16.57■□□□□ 0.24
CLTC-213ENST00000584313 LY6KQ17RY6 165 aa16.57■□□□□ 0.24
CLTC-213ENST00000584313 BRDTQ58F21 947 aaPredicted RBP16.57■□□□□ 0.24
CLTC-213ENST00000584313 Q6ZUG5 572 aa16.57■□□□□ 0.24
CLTC-213ENST00000584313 FBXL16Q8N461 479 aa16.57■□□□□ 0.24
CLTC-213ENST00000584313 SLC43A3Q8NBI5 491 aa16.57■□□□□ 0.24
CLTC-213ENST00000584313 TMEM39AQ9NV64 488 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms