RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 TTLL11Q8NHH1 800 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 RIC8AQ9NPQ8 531 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 PRR36Q9H6K5 1346 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 CARMIL3Q8ND23 1372 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 I3L4J1 428 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 PFDN6O15212 129 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 PRKAB2O43741 272 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 CYP21A2P08686 494 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 PPP2R5EQ16537 467 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 HHATQ5VTY9 493 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 HLFQ16534 295 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 STMN2Q93045 179 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 CACYBPQ9HB71 228 aaKnown RBP14.72□□□□□ -0.05
TRAF3-208ENST00000560371 NARFQ9UHQ1 456 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 SNX25Q9H3E2 840 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 SEPT10Q9P0V9 454 aa14.72□□□□□ -0.05
TRAF3-208ENST00000560371 CEP152O94986 1710 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 CDK8P49336 464 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 SATB1Q01826 763 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 SAR1BQ9Y6B6 198 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 MYO3BQ8WXR4 1341 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 A6NJR5 290 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 KCNK3O14649 394 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 GAP43P17677 238 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 ZNF445P59923 1031 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 LMBRD1Q9NUN5 540 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 CLIC4Q9Y696 253 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 ARHGEF37A1IGU5 675 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 NR2F2P24468 414 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 TMEM179Q6ZVK1 233 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 PCDHA7Q9UN72 937 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 MYO9BQ13459 2157 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 NSFP46459 744 aaKnown RBP14.71□□□□□ -0.05
TRAF3-208ENST00000560371 TFAMQ00059 246 aaKnown RBP14.71□□□□□ -0.05
TRAF3-208ENST00000560371 PI16Q6UXB8 463 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 ZNF589Q86UQ0 364 aaPredicted RBP14.71□□□□□ -0.05
TRAF3-208ENST00000560371 MTMR6Q9Y217 621 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 ADRA2BP18089 450 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 ZNF827Q17R98 1081 aa14.71□□□□□ -0.05
TRAF3-208ENST00000560371 PSDA5PKW4 1024 aaPredicted RBP14.71□□□□□ -0.06
TRAF3-208ENST00000560371 RASGRF1Q13972 1273 aa14.71□□□□□ -0.06
TRAF3-208ENST00000560371 NT5C1BQ96P26 610 aa14.71□□□□□ -0.06
TRAF3-208ENST00000560371 LSG1Q9H089 658 aaKnown RBP14.71□□□□□ -0.06
TRAF3-208ENST00000560371 PUS7LQ9H0K6 701 aaKnown RBP14.71□□□□□ -0.06
TRAF3-208ENST00000560371 CCDC68Q9H2F9 335 aa14.71□□□□□ -0.06
TRAF3-208ENST00000560371 CROCC2H7BZ55 1655 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 PTPN12Q05209 780 aaKnown RBP14.7□□□□□ -0.06
TRAF3-208ENST00000560371 SLC27A3Q5K4L6 730 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 DYNLL2Q96FJ2 89 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 DDX41Q9UJV9 622 aaKnown RBP14.7□□□□□ -0.06
TRAF3-208ENST00000560371 MYL7Q01449 175 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 RC3H1Q5TC82 1133 aaKnown RBP14.7□□□□□ -0.06
TRAF3-208ENST00000560371 PIGSQ96S52 555 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 ABCC3O15438 1527 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 GH2P01242 217 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 RPS6KA2Q15349 733 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 GPR101Q96P66 508 aaPredicted RBP14.7□□□□□ -0.06
TRAF3-208ENST00000560371 PLCB1Q9NQ66 1216 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 QRICH2Q9H0J4 1663 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 RINT1Q6NUQ1 792 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 FAM149B1Q96BN6 582 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 VPS37BQ9H9H4 285 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 hCG_1984214I3L0E3 225 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 CIB2O75838 187 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 MARK3P27448 753 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 ADCK5Q3MIX3 580 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 MTERF2Q49AM1 385 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 KAZNQ674X7 775 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 ZNF713Q8N859 430 aaPredicted RBP14.7□□□□□ -0.06
TRAF3-208ENST00000560371 PSMC2P35998 433 aaKnown RBP14.7□□□□□ -0.06
TRAF3-208ENST00000560371 VPS41P49754 854 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 SPATA1Q5VX52 437 aa14.7□□□□□ -0.06
TRAF3-208ENST00000560371 SRGAP2CP0DJJ0 459 aa14.69□□□□□ -0.06
TRAF3-208ENST00000560371 XPAP23025 273 aaPredicted RBP14.69□□□□□ -0.06
TRAF3-208ENST00000560371 NLRP4Q96MN2 994 aa14.69□□□□□ -0.06
TRAF3-208ENST00000560371 CYP2D7A0A087X1C5 515 aa14.69□□□□□ -0.06
TRAF3-208ENST00000560371 KRIT1O00522 736 aa14.69□□□□□ -0.06
TRAF3-208ENST00000560371 PHBP35232 272 aa14.69□□□□□ -0.06
TRAF3-208ENST00000560371 P3H4Q92791 437 aa14.69□□□□□ -0.06
TRAF3-208ENST00000560371 C7orf31Q8N865 590 aa14.69□□□□□ -0.06
TRAF3-208ENST00000560371 CRKP46108 304 aa14.69□□□□□ -0.06
TRAF3-208ENST00000560371 SKA2Q8WVK7 121 aaPredicted RBP14.69□□□□□ -0.06
TRAF3-208ENST00000560371 ACCSQ96QU6 501 aa14.69□□□□□ -0.06
TRAF3-208ENST00000560371 FANCLQ9NW38 375 aa14.69□□□□□ -0.06
TRAF3-208ENST00000560371 CPSF3Q9UKF6 684 aaKnown RBP14.69□□□□□ -0.06
TRAF3-208ENST00000560371 CDC42BPBQ9Y5S2 1711 aa14.69□□□□□ -0.06
TRAF3-208ENST00000560371 MYO1FO00160 1098 aa14.69□□□□□ -0.06
TRAF3-208ENST00000560371 CCDC62Q6P9F0 684 aa14.69□□□□□ -0.06
TRAF3-208ENST00000560371 GRK7Q8WTQ7 553 aa14.69□□□□□ -0.06
TRAF3-208ENST00000560371 OSBP2Q969R2 916 aa14.69□□□□□ -0.06
TRAF3-208ENST00000560371 MFAP3P55082 362 aa14.69□□□□□ -0.06
TRAF3-208ENST00000560371 PI4K2BQ8TCG2 481 aa14.69□□□□□ -0.06
TRAF3-208ENST00000560371 BZW2Q9Y6E2 419 aaKnown RBP14.69□□□□□ -0.06
TRAF3-208ENST00000560371 PNMA6FA0A0J9YX94 578 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 PSAPP07602 524 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 EIF2AK2P19525 551 aaKnown RBP14.68□□□□□ -0.06
TRAF3-208ENST00000560371 RNF207Q6ZRF8 634 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 CYP27B1O15528 508 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 PODNQ7Z5L7 613 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 MAP7D3Q8IWC1 876 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms