RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 MYOZ2Q9NPC6 264 aa26.12■■□□□ 1.77
LINC00543-201ENST00000567234 RNF181Q9P0P0 153 aa26.12■■□□□ 1.77
LINC00543-201ENST00000567234 ZNF280AP59817 542 aaPredicted RBP26.11■■□□□ 1.77
LINC00543-201ENST00000567234 NUP88Q99567 741 aaPredicted RBP26.11■■□□□ 1.77
LINC00543-201ENST00000567234 MMTAG2Q9BU76 263 aaKnown RBP26.11■■□□□ 1.77
LINC00543-201ENST00000567234 LRWD1Q9UFC0 647 aa26.11■■□□□ 1.77
LINC00543-201ENST00000567234 DDX25Q9UHL0 483 aaKnown RBP26.11■■□□□ 1.77
LINC00543-201ENST00000567234 RWDD2AQ9UIY3 292 aa26.11■■□□□ 1.77
LINC00543-201ENST00000567234 AMPD3Q01432 767 aa26.11■■□□□ 1.77
LINC00543-201ENST00000567234 IKQ13123 557 aaPredicted RBP26.11■■□□□ 1.77
LINC00543-201ENST00000567234 TMEM39BQ9GZU3 492 aa26.11■■□□□ 1.77
LINC00543-201ENST00000567234 SH2D4AQ9H788 454 aa26.11■■□□□ 1.77
LINC00543-201ENST00000567234 STK17AQ9UEE5 414 aa26.11■■□□□ 1.77
LINC00543-201ENST00000567234 CYP3A7-CYP3A51PA0A087WV96 503 aa26.1■■□□□ 1.77
LINC00543-201ENST00000567234 FOSP01100 380 aaPredicted RBP26.1■■□□□ 1.77
LINC00543-201ENST00000567234 SKILP12757 684 aa26.1■■□□□ 1.77
LINC00543-201ENST00000567234 CYP3A7P24462 503 aa26.1■■□□□ 1.77
LINC00543-201ENST00000567234 CCZ1BP86790 482 aa26.1■■□□□ 1.77
LINC00543-201ENST00000567234 CCZ1P86791 482 aaPredicted RBP26.1■■□□□ 1.77
LINC00543-201ENST00000567234 ARID5BQ14865 1188 aa26.1■■□□□ 1.77
LINC00543-201ENST00000567234 CDKAL1Q5VV42 579 aa26.1■■□□□ 1.77
LINC00543-201ENST00000567234 CEP135Q66GS9 1140 aa26.1■■□□□ 1.77
LINC00543-201ENST00000567234 KLHL10Q6JEL2 608 aa26.1■■□□□ 1.77
LINC00543-201ENST00000567234 SAMSN1Q9NSI8 373 aaKnown RBP26.1■■□□□ 1.77
LINC00543-201ENST00000567234 MEIS2O14770 477 aa26.09■■□□□ 1.77
LINC00543-201ENST00000567234 PLA2G6O60733 806 aa26.09■■□□□ 1.77
LINC00543-201ENST00000567234 RHOBTB3O94955 611 aa26.09■■□□□ 1.77
LINC00543-201ENST00000567234 CAP2P40123 477 aa26.09■■□□□ 1.77
LINC00543-201ENST00000567234 STAT2P52630 851 aa26.09■■□□□ 1.77
LINC00543-201ENST00000567234 GPR162Q16538 588 aa26.09■■□□□ 1.77
LINC00543-201ENST00000567234 MBOAT7Q96N66 472 aa26.09■■□□□ 1.77
LINC00543-201ENST00000567234 C7orf25Q9BPX7 421 aa26.09■■□□□ 1.77
LINC00543-201ENST00000567234 ANO3Q9BYT9 981 aa26.09■■□□□ 1.77
LINC00543-201ENST00000567234 KLRC4O43908 158 aa26.09■■□□□ 1.77
LINC00543-201ENST00000567234 SFPQP23246 707 aaKnown RBP eCLIP26.09■■□□□ 1.77
LINC00543-201ENST00000567234 MICALL2Q8IY33 904 aa26.09■■□□□ 1.77
LINC00543-201ENST00000567234 SMYD4Q8IYR2 804 aaPredicted RBP26.09■■□□□ 1.77
LINC00543-201ENST00000567234 CCDC47Q96A33 483 aaKnown RBP26.09■■□□□ 1.77
LINC00543-201ENST00000567234 CTAGE1Q96RT6 745 aa26.09■■□□□ 1.77
LINC00543-201ENST00000567234 PRR12Q9ULL5 1215 aa26.09■■□□□ 1.77
LINC00543-201ENST00000567234 USP17L15C9J2P7 530 aa26.08■■□□□ 1.77
LINC00543-201ENST00000567234 USP17L13C9JLJ4 530 aa26.08■■□□□ 1.77
LINC00543-201ENST00000567234 USP17L11C9JVI0 530 aa26.08■■□□□ 1.77
LINC00543-201ENST00000567234 USP17L18D6R9N7 530 aa26.08■■□□□ 1.77
LINC00543-201ENST00000567234 USP17L22D6RA61 530 aa26.08■■□□□ 1.77
LINC00543-201ENST00000567234 USP17L17D6RBQ6 530 aa26.08■■□□□ 1.77
LINC00543-201ENST00000567234 USP17L19D6RCP7 530 aa26.08■■□□□ 1.77
LINC00543-201ENST00000567234 USP17L20D6RJB6 530 aa26.08■■□□□ 1.77
LINC00543-201ENST00000567234 SLC26A4O43511 780 aa26.08■■□□□ 1.77
LINC00543-201ENST00000567234 NRDCO43847 1150 aa26.08■■□□□ 1.77
LINC00543-201ENST00000567234 ECE1P42892 770 aa26.08■■□□□ 1.77
LINC00543-201ENST00000567234 USP17L24Q0WX57 530 aa26.08■■□□□ 1.77
LINC00543-201ENST00000567234 PAK1Q13153 545 aa26.08■■□□□ 1.77
LINC00543-201ENST00000567234 TPD52L1Q16890 204 aaPredicted RBP26.08■■□□□ 1.77
LINC00543-201ENST00000567234 NBPF9Q3BBW0 867 aa26.08■■□□□ 1.77
LINC00543-201ENST00000567234 USP17L6PQ6QN14 398 aa26.08■■□□□ 1.77
LINC00543-201ENST00000567234 LRRC15Q8TF66 581 aa26.08■■□□□ 1.77
LINC00543-201ENST00000567234 KCNJ6P48051 423 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 TNFAIP1Q13829 316 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 C9orf131Q5VYM1 1079 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 ARMCX5Q6P1M9 558 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 NYAP1Q6ZVC0 841 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 ACER1Q8TDN7 264 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 CRYGNQ8WXF5 182 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 INTS13Q9NVM9 706 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 CTNND2Q9UQB3 1225 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 ATAD5Q96QE3 1844 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 A0A1B0GTH6 734 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 ASNSP08243 561 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 KMT5BQ4FZB7 885 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 SAMD7Q7Z3H4 446 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 CHURC1Q8WUH1 139 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 HAS1Q92839 578 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 C16orf45Q96MC5 204 aaPredicted RBP26.07■■□□□ 1.76
LINC00543-201ENST00000567234 PLIN2Q99541 437 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 TRIM9Q9C026 710 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 VCPKMTQ9H867 229 aa26.07■■□□□ 1.76
LINC00543-201ENST00000567234 CNOT7Q9UIV1 285 aaKnown RBP26.07■■□□□ 1.76
LINC00543-201ENST00000567234 GRB10Q13322 594 aa26.06■■□□□ 1.76
LINC00543-201ENST00000567234 NR1I3Q14994 352 aa26.06■■□□□ 1.76
LINC00543-201ENST00000567234 KRT79Q5XKE5 535 aa26.06■■□□□ 1.76
LINC00543-201ENST00000567234 GIMAP8Q8ND71 665 aaPredicted RBP26.06■■□□□ 1.76
LINC00543-201ENST00000567234 BBXQ8WY36 941 aaPredicted RBP26.06■■□□□ 1.76
LINC00543-201ENST00000567234 TMEM51Q9NW97 253 aa26.06■■□□□ 1.76
LINC00543-201ENST00000567234 PPP1R2P41236 205 aa26.05■■□□□ 1.76
LINC00543-201ENST00000567234 STX17P56962 302 aa26.05■■□□□ 1.76
LINC00543-201ENST00000567234 STIM1Q13586 685 aa26.05■■□□□ 1.76
LINC00543-201ENST00000567234 ADSSL1Q8N142 457 aa26.05■■□□□ 1.76
LINC00543-201ENST00000567234 CDK5RAP3Q96JB5 506 aa26.05■■□□□ 1.76
LINC00543-201ENST00000567234 GINM1Q9NU53 330 aa26.05■■□□□ 1.76
LINC00543-201ENST00000567234 SCAF8Q9UPN6 1271 aaKnown RBP26.05■■□□□ 1.76
LINC00543-201ENST00000567234 PIK3CDO00329 1044 aa26.04■■□□□ 1.76
LINC00543-201ENST00000567234 HOXA7P31268 230 aaPredicted RBP26.04■■□□□ 1.76
LINC00543-201ENST00000567234 PRCPP42785 496 aa26.04■■□□□ 1.76
LINC00543-201ENST00000567234 SPAG1Q07617 926 aa26.04■■□□□ 1.76
LINC00543-201ENST00000567234 TBC1D10BQ4KMP7 808 aaPredicted RBP26.04■■□□□ 1.76
LINC00543-201ENST00000567234 SV2BQ7L1I2 683 aa26.04■■□□□ 1.76
LINC00543-201ENST00000567234 APTXQ7Z2E3 356 aaKnown RBP26.04■■□□□ 1.76
LINC00543-201ENST00000567234 FAM160B2Q86V87 743 aa26.04■■□□□ 1.76
LINC00543-201ENST00000567234 SPICE1Q8N0Z3 855 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms