RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 SEMA6BQ9H3T3 888 aa20.18■□□□□ 0.82
LITAF-211ENST00000572255 HIPK3Q9H422 1215 aa20.18■□□□□ 0.82
LITAF-211ENST00000572255 KIAA1217Q5T5P2 1943 aa20.17■□□□□ 0.82
LITAF-211ENST00000572255 PALM3A6NDB9 673 aaPredicted RBP20.17■□□□□ 0.82
LITAF-211ENST00000572255 ARIH2O95376 493 aa20.17■□□□□ 0.82
LITAF-211ENST00000572255 TTLL4Q14679 1199 aa20.17■□□□□ 0.82
LITAF-211ENST00000572255 BRDTQ58F21 947 aaPredicted RBP20.17■□□□□ 0.82
LITAF-211ENST00000572255 NCOA7Q8NI08 942 aa20.17■□□□□ 0.82
LITAF-211ENST00000572255 MTMR8Q96EF0 704 aa20.17■□□□□ 0.82
LITAF-211ENST00000572255 RMDN3Q96TC7 470 aa20.17■□□□□ 0.82
LITAF-211ENST00000572255 MTG1Q9BT17 334 aaPredicted RBP20.17■□□□□ 0.82
LITAF-211ENST00000572255 NOC4LQ9BVI4 516 aaKnown RBP20.17■□□□□ 0.82
LITAF-211ENST00000572255 ALDH8A1Q9H2A2 487 aaPredicted RBP20.17■□□□□ 0.82
LITAF-211ENST00000572255 GPHNQ9NQX3 736 aaPredicted RBP20.17■□□□□ 0.82
LITAF-211ENST00000572255 UMODL1Q5DID0 1318 aa20.17■□□□□ 0.82
LITAF-211ENST00000572255 SCN10AQ9Y5Y9 1956 aa20.17■□□□□ 0.82
LITAF-211ENST00000572255 ERICH2A1L162 156 aa20.16■□□□□ 0.82
LITAF-211ENST00000572255 A6NJR5 290 aa20.16■□□□□ 0.82
LITAF-211ENST00000572255 PPP1R11O60927 126 aaPredicted RBP20.16■□□□□ 0.82
LITAF-211ENST00000572255 ACRP10323 421 aa20.16■□□□□ 0.82
LITAF-211ENST00000572255 GRM4Q14833 912 aa20.16■□□□□ 0.82
LITAF-211ENST00000572255 CCDC62Q6P9F0 684 aa20.16■□□□□ 0.82
LITAF-211ENST00000572255 PSRC1Q6PGN9 363 aaPredicted RBP20.16■□□□□ 0.82
LITAF-211ENST00000572255 STOX1Q6ZVD7 989 aa20.16■□□□□ 0.82
LITAF-211ENST00000572255 MAP4K1Q92918 833 aa20.16■□□□□ 0.82
LITAF-211ENST00000572255 IWS1Q96ST2 819 aa20.16■□□□□ 0.82
LITAF-211ENST00000572255 TTYH1Q9H313 450 aaPredicted RBP20.16■□□□□ 0.82
LITAF-211ENST00000572255 SENP2Q9HC62 589 aa20.16■□□□□ 0.82
LITAF-211ENST00000572255 IL23AQ9NPF7 189 aa20.16■□□□□ 0.82
LITAF-211ENST00000572255 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.15■□□□□ 0.82
LITAF-211ENST00000572255 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.15■□□□□ 0.82
LITAF-211ENST00000572255 OPLAHO14841 1288 aa20.15■□□□□ 0.82
LITAF-211ENST00000572255 ZBTB5O15062 677 aa20.15■□□□□ 0.82
LITAF-211ENST00000572255 KPNA6O60684 536 aa20.15■□□□□ 0.82
LITAF-211ENST00000572255 CFBP00751 764 aa20.15■□□□□ 0.82
LITAF-211ENST00000572255 WTAPQ15007 396 aa20.15■□□□□ 0.82
LITAF-211ENST00000572255 SART3Q15020 963 aaKnown RBP20.15■□□□□ 0.82
LITAF-211ENST00000572255 STXBP2Q15833 593 aa20.15■□□□□ 0.82
LITAF-211ENST00000572255 SLC35G1Q2M3R5 365 aa20.15■□□□□ 0.82
LITAF-211ENST00000572255 ARHGEF16Q5VV41 709 aa20.15■□□□□ 0.82
LITAF-211ENST00000572255 SEPT14Q6ZU15 432 aa20.15■□□□□ 0.82
LITAF-211ENST00000572255 ZNF365Q70YC5 407 aa20.15■□□□□ 0.82
LITAF-211ENST00000572255 CHST3Q7LGC8 479 aa20.15■□□□□ 0.82
LITAF-211ENST00000572255 CDX2Q99626 313 aaPredicted RBP20.15■□□□□ 0.82
LITAF-211ENST00000572255 RBM8AQ9Y5S9 174 aaKnown RBP20.15■□□□□ 0.82
LITAF-211ENST00000572255 BAZ2BQ9UIF8 2168 aaKnown RBP20.15■□□□□ 0.82
LITAF-211ENST00000572255 TMEM265A0A087WTH1 108 aa20.14■□□□□ 0.81
LITAF-211ENST00000572255 EIF2AK2P19525 551 aaKnown RBP20.14■□□□□ 0.81
LITAF-211ENST00000572255 HSD17B4P51659 736 aa20.14■□□□□ 0.81
LITAF-211ENST00000572255 CCL23P55773 120 aa20.14■□□□□ 0.81
LITAF-211ENST00000572255 GHRHRQ02643 423 aa20.14■□□□□ 0.81
LITAF-211ENST00000572255 RASIP1Q5U651 963 aa20.14■□□□□ 0.81
LITAF-211ENST00000572255 WNT8AQ9H1J5 351 aa20.14■□□□□ 0.81
LITAF-211ENST00000572255 TRMT13Q9NUP7 481 aaKnown RBP20.14■□□□□ 0.81
LITAF-211ENST00000572255 PCDHA1Q9Y5I3 950 aa20.14■□□□□ 0.81
LITAF-211ENST00000572255 DNAJB2P25686 324 aa20.13■□□□□ 0.81
LITAF-211ENST00000572255 ANTXR2P58335 489 aa20.13■□□□□ 0.81
LITAF-211ENST00000572255 TROAPQ12815 778 aa20.13■□□□□ 0.81
LITAF-211ENST00000572255 LY6KQ17RY6 165 aa20.13■□□□□ 0.81
LITAF-211ENST00000572255 NBPF20Q3BBV1 942 aa20.13■□□□□ 0.81
LITAF-211ENST00000572255 FAM47CQ5HY64 1035 aa20.13■□□□□ 0.81
LITAF-211ENST00000572255 TMEM67Q5HYA8 995 aa20.13■□□□□ 0.81
LITAF-211ENST00000572255 HOMER1Q86YM7 354 aa20.13■□□□□ 0.81
LITAF-211ENST00000572255 MB21D2Q8IYB1 491 aaPredicted RBP20.13■□□□□ 0.81
LITAF-211ENST00000572255 PIGSQ96S52 555 aa20.13■□□□□ 0.81
LITAF-211ENST00000572255 RIOX1Q9H6W3 641 aa20.13■□□□□ 0.81
LITAF-211ENST00000572255 PXMP2Q9NR77 195 aa20.13■□□□□ 0.81
LITAF-211ENST00000572255 GH1P01241 217 aa20.12■□□□□ 0.81
LITAF-211ENST00000572255 NR3C2P08235 984 aa20.12■□□□□ 0.81
LITAF-211ENST00000572255 SUPT20HL2P0C7V6 817 aa20.12■□□□□ 0.81
LITAF-211ENST00000572255 CYP2C9P11712 490 aa20.12■□□□□ 0.81
LITAF-211ENST00000572255 ARHGAP1Q07960 439 aa20.12■□□□□ 0.81
LITAF-211ENST00000572255 IGDCC4Q8TDY8 1250 aa20.12■□□□□ 0.81
LITAF-211ENST00000572255 PPP1R13LQ8WUF5 828 aa20.12■□□□□ 0.81
LITAF-211ENST00000572255 AFG1LQ8WV93 481 aa20.12■□□□□ 0.81
LITAF-211ENST00000572255 CHD9Q3L8U1 2897 aa20.11■□□□□ 0.81
LITAF-211ENST00000572255 CYTH3O43739 400 aa20.11■□□□□ 0.81
LITAF-211ENST00000572255 EIF3JO75822 258 aaKnown RBP20.11■□□□□ 0.81
LITAF-211ENST00000572255 FGBP02675 491 aa20.11■□□□□ 0.81
LITAF-211ENST00000572255 TRAF1Q13077 416 aa20.11■□□□□ 0.81
LITAF-211ENST00000572255 NFRKBQ6P4R8 1299 aa20.11■□□□□ 0.81
LITAF-211ENST00000572255 CATIPQ7Z7H3 387 aa20.11■□□□□ 0.81
LITAF-211ENST00000572255 MYLIPQ8WY64 445 aa20.11■□□□□ 0.81
LITAF-211ENST00000572255 HERVK_113Q902F9 699 aa20.11■□□□□ 0.81
LITAF-211ENST00000572255 MAP3K20Q9NYL2 800 aaKnown RBP20.11■□□□□ 0.81
LITAF-211ENST00000572255 GRXCR1A8MXD5 290 aa20.1■□□□□ 0.81
LITAF-211ENST00000572255 MMP3P08254 477 aa20.1■□□□□ 0.81
LITAF-211ENST00000572255 HOXA13P31271 388 aaPredicted RBP20.1■□□□□ 0.81
LITAF-211ENST00000572255 SAMD3Q8N6K7 520 aa20.1■□□□□ 0.81
LITAF-211ENST00000572255 SCLYQ96I15 445 aa20.1■□□□□ 0.81
LITAF-211ENST00000572255 PDCD2LQ9BRP1 358 aa20.1■□□□□ 0.81
LITAF-211ENST00000572255 LSG1Q9H089 658 aaKnown RBP20.1■□□□□ 0.81
LITAF-211ENST00000572255 MTIF3Q9H2K0 278 aaKnown RBP20.1■□□□□ 0.81
LITAF-211ENST00000572255 CXXC1Q9P0U4 656 aaPredicted RBP20.1■□□□□ 0.81
LITAF-211ENST00000572255 DDX41Q9UJV9 622 aaKnown RBP20.1■□□□□ 0.81
LITAF-211ENST00000572255 UNC80Q8N2C7 3258 aa20.1■□□□□ 0.81
LITAF-211ENST00000572255 EYSQ5T1H1 3165 aa20.09■□□□□ 0.81
LITAF-211ENST00000572255 PNMA6FA0A0J9YX94 578 aa20.09■□□□□ 0.81
LITAF-211ENST00000572255 PTPN11Q06124 597 aaPredicted RBP20.09■□□□□ 0.81
LITAF-211ENST00000572255 OTOP2Q7RTS6 562 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms