RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 STAG1Q8WVM7 1258 aa13.5□□□□□ -0.25
PCDHGA9-201ENST00000573521 AS3MTQ9HBK9 375 aa13.5□□□□□ -0.25
PCDHGA9-201ENST00000573521 NRBP1Q9UHY1 535 aa13.5□□□□□ -0.25
PCDHGA9-201ENST00000573521 UAP1Q16222 522 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA9-201ENST00000573521 TCP11X2Q5H9J9 407 aa13.5□□□□□ -0.25
PCDHGA9-201ENST00000573521 ZBTB8OSQ8IWT0 167 aa13.5□□□□□ -0.25
PCDHGA9-201ENST00000573521 FMR1NBQ8N0W7 255 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA9-201ENST00000573521 NSMCE1Q8WV22 266 aa13.5□□□□□ -0.25
PCDHGA9-201ENST00000573521 CLIC6Q96NY7 704 aa13.5□□□□□ -0.25
PCDHGA9-201ENST00000573521 NT5C1BQ96P26 610 aa13.5□□□□□ -0.25
PCDHGA9-201ENST00000573521 LGALS16A8MUM7 142 aa13.5□□□□□ -0.25
PCDHGA9-201ENST00000573521 TECP42680 631 aa13.5□□□□□ -0.25
PCDHGA9-201ENST00000573521 SURF1Q15526 300 aa13.5□□□□□ -0.25
PCDHGA9-201ENST00000573521 SLC4A8Q2Y0W8 1093 aa13.5□□□□□ -0.25
PCDHGA9-201ENST00000573521 BTG4Q9NY30 223 aa13.5□□□□□ -0.25
PCDHGA9-201ENST00000573521 SAP30BPQ9UHR5 308 aaKnown RBP13.5□□□□□ -0.25
PCDHGA9-201ENST00000573521 HEG1Q9ULI3 1381 aa13.5□□□□□ -0.25
PCDHGA9-201ENST00000573521 MYO1FO00160 1098 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 CCT5P48643 541 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 HAUS8Q9BT25 410 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 ZNF277Q9NRM2 450 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 CCNL1Q9UK58 526 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 NSFP46459 744 aaKnown RBP13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 GUCY2FP51841 1108 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 KRT39Q6A163 491 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 NBPF10Q6P3W6 841 aaKnown RBP13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 MMS22LQ6ZRQ5 1243 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 KCTD17Q8N5Z5 321 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 MB21D1Q8N884 522 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 TGFBRAP1Q8WUH2 860 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 HVCN1Q96D96 273 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 CDHR1Q96JP9 859 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 RIPOR2Q9Y4F9 1068 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 CDHR2Q9BYE9 1310 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 DEUP1Q05D60 604 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 FBXO38Q6PIJ6 1188 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 DPP8Q6V1X1 898 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 EDC3Q96F86 508 aaKnown RBP13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 PAGE5Q96GU1 130 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 NACC1Q96RE7 527 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 PLEKHG2Q9H7P9 1386 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 PFDN6O15212 129 aa13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 HSPA8P11142 646 aaKnown RBP13.49□□□□□ -0.25
PCDHGA9-201ENST00000573521 ECEL1O95672 775 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 ATF7P17544 494 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 AP3B2Q13367 1082 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 NNTQ13423 1086 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 LONRF3Q496Y0 759 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 RINT1Q6NUQ1 792 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 ZNF589Q86UQ0 364 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 ACSBG1Q96GR2 724 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 NHEJ1Q9H9Q4 299 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 CHUKO15111 745 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 RNF8O76064 485 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 NR1D1P20393 614 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 CC2D1AQ6P1N0 951 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 MAGOHBQ96A72 148 aaKnown RBP13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 DHX36Q9H2U1 1008 aaKnown RBP13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 XDHP47989 1333 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 KPNA2P52292 529 aaKnown RBP13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 RBBP5Q15291 538 aaKnown RBP13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 DEPTORQ8TB45 409 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 ACCSQ96QU6 501 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 NDST4Q9H3R1 872 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 BIN2Q9UBW5 565 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 MADDQ8WXG6 1647 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 GFPT2O94808 682 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 TNNC2P02585 160 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 MYL7Q01449 175 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 EHHADHQ08426 723 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 ARHGAP27Q6ZUM4 889 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 UNC13DQ70J99 1090 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 SGMS1Q86VZ5 419 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 CEP120Q8N960 986 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 DISC1Q9NRI5 854 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 PSD3Q9NYI0 1048 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 CEP72Q9P209 647 aa13.48□□□□□ -0.25
PCDHGA9-201ENST00000573521 DAPK3O43293 454 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 CRCPO75575 148 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 SASH1O94885 1247 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 NR2F2P24468 414 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 RNASE9P60153 205 aaKnown RBP13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 CHRNDQ07001 517 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 LRRC24Q50LG9 513 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 MAPKAPK5Q8IW41 473 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 FAM212AQ96EL1 285 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 PCDHA13Q9Y5I0 950 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 TACC3Q9Y6A5 838 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 ITIH6Q6UXX5 1313 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 SYNGAP1Q96PV0 1343 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 GGPS1O95749 300 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 LIG3P49916 1009 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 SLC12A2P55011 1212 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 BFSP1Q12934 665 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 RPUSD2Q8IZ73 545 aaKnown RBP13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 MICAL1Q8TDZ2 1067 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 EPB41L5Q9HCM4 733 aa13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 SPATS2LQ9NUQ6 558 aaKnown RBP13.47□□□□□ -0.25
PCDHGA9-201ENST00000573521 NOC2LQ9Y3T9 749 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms