RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 TRIM47Q96LD4 638 aa15.75■□□□□ 0.11
VPS33B-208ENST00000574755 ARHGEF10LQ9HCE6 1279 aa15.75■□□□□ 0.11
VPS33B-208ENST00000574755 TAB2Q9NYJ8 693 aa15.75■□□□□ 0.11
VPS33B-208ENST00000574755 ZNRF3Q9ULT6 936 aa15.75■□□□□ 0.11
VPS33B-208ENST00000574755 KIF13BQ9NQT8 1826 aa15.74■□□□□ 0.11
VPS33B-208ENST00000574755 MEIS2O14770 477 aa15.74■□□□□ 0.11
VPS33B-208ENST00000574755 ECE1P42892 770 aa15.74■□□□□ 0.11
VPS33B-208ENST00000574755 COPB1P53618 953 aaKnown RBP15.74■□□□□ 0.11
VPS33B-208ENST00000574755 RBL2Q08999 1139 aa15.74■□□□□ 0.11
VPS33B-208ENST00000574755 AP3B2Q13367 1082 aa15.74■□□□□ 0.11
VPS33B-208ENST00000574755 MCM6Q14566 821 aa15.74■□□□□ 0.11
VPS33B-208ENST00000574755 FCHSD1Q86WN1 690 aa15.74■□□□□ 0.11
VPS33B-208ENST00000574755 CPLX3Q8WVH0 158 aa15.74■□□□□ 0.11
VPS33B-208ENST00000574755 NUDT12Q9BQG2 462 aa15.74■□□□□ 0.11
VPS33B-208ENST00000574755 VPS33BQ9H267 617 aa15.74■□□□□ 0.11
VPS33B-208ENST00000574755 CNTNAP1P78357 1384 aa15.74■□□□□ 0.11
VPS33B-208ENST00000574755 USP11P51784 963 aa15.73■□□□□ 0.11
VPS33B-208ENST00000574755 STK4Q13043 487 aa15.73■□□□□ 0.11
VPS33B-208ENST00000574755 CNNM4Q6P4Q7 775 aa15.73■□□□□ 0.11
VPS33B-208ENST00000574755 DHTKD1Q96HY7 919 aaPredicted RBP15.73■□□□□ 0.11
VPS33B-208ENST00000574755 SYNPO2Q9UMS6 1093 aa15.73■□□□□ 0.11
VPS33B-208ENST00000574755 ITIH6Q6UXX5 1313 aa15.73■□□□□ 0.11
VPS33B-208ENST00000574755 ZSCAN12O43309 604 aa15.73■□□□□ 0.11
VPS33B-208ENST00000574755 FCER1AP12319 257 aa15.73■□□□□ 0.11
VPS33B-208ENST00000574755 SRRTQ9BXP5 876 aaKnown RBP15.73■□□□□ 0.11
VPS33B-208ENST00000574755 GTPBP4Q9BZE4 634 aaKnown RBP15.73■□□□□ 0.11
VPS33B-208ENST00000574755 MYMKA6NI61 221 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 STAT2P52630 851 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 BTNL9Q6UXG8 535 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 DYMQ7RTS9 669 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 IRF2BP1Q8IU81 584 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 AGBL3Q8NEM8 1001 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 RAD54LQ92698 747 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 PANX2Q96RD6 677 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 UIMC1Q96RL1 719 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 TMEM39BQ9GZU3 492 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 THAP9Q9H5L6 903 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 PIM2Q9P1W9 311 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 BICDL2A1A5D9 508 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 SPDYE3A6NKU9 549 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 TPM1P09493 284 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 PPP1R2P41236 205 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 MCTP2Q6DN12 878 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 TTI2Q6NXR4 508 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 CSGALNACT2Q8N6G5 542 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 ACER1Q8TDN7 264 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 P2RX5Q93086 422 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 GOPCQ9HD26 462 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 MAGEC2Q9UBF1 373 aaPredicted RBP15.72■□□□□ 0.11
VPS33B-208ENST00000574755 ZBTB21Q9ULJ3 1066 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 PRR12Q9ULL5 1215 aa15.72■□□□□ 0.11
VPS33B-208ENST00000574755 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.72■□□□□ 0.11
VPS33B-208ENST00000574755 GYPCP04921 128 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 CCNE1P24864 410 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 EEF1GP26641 437 aaKnown RBP15.71■□□□□ 0.11
VPS33B-208ENST00000574755 CASP14P31944 242 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 ARHGAP4P98171 946 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 TMEM119Q4V9L6 283 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 SYT10Q6XYQ8 523 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 MIGA2Q7L4E1 593 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 KCNK18Q7Z418 384 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 CNGA4Q8IV77 575 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 CDAN1Q8IWY9 1227 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 HPS3Q969F9 1004 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 PPP2R2CQ9Y2T4 447 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 TMX2Q9Y320 296 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 PVALEFA0A1B0GWK0 134 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 CTIFO43310 598 aaKnown RBP15.71■□□□□ 0.11
VPS33B-208ENST00000574755 MFAP3LO75121 409 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 TAL1P17542 331 aaPredicted RBP15.71■□□□□ 0.11
VPS33B-208ENST00000574755 UBXN1Q04323 297 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 CXCL9Q07325 125 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 FKBP1CQ5VVH2 108 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 UNC13DQ70J99 1090 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 KIAA0895Q8NCT3 520 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 LRRC27Q9C0I9 530 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 SLC39A2Q9NP94 309 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 KCNMB3Q9NPA1 279 aa15.71■□□□□ 0.11
VPS33B-208ENST00000574755 KDM3AQ9Y4C1 1321 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 CYP3A7-CYP3A51PA0A087WV96 503 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 PES1O00541 588 aaKnown RBP15.7■□□□□ 0.1
VPS33B-208ENST00000574755 TUBB4AP04350 444 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 IDEP14735 1019 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 CYP3A7P24462 503 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 ECM1Q16610 540 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 MOXD1Q6UVY6 613 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 REXO1L1PQ8IX06 675 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 MTMR14Q8NCE2 650 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 NOC3LQ8WTT2 800 aaKnown RBP15.7■□□□□ 0.1
VPS33B-208ENST00000574755 P2RX7Q99572 595 aaKnown RBP15.7■□□□□ 0.1
VPS33B-208ENST00000574755 NT5C3AQ9H0P0 336 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 ZBTB7AO95365 584 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 FOSP01100 380 aaPredicted RBP15.7■□□□□ 0.1
VPS33B-208ENST00000574755 FXR1P51114 621 aaKnown RBP eCLIP15.7■□□□□ 0.1
VPS33B-208ENST00000574755 PRR16Q569H4 304 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 KIAA1755Q5JYT7 1200 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 FAM83BQ5T0W9 1011 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 ANKRD40Q6AI12 368 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 TOGARAM2Q6ZUX3 1019 aa15.7■□□□□ 0.1
VPS33B-208ENST00000574755 FAM83AQ86UY5 434 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms