RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 SNX17Q15036 470 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 PWP2Q15269 919 aaKnown RBP11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 GNASQ5JWF2 1037 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 ARHGEF16Q5VV41 709 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 SH3RF1Q7Z6J0 888 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 TLK2Q86UE8 772 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 FCHSD1Q86WN1 690 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 IL31RAQ8NI17 732 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 NSUN6Q8TEA1 469 aaKnown RBP11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 BRF1Q92994 677 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 RRP36Q96EU6 259 aaKnown RBP11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 LZTS2Q9BRK4 669 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 LARP6Q9BRS8 491 aaKnown RBP11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 TSEN34Q9BSV6 310 aaKnown RBP11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 PRO3102Q9H379 93 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 PXMP2Q9NR77 195 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 RBM27Q9P2N5 1060 aaKnown RBP11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 ATP11BQ9Y2G3 1177 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 MYH7BA7E2Y1 1941 aa11.85□□□□□ -0.51
GTF3C1-213ENST00000571886 GCOM1H8Y6P7 765 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 ZBTB43O43298 467 aa11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 NR3C2P08235 984 aa11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 HMGB1P09429 215 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 POLR2MP0CAP2 368 aa11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 ADD1P35611 737 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 RTN1Q16799 776 aa11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 DUSP28Q4G0W2 176 aa11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 CCDC62Q6P9F0 684 aa11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 USP17L6PQ6QN14 398 aa11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 SYNE3Q6ZMZ3 975 aa11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 SEPT14Q6ZU15 432 aa11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 PDCD2LQ9BRP1 358 aa11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 AGXT2Q9BYV1 514 aa11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 MAF1Q9H063 256 aa11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 ZSWIM6Q9HCJ5 1215 aa11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 Q9Y3F1 56 aa11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 CEP290O15078 2479 aa11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 DNAH12Q6ZR08 3092 aa11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 CNTNAP5Q8WYK1 1306 aa11.84□□□□□ -0.51
GTF3C1-213ENST00000571886 MOXD2PA6NHM9 499 aa11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 GOLGA8AA7E2F4 631 aa11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 GOLGA8BA8MQT2 603 aa11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 MEIS2O14770 477 aa11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 EPB41L2O43491 1005 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 RGS20O76081 388 aa11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 MYCLP12524 364 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 TLE2Q04725 743 aa11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 TOB2Q14106 344 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 PGM5Q15124 567 aa11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 FSCN1Q16658 493 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 LY6KQ17RY6 165 aa11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 HABP4Q5JVS0 413 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 TYW1BQ6NUM6 668 aa11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 CXCL17Q6UXB2 119 aa11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 RUFY3Q7L099 469 aa11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 PPP1R13LQ8WUF5 828 aa11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 GPKOWQ92917 476 aaPredicted RBP eCLIP11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 IWS1Q96ST2 819 aa11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 GDF15Q99988 308 aa11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 AP5M1Q9H0R1 490 aa11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 STARD7Q9NQZ5 370 aa11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 NAP1L2Q9ULW6 460 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 V9GY48 417 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 GRIN2DO15399 1336 aa11.83□□□□□ -0.52
GTF3C1-213ENST00000571886 TRIM43BA6NCK2 446 aa11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 ADAMTS3O15072 1205 aa11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 PPFIA3O75145 1194 aa11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 TXNP10599 105 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 ITGB8P26012 769 aa11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 MAGEA10P43363 369 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 CDK7P50613 346 aa11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 MDM2Q00987 491 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 STXBP2Q15833 593 aa11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 C1orf53Q5VUE5 145 aa11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 WWC2Q6AWC2 1192 aa11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 VSIG10LQ86VR7 867 aa11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 FBXL16Q8N461 479 aa11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 SAMD3Q8N6K7 520 aa11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 PCSK9Q8NBP7 692 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 OR6J1Q8NGC5 347 aa11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 VTI1AQ96AJ9 217 aa11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 TRIM43Q96BQ3 446 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 UPF3BQ9BZI7 483 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 BCAS3Q9H6U6 928 aa11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 SPC25Q9HBM1 224 aa11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 RBM28Q9NW13 759 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 MAP3K20Q9NYL2 800 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-213ENST00000571886 DOCK5Q9H7D0 1870 aa11.81□□□□□ -0.52
GTF3C1-213ENST00000571886 SORBS3O60504 671 aa11.81□□□□□ -0.52
GTF3C1-213ENST00000571886 PQBP1O60828 265 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-213ENST00000571886 EIF3JO75822 258 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-213ENST00000571886 PSMA5P28066 241 aa11.81□□□□□ -0.52
GTF3C1-213ENST00000571886 PSMC6P62333 389 aa11.81□□□□□ -0.52
GTF3C1-213ENST00000571886 MRPS9P82933 396 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-213ENST00000571886 FGD1P98174 961 aa11.81□□□□□ -0.52
GTF3C1-213ENST00000571886 PPP2R5BQ15173 497 aa11.81□□□□□ -0.52
GTF3C1-213ENST00000571886 UBE2SQ16763 222 aa11.81□□□□□ -0.52
GTF3C1-213ENST00000571886 SCFD2Q8WU76 684 aa11.81□□□□□ -0.52
GTF3C1-213ENST00000571886 GLT1D1Q96MS3 346 aa11.81□□□□□ -0.52
GTF3C1-213ENST00000571886 MPHOSPH6Q99547 160 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms