RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 USP17L13C9JLJ4 530 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 USP17L11C9JVI0 530 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 USP17L18D6R9N7 530 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 USP17L22D6RA61 530 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 USP17L17D6RBQ6 530 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 USP17L19D6RCP7 530 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 USP17L20D6RJB6 530 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 EBAG9O00559 213 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 ATP1A1P05023 1023 aaKnown RBP17.09■□□□□ 0.33
AP4E1-202ENST00000558439 EPB41P11171 864 aaKnown RBP17.09■□□□□ 0.33
AP4E1-202ENST00000558439 USP17L24Q0WX57 530 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 MAN2A1Q16706 1144 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 USP17L6PQ6QN14 398 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 MYCT1Q8N699 235 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 CTNNBL1Q8WYA6 563 aaPredicted RBP17.09■□□□□ 0.33
AP4E1-202ENST00000558439 NT5C3AQ9H0P0 336 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 MLXIPQ9HAP2 919 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 HYOU1Q9Y4L1 999 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 TLDC2A0PJX2 215 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 KRT13P13646 458 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 KIF11P52732 1056 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 MDM2Q00987 491 aaPredicted RBP17.09■□□□□ 0.33
AP4E1-202ENST00000558439 MICALL1Q8N3F8 863 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 TBC1D5Q92609 795 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 DBNDD1Q9H9R9 158 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 FAM205AQ6ZU69 1335 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 FTCDO95954 541 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 SLFN13Q68D06 897 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 STXBP4Q6ZWJ1 553 aa17.09■□□□□ 0.33
AP4E1-202ENST00000558439 TTLL1O95922 423 aa17.08■□□□□ 0.33
AP4E1-202ENST00000558439 H2AFXP16104 143 aaPredicted RBP17.08■□□□□ 0.33
AP4E1-202ENST00000558439 SARSP49591 514 aaKnown RBP17.08■□□□□ 0.33
AP4E1-202ENST00000558439 TNNC1P63316 161 aa17.08■□□□□ 0.33
AP4E1-202ENST00000558439 UBXN2AP68543 259 aa17.08■□□□□ 0.33
AP4E1-202ENST00000558439 FKBP3Q00688 224 aaKnown RBP17.08■□□□□ 0.33
AP4E1-202ENST00000558439 CCDC174Q6PII3 467 aa17.08■□□□□ 0.33
AP4E1-202ENST00000558439 TRIM9Q9C026 710 aa17.08■□□□□ 0.33
AP4E1-202ENST00000558439 ARMCX3Q9UH62 379 aaPredicted RBP17.08■□□□□ 0.33
AP4E1-202ENST00000558439 TACC3Q9Y6A5 838 aa17.08■□□□□ 0.33
AP4E1-202ENST00000558439 ERVK-24P63145 666 aa17.08■□□□□ 0.32
AP4E1-202ENST00000558439 KCTD16Q68DU8 428 aa17.08■□□□□ 0.32
AP4E1-202ENST00000558439 NALCNQ8IZF0 1738 aa17.08■□□□□ 0.32
AP4E1-202ENST00000558439 RGPD2P0DJD1 1756 aa17.08■□□□□ 0.32
AP4E1-202ENST00000558439 KCNK3O14649 394 aa17.08■□□□□ 0.32
AP4E1-202ENST00000558439 ATP1A2P50993 1020 aa17.08■□□□□ 0.32
AP4E1-202ENST00000558439 SF3A3Q12874 501 aaKnown RBP eCLIP17.08■□□□□ 0.32
AP4E1-202ENST00000558439 CERKLQ49MI3 558 aaPredicted RBP17.08■□□□□ 0.32
AP4E1-202ENST00000558439 VWA3BQ502W6 1294 aa17.08■□□□□ 0.32
AP4E1-202ENST00000558439 RETREG2Q8NC44 543 aa17.08■□□□□ 0.32
AP4E1-202ENST00000558439 NOA1Q8NC60 698 aaKnown RBP17.08■□□□□ 0.32
AP4E1-202ENST00000558439 RPGRIP1Q96KN7 1286 aa17.08■□□□□ 0.32
AP4E1-202ENST00000558439 PCDHA13Q9Y5I0 950 aa17.08■□□□□ 0.32
AP4E1-202ENST00000558439 ZNF185O15231 689 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 RNF40O75150 1001 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 GDF11O95390 407 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 ABCB4P21439 1286 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 RPS6KA1Q15418 735 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 TMEM132AQ24JP5 1023 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 MAGEF1Q9HAY2 307 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 SPATA31A1Q5TZJ5 1347 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 MYL1P05976 194 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 PLA2G4AP47712 749 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 GPSM2P81274 684 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 SP4Q02446 784 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 ARHGAP44Q17R89 818 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 ASPRV1Q53RT3 343 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 UBLCP1Q8WVY7 318 aaPredicted RBP17.07■□□□□ 0.32
AP4E1-202ENST00000558439 ADAMTS1Q9UHI8 967 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 BCL9O00512 1426 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 NR2F2P24468 414 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 ADAT2Q7Z6V5 191 aaKnown RBP17.07■□□□□ 0.32
AP4E1-202ENST00000558439 IFT20Q8IY31 132 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 FHOD1Q9Y613 1164 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 E9PMD0 336 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 TCP1P17987 556 aaKnown RBP17.07■□□□□ 0.32
AP4E1-202ENST00000558439 FAM133AQ8N9E0 248 aa17.07■□□□□ 0.32
AP4E1-202ENST00000558439 CLIC2O15247 247 aa17.06■□□□□ 0.32
AP4E1-202ENST00000558439 XRCC5P13010 732 aaKnown RBP17.06■□□□□ 0.32
AP4E1-202ENST00000558439 GUCY2DQ02846 1103 aa17.06■□□□□ 0.32
AP4E1-202ENST00000558439 TTBK2Q6IQ55 1244 aa17.06■□□□□ 0.32
AP4E1-202ENST00000558439 RASSF4Q9H2L5 321 aa17.06■□□□□ 0.32
AP4E1-202ENST00000558439 RASA1P20936 1047 aa17.06■□□□□ 0.32
AP4E1-202ENST00000558439 RBM26Q5T8P6 1007 aaKnown RBP17.06■□□□□ 0.32
AP4E1-202ENST00000558439 LRRC53A6NM62 1247 aa17.06■□□□□ 0.32
AP4E1-202ENST00000558439 CYP2J2P51589 502 aa17.06■□□□□ 0.32
AP4E1-202ENST00000558439 ICA1Q05084 483 aa17.06■□□□□ 0.32
AP4E1-202ENST00000558439 SBK1Q52WX2 424 aa17.06■□□□□ 0.32
AP4E1-202ENST00000558439 CCDC170Q8IYT3 715 aa17.06■□□□□ 0.32
AP4E1-202ENST00000558439 OGFOD1Q8N543 542 aa17.06■□□□□ 0.32
AP4E1-202ENST00000558439 FAM71BQ8TC56 605 aa17.06■□□□□ 0.32
AP4E1-202ENST00000558439 U2AF1L4Q8WU68 220 aaKnown RBP17.06■□□□□ 0.32
AP4E1-202ENST00000558439 MMS19Q96T76 1030 aa17.06■□□□□ 0.32
AP4E1-202ENST00000558439 STK17AQ9UEE5 414 aa17.06■□□□□ 0.32
AP4E1-202ENST00000558439 USP17L10C9JJH3 530 aa17.05■□□□□ 0.32
AP4E1-202ENST00000558439 NCK2O43639 380 aa17.05■□□□□ 0.32
AP4E1-202ENST00000558439 AKR1B1P15121 316 aa17.05■□□□□ 0.32
AP4E1-202ENST00000558439 CPXCR1Q8N123 301 aa17.05■□□□□ 0.32
AP4E1-202ENST00000558439 DYDC1Q8WWB3 177 aa17.05■□□□□ 0.32
AP4E1-202ENST00000558439 EHMT1Q9H9B1 1298 aa17.05■□□□□ 0.32
AP4E1-202ENST00000558439 COL4A3BPQ9Y5P4 624 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms