RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CARD10Q9BWT7 1032 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 DHX36Q9H2U1 1008 aaKnown RBP5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 BRD9Q9H8M2 597 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 LIN7BQ9HAP6 207 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 CYP4F11Q9HBI6 524 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 IFT80Q9P2H3 777 aaPredicted RBP5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 CFDP1Q9UEE9 299 aaPredicted RBP5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 ZNF112Q9UJU3 913 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 SAMM50Q9Y512 469 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 PCDHB5Q9Y5E4 795 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 PCDHB3Q9Y5E6 796 aa5.78□□□□□ -1.48
TOPBP1-210ENST00000572787 LTBP3Q9NS15 1303 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 B4DLN1 442 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 F5H0A9 414 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 CCDC159P0C7I6 412 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 DHRS4L1P0CG22 281 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 PABPC1P11940 636 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 MUTP22033 750 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 GRIK1P39086 918 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 MAN2A2P49641 1150 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 TPD52P55327 224 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 TMF1P82094 1093 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 SLC7A5Q01650 507 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 ZNF252P-AS1Q0IIN9 211 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 KIAA2012Q0VF49 1180 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 PKN2Q16513 984 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 SLC27A3Q5K4L6 730 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 FKBP15Q5T1M5 1219 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 CCDC30Q5VVM6 783 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 INTS3Q68E01 1043 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 DARS2Q6PI48 645 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 NSMFQ6X4W1 530 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 UNC5AQ6ZN44 842 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 ENOSF1Q7L5Y1 443 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 RASGRP2Q7LDG7 609 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 FGD2Q7Z6J4 655 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 NRSN1Q8IZ57 195 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 TMEM102Q8N9M5 508 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 TMEM40Q8WWA1 233 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 SNX21Q969T3 373 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 WNK4Q96J92 1243 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 ASB2Q96Q27 587 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 MPHOSPH8Q99549 860 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 BAG1Q99933 345 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 ADPGKQ9BRR6 497 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 CCDC68Q9H2F9 335 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 SLC52A2Q9HAB3 445 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 UBN1Q9NPG3 1134 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 WASH6PQ9NQA3 447 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 ABI2Q9NYB9 513 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 GPR34Q9UPC5 381 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 SMC3Q9UQE7 1217 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 RTCBQ9Y3I0 505 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 KCNMB2Q9Y691 235 aa5.77□□□□□ -1.49
TOPBP1-210ENST00000572787 A0A087WV62 115 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 FSD2A1L4K1 749 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 EIF3FO00303 357 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 FOXN3O00409 490 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 ZBED4O75132 1171 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 SLITRK5O94991 958 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 FKBP9O95302 570 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 MTHFD1P11586 935 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 MYCLP12524 364 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 DESP17661 470 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 ADCYAP1R1P41586 468 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 PMS1P54277 932 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 ARL4CP56559 192 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 DHX9Q08211 1270 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 E2F5Q15329 346 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 KIAA0753Q2KHM9 967 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 LINC01559Q495D7 138 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 NUGGCQ68CJ6 796 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 NFXL1Q6ZNB6 911 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 RFX8Q6ZV50 586 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 FKBP9P1Q75LS8 142 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 PTRH1Q86Y79 214 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 CCAR2Q8N163 923 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 MPNDQ8N594 471 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 TRAPPC12Q8WVT3 735 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 ARL8AQ96BM9 186 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 MAGEB10Q96LZ2 347 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 NT5C1BQ96P26 610 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 SPSB2Q99619 263 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 TRIT1Q9H3H1 467 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 DEF6Q9H4E7 631 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 ANTXR1Q9H6X2 564 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 ZWILCHQ9H900 591 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 ZNF277Q9NRM2 450 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 ABCF3Q9NUQ8 709 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 RTEL1Q9NZ71 1219 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 GPRC5BQ9NZH0 403 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 TBK1Q9UHD2 729 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 SLC13A4Q9UKG4 626 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 PCDHGB6Q9Y5F9 930 aa5.76□□□□□ -1.49
TOPBP1-210ENST00000572787 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 KLHL33A6NCF5 533 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 FAM227AF5H4B4 570 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 H0Y3Z8 333 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 INO80B-WBP1J3KQ70 363 aa5.75□□□□□ -1.49
TOPBP1-210ENST00000572787 IPO5O00410 1097 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms