RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 FIGNQ5HY92 759 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 CCDC70Q6NSX1 233 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 USP49Q70CQ1 688 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 HDXQ7Z353 690 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 ZNF804AQ7Z570 1209 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 CTAGE6Q86UF2 777 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 RETREG3Q86VR2 466 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 NBPF5PQ86XG9 351 aaPredicted RBP8.39□□□□□ -1.07
CFDP1-202ENST00000562602 CTAGE4Q8IX94 777 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 CMTR1Q8N1G2 835 aaKnown RBP8.39□□□□□ -1.07
CFDP1-202ENST00000562602 C4orf32Q8N8J7 132 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 MSANTD4Q8NCY6 345 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 PNMA1Q8ND90 353 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 RASSF8Q8NHQ8 419 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 MED15Q96RN5 788 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 WDR24Q96S15 920 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 NAP1L4Q99733 375 aaKnown RBP8.39□□□□□ -1.07
CFDP1-202ENST00000562602 SPZ1Q9BXG8 430 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 PARD6BQ9BYG5 372 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 RAB34Q9BZG1 259 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 ABHD10Q9NUJ1 306 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 ZNF446Q9NWS9 450 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 MCM9Q9NXL9 1143 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 BARHL2Q9NY43 387 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 PSD3Q9NYI0 1048 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 CAPN11Q9UMQ6 739 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.39□□□□□ -1.07
CFDP1-202ENST00000562602 SLIT2O94813 1529 aa8.39□□□□□ -1.07
CFDP1-202ENST00000562602 ECM29Q5VYK3 1845 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 WNK3Q9BYP7 1800 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 XDHP47989 1333 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 A0A087X0B3 334 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 A0A1W2PQJ5 194 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 ESYT2A0FGR8 921 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 TTC24A2A3L6 582 aaPredicted RBP8.38□□□□□ -1.07
CFDP1-202ENST00000562602 SOWAHDA6NJG2 315 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 SNAP23O00161 211 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 AXIN1O15169 862 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 NPHP1O15259 732 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 TEX33O43247 280 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 KRT86O43790 486 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 PRDM1O75626 825 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 GYPCP04921 128 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 TSPY3P0CV98 308 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 TSPY8P0CW00 308 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 KRT9P35527 623 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 STX17P56962 302 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 UBXN1Q04323 297 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 NONOQ15233 471 aaKnown RBP eCLIP8.38□□□□□ -1.07
CFDP1-202ENST00000562602 ZNF569Q5MCW4 686 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 SOGA3Q5TF21 947 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 CNNM4Q6P4Q7 775 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 RAD9BQ6WBX8 426 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 MB21D1Q8N884 522 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 GIMAP8Q8ND71 665 aaPredicted RBP8.38□□□□□ -1.07
CFDP1-202ENST00000562602 DNAJC7Q99615 494 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 C7orf25Q9BPX7 421 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 UBXN6Q9BZV1 441 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 TSPYL1Q9H0U9 437 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 GLT8D2Q9H1C3 349 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 KBTBD4Q9NVX7 518 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 CWC15Q9P013 229 aaKnown RBP8.38□□□□□ -1.07
CFDP1-202ENST00000562602 GMPR2Q9P2T1 348 aaKnown RBP8.38□□□□□ -1.07
CFDP1-202ENST00000562602 SEC63Q9UGP8 760 aaKnown RBP8.38□□□□□ -1.07
CFDP1-202ENST00000562602 DLEC1Q9Y238 1755 aa8.38□□□□□ -1.07
CFDP1-202ENST00000562602 DOT1LQ8TEK3 1739 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 CACNA1SQ13698 1873 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 PVALEFA0A1B0GWK0 134 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 ANO9A1A5B4 782 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 TARSL2A2RTX5 802 aaKnown RBP8.37□□□□□ -1.07
CFDP1-202ENST00000562602 PALM3A6NDB9 673 aaPredicted RBP8.37□□□□□ -1.07
CFDP1-202ENST00000562602 MOXD2PA6NHM9 499 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 M0R2N6 131 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 PSMD14O00487 310 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 PARP1P09874 1014 aaKnown RBP8.37□□□□□ -1.07
CFDP1-202ENST00000562602 CCNE1P24864 410 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 RXRBP28702 533 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 CYP2C19P33261 490 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 PLA2G4AP47712 749 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 ZBED6P86452 979 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 PSMD2Q13200 908 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 SMC1AQ14683 1233 aaKnown RBP8.37□□□□□ -1.07
CFDP1-202ENST00000562602 SEPT2Q15019 361 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 KARSQ15046 597 aaKnown RBP8.37□□□□□ -1.07
CFDP1-202ENST00000562602 TMEM266Q2M3C6 531 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 CTC1Q2NKJ3 1217 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 EARS2Q5JPH6 523 aaKnown RBP8.37□□□□□ -1.07
CFDP1-202ENST00000562602 FKBP15Q5T1M5 1219 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 RCSD1Q6JBY9 416 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 CCDC84Q86UT8 332 aaPredicted RBP8.37□□□□□ -1.07
CFDP1-202ENST00000562602 TBC1D22AQ8WUA7 517 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 CPLX3Q8WVH0 158 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 CELF1Q92879 486 aaKnown RBP8.37□□□□□ -1.07
CFDP1-202ENST00000562602 EXOC4Q96A65 974 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 RRP36Q96EU6 259 aaKnown RBP8.37□□□□□ -1.07
CFDP1-202ENST00000562602 CALML4Q96GE6 196 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 ACSBG1Q96GR2 724 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 EDEM3Q9BZQ6 932 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 ZMYND12Q9H0C1 365 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 NUCKS1Q9H1E3 243 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms