RNA–Protein interactions for RNA: ENST00000568698.5

CDH16-208, Transcript of cadherin 16, humanhuman

TSL 5

Gene CDH16, Length 2,026 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-208ENST00000568698 GMCL1Q96IK5 515 aa18.54■□□□□ 0.56
CDH16-208ENST00000568698 NUP88Q99567 741 aaPredicted RBP18.54■□□□□ 0.56
CDH16-208ENST00000568698 GTPBP4Q9BZE4 634 aaKnown RBP18.54■□□□□ 0.56
CDH16-208ENST00000568698 VPS54Q9P1Q0 977 aa18.54■□□□□ 0.56
CDH16-208ENST00000568698 TMEM232C9JQI7 657 aa18.53■□□□□ 0.56
CDH16-208ENST00000568698 TRAPPC10P48553 1259 aa18.53■□□□□ 0.56
CDH16-208ENST00000568698 NAA30Q147X3 362 aaPredicted RBP18.53■□□□□ 0.56
CDH16-208ENST00000568698 MAD2L2Q9UI95 211 aa18.53■□□□□ 0.56
CDH16-208ENST00000568698 PARP14Q460N5 1801 aa18.53■□□□□ 0.56
CDH16-208ENST00000568698 RLFQ13129 1914 aa18.52■□□□□ 0.56
CDH16-208ENST00000568698 RAD21O60216 631 aa18.52■□□□□ 0.56
CDH16-208ENST00000568698 VCAM1P19320 739 aa18.52■□□□□ 0.56
CDH16-208ENST00000568698 HTRA3P83110 453 aa18.52■□□□□ 0.56
CDH16-208ENST00000568698 GRM4Q14833 912 aa18.52■□□□□ 0.56
CDH16-208ENST00000568698 TMEM139Q8IV31 216 aa18.52■□□□□ 0.56
CDH16-208ENST00000568698 STAG2Q8N3U4 1231 aa18.52■□□□□ 0.56
CDH16-208ENST00000568698 LPAR1Q92633 364 aa18.52■□□□□ 0.56
CDH16-208ENST00000568698 GSDMAQ96QA5 445 aa18.52■□□□□ 0.56
CDH16-208ENST00000568698 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.52■□□□□ 0.56
CDH16-208ENST00000568698 V9GY48 417 aaPredicted RBP18.52■□□□□ 0.56
CDH16-208ENST00000568698 GOLGA8HP0CJ92 632 aa18.52■□□□□ 0.55
CDH16-208ENST00000568698 ATP2B1P20020 1258 aa18.52■□□□□ 0.55
CDH16-208ENST00000568698 ZNF543Q08ER8 600 aa18.52■□□□□ 0.55
CDH16-208ENST00000568698 CYP4F22Q6NT55 531 aa18.52■□□□□ 0.55
CDH16-208ENST00000568698 REXO1L1PQ8IX06 675 aa18.52■□□□□ 0.55
CDH16-208ENST00000568698 CTCFLQ8NI51 663 aaPredicted RBP18.52■□□□□ 0.55
CDH16-208ENST00000568698 DCAF4Q8WV16 495 aa18.52■□□□□ 0.55
CDH16-208ENST00000568698 TNFRSF25Q93038 417 aa18.52■□□□□ 0.55
CDH16-208ENST00000568698 SHISA4Q96DD7 197 aa18.52■□□□□ 0.55
CDH16-208ENST00000568698 BAG1Q99933 345 aaPredicted RBP18.52■□□□□ 0.55
CDH16-208ENST00000568698 BAZ2BQ9UIF8 2168 aaKnown RBP18.52■□□□□ 0.55
CDH16-208ENST00000568698 PALM3A6NDB9 673 aaPredicted RBP18.51■□□□□ 0.55
CDH16-208ENST00000568698 PLEKHA8P1O95397 391 aa18.51■□□□□ 0.55
CDH16-208ENST00000568698 SLC1A4P43007 532 aa18.51■□□□□ 0.55
CDH16-208ENST00000568698 DMTNQ08495 405 aa18.51■□□□□ 0.55
CDH16-208ENST00000568698 SNAPC2Q13487 334 aa18.51■□□□□ 0.55
CDH16-208ENST00000568698 SPATA1Q5VX52 437 aa18.51■□□□□ 0.55
CDH16-208ENST00000568698 KCTD1Q719H9 257 aa18.51■□□□□ 0.55
CDH16-208ENST00000568698 PDILTQ8N807 584 aa18.51■□□□□ 0.55
CDH16-208ENST00000568698 CNTNAP5Q8WYK1 1306 aa18.51■□□□□ 0.55
CDH16-208ENST00000568698 A0A1B0GTH6 734 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 ZSCAN20P17040 1043 aaPredicted RBP18.5■□□□□ 0.55
CDH16-208ENST00000568698 GTF2A2P52657 109 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 ELF2Q15723 593 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 DEFB115Q30KQ5 88 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 TTC38Q5R3I4 469 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 FAM83BQ5T0W9 1011 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 TREML2Q5T2D2 321 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 TRIM65Q6PJ69 517 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 PROCA1Q8NCQ7 364 aaPredicted RBP18.5■□□□□ 0.55
CDH16-208ENST00000568698 BRI3BPQ8WY22 251 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 CCDC102AQ96A19 550 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 DHX58Q96C10 678 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 FRMPD2Q68DX3 1309 aaPredicted RBP18.5■□□□□ 0.55
CDH16-208ENST00000568698 CEP350Q5VT06 3117 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 SPDYE4A6NLX3 237 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 WDR46O15213 610 aaKnown RBP18.5■□□□□ 0.55
CDH16-208ENST00000568698 BMP3P12645 472 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 C1QTNF8P60827 252 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 ATP2C1P98194 919 aaPredicted RBP18.5■□□□□ 0.55
CDH16-208ENST00000568698 NR1I3Q14994 352 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 SLC35G1Q2M3R5 365 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 GPAT2Q6NUI2 795 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 GRAMD1CQ8IYS0 662 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 SYMPKQ92797 1274 aaKnown RBP18.5■□□□□ 0.55
CDH16-208ENST00000568698 PAGE5Q96GU1 130 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 CTAGE1Q96RT6 745 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 ZIC5Q96T25 663 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 PPP2R2CQ9Y2T4 447 aa18.5■□□□□ 0.55
CDH16-208ENST00000568698 PARP1P09874 1014 aaKnown RBP18.49■□□□□ 0.55
CDH16-208ENST00000568698 KMT5BQ4FZB7 885 aa18.49■□□□□ 0.55
CDH16-208ENST00000568698 TTBK2Q6IQ55 1244 aa18.49■□□□□ 0.55
CDH16-208ENST00000568698 USP49Q70CQ1 688 aa18.49■□□□□ 0.55
CDH16-208ENST00000568698 CPVLQ9H3G5 476 aa18.49■□□□□ 0.55
CDH16-208ENST00000568698 RPAP3Q9H6T3 665 aaPredicted RBP18.49■□□□□ 0.55
CDH16-208ENST00000568698 TMOD4Q9NZQ9 345 aa18.49■□□□□ 0.55
CDH16-208ENST00000568698 DNAI1Q9UI46 699 aa18.49■□□□□ 0.55
CDH16-208ENST00000568698 TESPA1A2RU30 521 aaPredicted RBP18.49■□□□□ 0.55
CDH16-208ENST00000568698 DPYDQ12882 1025 aa18.49■□□□□ 0.55
CDH16-208ENST00000568698 ASPRV1Q53RT3 343 aa18.49■□□□□ 0.55
CDH16-208ENST00000568698 GPATCH4Q5T3I0 446 aaKnown RBP18.49■□□□□ 0.55
CDH16-208ENST00000568698 GADL1Q6ZQY3 521 aa18.49■□□□□ 0.55
CDH16-208ENST00000568698 TC2NQ8N9U0 490 aa18.49■□□□□ 0.55
CDH16-208ENST00000568698 PANX2Q96RD6 677 aa18.49■□□□□ 0.55
CDH16-208ENST00000568698 PTPN18Q99952 460 aa18.49■□□□□ 0.55
CDH16-208ENST00000568698 SYNRGQ9UMZ2 1314 aa18.49■□□□□ 0.55
CDH16-208ENST00000568698 CCL15-CCL14A0A0B4J2E2 113 aa18.48■□□□□ 0.55
CDH16-208ENST00000568698 FAM205CA6NFA0 338 aa18.48■□□□□ 0.55
CDH16-208ENST00000568698 TPM1P09493 284 aa18.48■□□□□ 0.55
CDH16-208ENST00000568698 CETPP11597 493 aa18.48■□□□□ 0.55
CDH16-208ENST00000568698 KIF5BP33176 963 aa18.48■□□□□ 0.55
CDH16-208ENST00000568698 NPY5RQ15761 445 aa18.48■□□□□ 0.55
CDH16-208ENST00000568698 CCL15Q16663 113 aa18.48■□□□□ 0.55
CDH16-208ENST00000568698 CCDC96Q2M329 555 aa18.48■□□□□ 0.55
CDH16-208ENST00000568698 EARS2Q5JPH6 523 aaKnown RBP18.48■□□□□ 0.55
CDH16-208ENST00000568698 EPSTI1Q96J88 318 aa18.48■□□□□ 0.55
CDH16-208ENST00000568698 NAA15Q9BXJ9 866 aaKnown RBP18.48■□□□□ 0.55
CDH16-208ENST00000568698 GPCPD1Q9NPB8 672 aa18.48■□□□□ 0.55
CDH16-208ENST00000568698 FBXO28Q9NVF7 368 aa18.48■□□□□ 0.55
CDH16-208ENST00000568698 AGTPBP1Q9UPW5 1226 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms