RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 SF3A1Q15459 793 aaKnown RBP7.73□□□□□ -1.17
HIF1A-209ENST00000556827 PLEKHN1Q494U1 663 aaPredicted RBP7.73□□□□□ -1.17
HIF1A-209ENST00000556827 BICRALQ6AI39 1079 aa7.73□□□□□ -1.17
HIF1A-209ENST00000556827 LILRA6Q6PI73 481 aa7.73□□□□□ -1.17
HIF1A-209ENST00000556827 PANK1Q8TE04 598 aa7.73□□□□□ -1.17
HIF1A-209ENST00000556827 FGD4Q96M96 766 aa7.73□□□□□ -1.17
HIF1A-209ENST00000556827 DNAJC2Q99543 621 aaKnown RBP7.73□□□□□ -1.17
HIF1A-209ENST00000556827 KLHL25Q9H0H3 589 aa7.73□□□□□ -1.17
HIF1A-209ENST00000556827 ZCCHC4Q9H5U6 513 aa7.73□□□□□ -1.17
HIF1A-209ENST00000556827 PPM1BO75688 479 aa7.72□□□□□ -1.17
HIF1A-209ENST00000556827 DDAH1O94760 285 aa7.72□□□□□ -1.17
HIF1A-209ENST00000556827 EPHX1P07099 455 aa7.72□□□□□ -1.17
HIF1A-209ENST00000556827 TACR1P25103 407 aa7.72□□□□□ -1.17
HIF1A-209ENST00000556827 AFF3P51826 1226 aaKnown RBP7.72□□□□□ -1.17
HIF1A-209ENST00000556827 NR1I3Q14994 352 aa7.72□□□□□ -1.17
HIF1A-209ENST00000556827 LDHDQ86WU2 507 aa7.72□□□□□ -1.17
HIF1A-209ENST00000556827 FAM178BQ8IXR5 827 aa7.72□□□□□ -1.17
HIF1A-209ENST00000556827 CKAP2LQ8IYA6 745 aa7.72□□□□□ -1.17
HIF1A-209ENST00000556827 PDLIM7Q9NR12 457 aa7.72□□□□□ -1.17
HIF1A-209ENST00000556827 STXBP3O00186 592 aa7.71□□□□□ -1.18
HIF1A-209ENST00000556827 GJB6O95452 261 aa7.71□□□□□ -1.18
HIF1A-209ENST00000556827 MAPKAPK2P49137 400 aa7.71□□□□□ -1.18
HIF1A-209ENST00000556827 CBX2Q14781 532 aaPredicted RBP7.71□□□□□ -1.18
HIF1A-209ENST00000556827 FXNQ16595 210 aa7.71□□□□□ -1.18
HIF1A-209ENST00000556827 EEF1DP3Q658K8 133 aa7.71□□□□□ -1.18
HIF1A-209ENST00000556827 MRM1Q6IN84 353 aaKnown RBP7.71□□□□□ -1.18
HIF1A-209ENST00000556827 ZC3H14Q6PJT7 736 aaKnown RBP7.71□□□□□ -1.18
HIF1A-209ENST00000556827 PMFBP1Q8TBY8 1022 aa7.71□□□□□ -1.18
HIF1A-209ENST00000556827 DRC1Q96MC2 740 aa7.71□□□□□ -1.18
HIF1A-209ENST00000556827 KRTAP4-7Q9BYR0 210 aa7.71□□□□□ -1.18
HIF1A-209ENST00000556827 SUSD2Q9UGT4 822 aa7.71□□□□□ -1.18
HIF1A-209ENST00000556827 RAPGEFL1Q9UHV5 662 aa7.71□□□□□ -1.18
HIF1A-209ENST00000556827 SUGT1Q9Y2Z0 365 aa7.71□□□□□ -1.18
HIF1A-209ENST00000556827 KIAA0556O60303 1618 aa7.7□□□□□ -1.18
HIF1A-209ENST00000556827 IRS4O14654 1257 aaPredicted RBP7.7□□□□□ -1.18
HIF1A-209ENST00000556827 L1CAMP32004 1257 aa7.7□□□□□ -1.18
HIF1A-209ENST00000556827 NCKAP1LP55160 1127 aa7.7□□□□□ -1.18
HIF1A-209ENST00000556827 ZNF200P98182 395 aaPredicted RBP7.7□□□□□ -1.18
HIF1A-209ENST00000556827 RAB33AQ14088 237 aa7.7□□□□□ -1.18
HIF1A-209ENST00000556827 DPY19L1Q2PZI1 675 aa7.7□□□□□ -1.18
HIF1A-209ENST00000556827 RCSD1Q6JBY9 416 aa7.7□□□□□ -1.18
HIF1A-209ENST00000556827 CNKSR3Q6P9H4 555 aa7.7□□□□□ -1.18
HIF1A-209ENST00000556827 IGDCC3Q8IVU1 814 aa7.7□□□□□ -1.18
HIF1A-209ENST00000556827 TRIM55Q9BYV6 548 aa7.7□□□□□ -1.18
HIF1A-209ENST00000556827 PARD6AQ9NPB6 346 aa7.7□□□□□ -1.18
HIF1A-209ENST00000556827 CGGBP1Q9UFW8 167 aaPredicted RBP7.7□□□□□ -1.18
HIF1A-209ENST00000556827 ZCCHC11Q5TAX3 1644 aaKnown RBP7.7□□□□□ -1.18
HIF1A-209ENST00000556827 PHLDB1Q86UU1 1377 aa7.7□□□□□ -1.18
HIF1A-209ENST00000556827 MAGI3Q5TCQ9 1506 aa7.69□□□□□ -1.18
HIF1A-209ENST00000556827 CYBBP04839 570 aa7.69□□□□□ -1.18
HIF1A-209ENST00000556827 DBHP09172 617 aa7.69□□□□□ -1.18
HIF1A-209ENST00000556827 SEPHS1P49903 392 aa7.69□□□□□ -1.18
HIF1A-209ENST00000556827 CORO7P57737 925 aa7.69□□□□□ -1.18
HIF1A-209ENST00000556827 AMPD2Q01433 879 aa7.69□□□□□ -1.18
HIF1A-209ENST00000556827 RBL2Q08999 1139 aa7.69□□□□□ -1.18
HIF1A-209ENST00000556827 PAQR3Q6TCH7 311 aa7.69□□□□□ -1.18
HIF1A-209ENST00000556827 DACT3Q96B18 629 aaPredicted RBP7.69□□□□□ -1.18
HIF1A-209ENST00000556827 LGR4Q9BXB1 951 aa7.69□□□□□ -1.18
HIF1A-209ENST00000556827 DBR1Q9UK59 544 aaKnown RBP7.69□□□□□ -1.18
HIF1A-209ENST00000556827 PCDHA5Q9Y5H7 936 aa7.69□□□□□ -1.18
HIF1A-209ENST00000556827 MAP3K4Q9Y6R4 1608 aa7.69□□□□□ -1.18
HIF1A-209ENST00000556827 ARID4BQ4LE39 1312 aaPredicted RBP7.69□□□□□ -1.18
HIF1A-209ENST00000556827 AURKAO14965 403 aa7.68□□□□□ -1.18
HIF1A-209ENST00000556827 SRGAP3O43295 1099 aa7.68□□□□□ -1.18
HIF1A-209ENST00000556827 BUB1BO60566 1050 aaPredicted RBP7.68□□□□□ -1.18
HIF1A-209ENST00000556827 VAMP4O75379 141 aa7.68□□□□□ -1.18
HIF1A-209ENST00000556827 PFKLP17858 780 aa7.68□□□□□ -1.18
HIF1A-209ENST00000556827 HOXA5P20719 270 aa7.68□□□□□ -1.18
HIF1A-209ENST00000556827 CTSWP56202 376 aa7.68□□□□□ -1.18
HIF1A-209ENST00000556827 NCAPHQ15003 741 aa7.68□□□□□ -1.18
HIF1A-209ENST00000556827 DDR2Q16832 855 aa7.68□□□□□ -1.18
HIF1A-209ENST00000556827 MCMBPQ9BTE3 642 aa7.68□□□□□ -1.18
HIF1A-209ENST00000556827 APEX2Q9UBZ4 518 aa7.68□□□□□ -1.18
HIF1A-209ENST00000556827 BACE2Q9Y5Z0 518 aa7.68□□□□□ -1.18
HIF1A-209ENST00000556827 TRIM13O60858 407 aa7.67□□□□□ -1.18
HIF1A-209ENST00000556827 CABP7Q86V35 215 aa7.67□□□□□ -1.18
HIF1A-209ENST00000556827 FAM129CQ86XR2 697 aa7.67□□□□□ -1.18
HIF1A-209ENST00000556827 TMEFF1Q8IYR6 380 aa7.67□□□□□ -1.18
HIF1A-209ENST00000556827 ARMC5Q96C12 935 aa7.67□□□□□ -1.18
HIF1A-209ENST00000556827 PWWP2AQ96N64 755 aa7.67□□□□□ -1.18
HIF1A-209ENST00000556827 HIRIP3Q9BW71 556 aaPredicted RBP7.67□□□□□ -1.18
HIF1A-209ENST00000556827 EPB41L4AQ9HCS5 686 aaPredicted RBP7.67□□□□□ -1.18
HIF1A-209ENST00000556827 PPRC1Q5VV67 1664 aaKnown RBP7.67□□□□□ -1.18
HIF1A-209ENST00000556827 ANKRD34BA5PLL1 514 aa7.66□□□□□ -1.18
HIF1A-209ENST00000556827 PLEKHD1A6NEE1 506 aa7.66□□□□□ -1.18
HIF1A-209ENST00000556827 C2orf71A6NGG8 1288 aa7.66□□□□□ -1.18
HIF1A-209ENST00000556827 CCDC85CA6NKD9 419 aa7.66□□□□□ -1.18
HIF1A-209ENST00000556827 F8W031 263 aaPredicted RBP7.66□□□□□ -1.18
HIF1A-209ENST00000556827 GRB10Q13322 594 aa7.66□□□□□ -1.18
HIF1A-209ENST00000556827 TARBP2Q15633 366 aaKnown RBP7.66□□□□□ -1.18
HIF1A-209ENST00000556827 ZNF513Q8N8E2 541 aaPredicted RBP7.66□□□□□ -1.18
HIF1A-209ENST00000556827 MARCH10Q8NA82 808 aaPredicted RBP7.66□□□□□ -1.18
HIF1A-209ENST00000556827 PPP1R14AQ96A00 147 aa7.66□□□□□ -1.18
HIF1A-209ENST00000556827 KCNC2Q96PR1 638 aa7.66□□□□□ -1.18
HIF1A-209ENST00000556827 USP35Q9P2H5 1018 aa7.66□□□□□ -1.18
HIF1A-209ENST00000556827 SUSD5O60279 629 aa7.65□□□□□ -1.18
HIF1A-209ENST00000556827 SASH1O94885 1247 aa7.65□□□□□ -1.18
HIF1A-209ENST00000556827 RAPGEF3O95398 923 aa7.65□□□□□ -1.18
HIF1A-209ENST00000556827 VMACQ2NL98 169 aa7.65□□□□□ -1.18
HIF1A-209ENST00000556827 ARHGEF39Q8N4T4 335 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms