RNA–Protein interactions for RNA: ENST00000570199.1

EPB42-209, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 3

Gene EPB42, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-209ENST00000570199 NR1I3Q14994 352 aa4.33□□□□□ -1.72
EPB42-209ENST00000570199 TARBP2Q15633 366 aaKnown RBP4.33□□□□□ -1.72
EPB42-209ENST00000570199 CWF19L1Q69YN2 538 aaKnown RBP4.33□□□□□ -1.72
EPB42-209ENST00000570199 OR6P1Q8NGX9 317 aa4.33□□□□□ -1.72
EPB42-209ENST00000570199 DVL3Q92997 716 aaPredicted RBP4.33□□□□□ -1.72
EPB42-209ENST00000570199 ANAPC16Q96DE5 110 aa4.33□□□□□ -1.72
EPB42-209ENST00000570199 FGD4Q96M96 766 aa4.33□□□□□ -1.72
EPB42-209ENST00000570199 MCMBPQ9BTE3 642 aa4.33□□□□□ -1.72
EPB42-209ENST00000570199 ZNF747Q9BV97 191 aa4.33□□□□□ -1.72
EPB42-209ENST00000570199 PHAXQ9H814 394 aaKnown RBP4.33□□□□□ -1.72
EPB42-209ENST00000570199 ST6GALNAC2Q9UJ37 374 aa4.33□□□□□ -1.72
EPB42-209ENST00000570199 CD3EP07766 207 aa4.32□□□□□ -1.72
EPB42-209ENST00000570199 ATF4P18848 351 aaPredicted RBP4.32□□□□□ -1.72
EPB42-209ENST00000570199 SLC7A5Q01650 507 aa4.32□□□□□ -1.72
EPB42-209ENST00000570199 KLF10Q13118 480 aa4.32□□□□□ -1.72
EPB42-209ENST00000570199 TCEAL1Q15170 157 aa4.32□□□□□ -1.72
EPB42-209ENST00000570199 HEATR6Q6AI08 1181 aaKnown RBP4.32□□□□□ -1.72
EPB42-209ENST00000570199 NAT16Q8N8M0 369 aa4.32□□□□□ -1.72
EPB42-209ENST00000570199 C8orf37Q96NL8 207 aa4.32□□□□□ -1.72
EPB42-209ENST00000570199 SPATA6Q9NWH7 488 aaPredicted RBP4.32□□□□□ -1.72
EPB42-209ENST00000570199 ING1Q9UK53 422 aaPredicted RBP4.32□□□□□ -1.72
EPB42-209ENST00000570199 SLC12A7Q9Y666 1083 aa4.32□□□□□ -1.72
EPB42-209ENST00000570199 MRVI1Q9Y6F6 885 aa4.32□□□□□ -1.72
EPB42-209ENST00000570199 FGF10O15520 208 aaPredicted RBP4.31□□□□□ -1.72
EPB42-209ENST00000570199 SRGAP3O43295 1099 aa4.31□□□□□ -1.72
EPB42-209ENST00000570199 VAMP4O75379 141 aa4.31□□□□□ -1.72
EPB42-209ENST00000570199 ENDOUP21128 410 aaKnown RBP4.31□□□□□ -1.72
EPB42-209ENST00000570199 CASP7P55210 303 aa4.31□□□□□ -1.72
EPB42-209ENST00000570199 GNL2Q13823 731 aaKnown RBP4.31□□□□□ -1.72
EPB42-209ENST00000570199 KIAA1211LQ6NV74 962 aa4.31□□□□□ -1.72
EPB42-209ENST00000570199 ADAT2Q7Z6V5 191 aaKnown RBP4.31□□□□□ -1.72
EPB42-209ENST00000570199 NOX5Q96PH1 765 aa4.31□□□□□ -1.72
EPB42-209ENST00000570199 WHRNQ9P202 907 aa4.31□□□□□ -1.72
EPB42-209ENST00000570199 APEX2Q9UBZ4 518 aa4.31□□□□□ -1.72
EPB42-209ENST00000570199 SF3B6Q9Y3B4 125 aaKnown RBP4.31□□□□□ -1.72
EPB42-209ENST00000570199 A0A087WZG4 1122 aa4.3□□□□□ -1.72
EPB42-209ENST00000570199 FZD7O75084 574 aa4.3□□□□□ -1.72
EPB42-209ENST00000570199 CYBBP04839 570 aa4.3□□□□□ -1.72
EPB42-209ENST00000570199 ASGR2P07307 311 aa4.3□□□□□ -1.72
EPB42-209ENST00000570199 POU4F1Q01851 419 aa4.3□□□□□ -1.72
EPB42-209ENST00000570199 DPY19L1Q2PZI1 675 aa4.3□□□□□ -1.72
EPB42-209ENST00000570199 VHLLQ6RSH7 139 aa4.3□□□□□ -1.72
EPB42-209ENST00000570199 ZNF513Q8N8E2 541 aaPredicted RBP4.3□□□□□ -1.72
EPB42-209ENST00000570199 PTCHD1Q96NR3 888 aa4.3□□□□□ -1.72
EPB42-209ENST00000570199 RNF38Q9H0F5 515 aa4.3□□□□□ -1.72
EPB42-209ENST00000570199 GBP3Q9H0R5 595 aa4.3□□□□□ -1.72
EPB42-209ENST00000570199 CGGBP1Q9UFW8 167 aaPredicted RBP4.3□□□□□ -1.72
EPB42-209ENST00000570199 STRIP2Q9ULQ0 834 aa4.3□□□□□ -1.72
EPB42-209ENST00000570199 DIS3Q9Y2L1 958 aaKnown RBP4.3□□□□□ -1.72
EPB42-209ENST00000570199 FAN1Q9Y2M0 1017 aa4.3□□□□□ -1.72
EPB42-209ENST00000570199 TSC22D4Q9Y3Q8 395 aa4.3□□□□□ -1.72
EPB42-209ENST00000570199 STXBP3O00186 592 aa4.29□□□□□ -1.72
EPB42-209ENST00000570199 SMAD7O15105 426 aaKnown RBP4.29□□□□□ -1.72
EPB42-209ENST00000570199 NOP2P46087 812 aaKnown RBP4.29□□□□□ -1.72
EPB42-209ENST00000570199 PRR5P85299 388 aa4.29□□□□□ -1.72
EPB42-209ENST00000570199 ARID5AQ03989 594 aa4.29□□□□□ -1.72
EPB42-209ENST00000570199 HLA-DQA1Q5Y7H0 255 aa4.29□□□□□ -1.72
EPB42-209ENST00000570199 PAQR3Q6TCH7 311 aa4.29□□□□□ -1.72
EPB42-209ENST00000570199 LIMS2Q7Z4I7 341 aa4.29□□□□□ -1.72
EPB42-209ENST00000570199 B3GNT8Q7Z7M8 397 aa4.29□□□□□ -1.72
EPB42-209ENST00000570199 ARHGEF39Q8N4T4 335 aa4.29□□□□□ -1.72
EPB42-209ENST00000570199 ADAMTS17Q8TE56 1095 aa4.29□□□□□ -1.72
EPB42-209ENST00000570199 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.29□□□□□ -1.72
EPB42-209ENST00000570199 LGR4Q9BXB1 951 aa4.29□□□□□ -1.72
EPB42-209ENST00000570199 TANGO6Q9C0B7 1094 aa4.29□□□□□ -1.72
EPB42-209ENST00000570199 VPS11Q9H270 941 aa4.29□□□□□ -1.72
EPB42-209ENST00000570199 ANKRD34BA5PLL1 514 aa4.28□□□□□ -1.72
EPB42-209ENST00000570199 B2RBV5 119 aa4.28□□□□□ -1.72
EPB42-209ENST00000570199 AURKAO14965 403 aa4.28□□□□□ -1.72
EPB42-209ENST00000570199 PPM1BO75688 479 aa4.28□□□□□ -1.72
EPB42-209ENST00000570199 FGRP09769 529 aa4.28□□□□□ -1.72
EPB42-209ENST00000570199 ETFBP38117 255 aa4.28□□□□□ -1.72
EPB42-209ENST00000570199 SARSP49591 514 aaKnown RBP4.28□□□□□ -1.72
EPB42-209ENST00000570199 RCSD1Q6JBY9 416 aa4.28□□□□□ -1.72
EPB42-209ENST00000570199 CYP2R1Q6VVX0 501 aa4.28□□□□□ -1.72
EPB42-209ENST00000570199 MCF2L2Q86YR7 1114 aa4.28□□□□□ -1.72
EPB42-209ENST00000570199 JAMLQ86YT9 394 aa4.28□□□□□ -1.72
EPB42-209ENST00000570199 CHST13Q8NET6 341 aa4.28□□□□□ -1.72
EPB42-209ENST00000570199 BCAS3Q9H6U6 928 aa4.28□□□□□ -1.72
EPB42-209ENST00000570199 PPP1R1BQ9UD71 204 aaPredicted RBP4.28□□□□□ -1.72
EPB42-209ENST00000570199 INVSQ9Y283 1065 aa4.28□□□□□ -1.72
EPB42-209ENST00000570199 SUGT1Q9Y2Z0 365 aa4.28□□□□□ -1.72
EPB42-209ENST00000570199 C2orf71A6NGG8 1288 aa4.27□□□□□ -1.73
EPB42-209ENST00000570199 SSBP05455 408 aaKnown RBP eCLIP4.27□□□□□ -1.73
EPB42-209ENST00000570199 NCAM1P13591 858 aa4.27□□□□□ -1.73
EPB42-209ENST00000570199 TACR1P25103 407 aa4.27□□□□□ -1.73
EPB42-209ENST00000570199 PMLP29590 882 aa4.27□□□□□ -1.73
EPB42-209ENST00000570199 AMPD2Q01433 879 aa4.27□□□□□ -1.73
EPB42-209ENST00000570199 ICAM4Q14773 271 aa4.27□□□□□ -1.73
EPB42-209ENST00000570199 C6orf15Q6UXA7 325 aaPredicted RBP4.27□□□□□ -1.73
EPB42-209ENST00000570199 VPS37DQ86XT2 251 aa4.27□□□□□ -1.73
EPB42-209ENST00000570199 SLC43A3Q8NBI5 491 aa4.27□□□□□ -1.73
EPB42-209ENST00000570199 MICAL1Q8TDZ2 1067 aa4.27□□□□□ -1.73
EPB42-209ENST00000570199 SREK1Q8WXA9 508 aaKnown RBP4.27□□□□□ -1.73
EPB42-209ENST00000570199 RCC1LQ96I51 464 aaKnown RBP4.27□□□□□ -1.73
EPB42-209ENST00000570199 NTMQ9P121 344 aa4.27□□□□□ -1.73
EPB42-209ENST00000570199 FBLN5Q9UBX5 448 aa4.27□□□□□ -1.73
EPB42-209ENST00000570199 AKT3Q9Y243 479 aa4.27□□□□□ -1.73
EPB42-209ENST00000570199 A0A1W2PQ27 194 aa4.26□□□□□ -1.73
EPB42-209ENST00000570199 A0A1W2PQ64 194 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms