RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 CDC25AP30304 524 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 PDE6CP51160 858 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 HDLBPQ00341 1268 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 ELAC2Q9BQ52 826 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 PCDH11XQ9BZA7 1347 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 PCDH11YQ9BZA8 1340 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 YWHAGP61981 247 aaKnown RBP eCLIP11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 DPP8Q6V1X1 898 aaPredicted RBP11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 PLA2G4DQ86XP0 818 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 PPM1KQ8N3J5 372 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 TSC22D3Q99576 134 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 SPATA31E1Q6ZUB1 1445 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 FAM26FQ5R3K3 315 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 SCYL2Q6P3W7 929 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 NEK8Q86SG6 692 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 P2RX5Q93086 422 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 GJA10Q969M2 543 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 ANLNQ9NQW6 1124 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 LOC102724159A0A0B4J2E5 919 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 WDR91A4D1P6 747 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 BFSP1Q12934 665 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 NR5A1Q13285 461 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 PWP2Q15269 919 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 TRIP13Q15645 432 aaPredicted RBP11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 ZNF496Q96IT1 587 aaPredicted RBP11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 ZNF521Q96K83 1311 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 MAP3K7O43318 606 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 CACNB1Q02641 598 aaPredicted RBP11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 KRT81Q14533 505 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 KRT27Q7Z3Y8 459 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 PDZD8Q8NEN9 1154 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 ENOX1Q8TC92 643 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 KCNV2Q8TDN2 545 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 MRPL46Q9H2W6 279 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 PCDHA12Q9UN75 941 aa11.12□□□□□ -0.63
GTF3C1-202ENST00000561623 EVI5O60447 810 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 SLC12A2P55011 1212 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 RPS6KA2Q15349 733 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 ZNF658Q5TYW1 1059 aaPredicted RBP11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 PDLIM2Q96JY6 352 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 SCYL1Q96KG9 808 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 RUNDC3BQ96NL0 473 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 AIFM3Q96NN9 605 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 IFT122Q9HBG6 1241 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 DBNLQ9UJU6 430 aaKnown RBP11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 HOOK2Q96ED9 719 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 GLT8D2Q9H1C3 349 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 CNOT10Q9H9A5 744 aaKnown RBP11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 TXLNGQ9NUQ3 528 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 H0Y3Z8 333 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 FMNL1O95466 1100 aaPredicted RBP11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 SLFNL1Q499Z3 407 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 FAM182BQ5T319 152 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 GOLPH3LQ9H4A5 285 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 DNAJC17Q9NVM6 304 aaKnown RBP11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 MFAP3LO75121 409 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 FAM102BQ5T8I3 360 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 TTBK2Q6IQ55 1244 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 SUPT20HQ8NEM7 779 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 PIP4K2CQ8TBX8 421 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 MAD1L1Q9Y6D9 718 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 MROH5Q6ZUA9 1318 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 SARM1Q6SZW1 724 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 DDX25Q9UHL0 483 aaKnown RBP11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 DNMT1P26358 1616 aaKnown RBP11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 K7ENM7 598 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 ADORA1P30542 326 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 SLC8A3P57103 927 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 HSP90AA5PQ58FG0 334 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 APOA5Q6Q788 366 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 IL17REQ8NFR9 667 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 NOP53Q9NZM5 478 aaKnown RBP11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 MRFAP1Q9Y605 127 aa11.11□□□□□ -0.63
GTF3C1-202ENST00000561623 KIF21AQ7Z4S6 1674 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 HMGB1P1B2RPK0 211 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 STAM2O75886 525 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 TMTC3Q6ZXV5 915 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 ARMC9Q7Z3E5 817 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 FAM167BQ9BTA0 163 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 FOXP1Q9H334 677 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 SEPT10Q9P0V9 454 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 RWDD2AQ9UIY3 292 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 PDHA1P08559 390 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 TCP10Q12799 353 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 ARHGEF18Q6ZSZ5 1173 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 PNMA1Q8ND90 353 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 CCDC127Q96BQ5 260 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 CYTH2Q99418 400 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 CHUKO15111 745 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 DLATP10515 647 aaKnown RBP11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 KCNA6P17658 529 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 PGBD1Q96JS3 809 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 PRDM5Q9NQX1 630 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 CCDC85CA6NKD9 419 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 SGK1O00141 431 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 NOP56O00567 594 aaKnown RBP11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 GAS7O60861 476 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 KIF11P52732 1056 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 CPXCR1Q8N123 301 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms