RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 TEX2Q8IWB9 1127 aa6.65□□□□□ -1.34
SRP54-211ENST00000556445 CCDC144CPQ8IYA2 1237 aa6.65□□□□□ -1.34
SRP54-211ENST00000556445 LILRA2Q8N149 483 aa6.65□□□□□ -1.34
SRP54-211ENST00000556445 ANKS4BQ8N8V4 417 aa6.65□□□□□ -1.34
SRP54-211ENST00000556445 SMARCC1Q92922 1105 aaPredicted RBP6.65□□□□□ -1.34
SRP54-211ENST00000556445 SHDQ96IW2 340 aa6.65□□□□□ -1.34
SRP54-211ENST00000556445 SRRTQ9BXP5 876 aaKnown RBP6.65□□□□□ -1.34
SRP54-211ENST00000556445 ZNF214Q9UL59 606 aaPredicted RBP6.65□□□□□ -1.34
SRP54-211ENST00000556445 ABCC3O15438 1527 aa6.65□□□□□ -1.35
SRP54-211ENST00000556445 CAMSAP1Q5T5Y3 1602 aa6.65□□□□□ -1.35
SRP54-211ENST00000556445 ST20-MTHFSA0A0A6YYL1 179 aa6.64□□□□□ -1.35
SRP54-211ENST00000556445 MEIS1O00470 390 aa6.64□□□□□ -1.35
SRP54-211ENST00000556445 FKTNO75072 461 aa6.64□□□□□ -1.35
SRP54-211ENST00000556445 IBSPP21815 317 aaPredicted RBP6.64□□□□□ -1.35
SRP54-211ENST00000556445 BMP8BP34820 402 aa6.64□□□□□ -1.35
SRP54-211ENST00000556445 TMF1P82094 1093 aa6.64□□□□□ -1.35
SRP54-211ENST00000556445 CHRNEQ04844 493 aa6.64□□□□□ -1.35
SRP54-211ENST00000556445 RBL2Q08999 1139 aa6.64□□□□□ -1.35
SRP54-211ENST00000556445 C19orf47Q8N9M1 422 aaKnown RBP6.64□□□□□ -1.35
SRP54-211ENST00000556445 SYTL4Q96C24 671 aaPredicted RBP6.64□□□□□ -1.35
SRP54-211ENST00000556445 SHISA4Q96DD7 197 aa6.64□□□□□ -1.35
SRP54-211ENST00000556445 SEC16BQ96JE7 1060 aa6.64□□□□□ -1.35
SRP54-211ENST00000556445 MAP6Q96JE9 813 aa6.64□□□□□ -1.35
SRP54-211ENST00000556445 CRBNQ96SW2 442 aa6.64□□□□□ -1.35
SRP54-211ENST00000556445 GMLQ99445 158 aa6.64□□□□□ -1.35
SRP54-211ENST00000556445 CCSER2Q9H7U1 834 aa6.64□□□□□ -1.35
SRP54-211ENST00000556445 NOP58Q9Y2X3 529 aaKnown RBP6.64□□□□□ -1.35
SRP54-211ENST00000556445 NPATQ14207 1427 aa6.64□□□□□ -1.35
SRP54-211ENST00000556445 MADDQ8WXG6 1647 aa6.64□□□□□ -1.35
SRP54-211ENST00000556445 TSPOAP1O95153 1857 aa6.64□□□□□ -1.35
SRP54-211ENST00000556445 SSU72P8A0A1W2PR75 194 aa6.63□□□□□ -1.35
SRP54-211ENST00000556445 PEX14O75381 377 aa6.63□□□□□ -1.35
SRP54-211ENST00000556445 ZNF205O95201 554 aa6.63□□□□□ -1.35
SRP54-211ENST00000556445 NOS1P29475 1434 aa6.63□□□□□ -1.35
SRP54-211ENST00000556445 ANAPC15P60006 121 aa6.63□□□□□ -1.35
SRP54-211ENST00000556445 HSP90AB4PQ58FF6 505 aa6.63□□□□□ -1.35
SRP54-211ENST00000556445 CRTC3Q6UUV7 619 aa6.63□□□□□ -1.35
SRP54-211ENST00000556445 SPPL2CQ8IUH8 684 aa6.63□□□□□ -1.35
SRP54-211ENST00000556445 OR6P1Q8NGX9 317 aa6.63□□□□□ -1.35
SRP54-211ENST00000556445 HHIPL1Q96JK4 782 aa6.63□□□□□ -1.35
SRP54-211ENST00000556445 FAM84AQ96KN4 292 aa6.63□□□□□ -1.35
SRP54-211ENST00000556445 SCAF11Q99590 1463 aaKnown RBP6.63□□□□□ -1.35
SRP54-211ENST00000556445 NSUN3Q9H649 340 aaKnown RBP6.63□□□□□ -1.35
SRP54-211ENST00000556445 GP6Q9HCN6 339 aa6.63□□□□□ -1.35
SRP54-211ENST00000556445 INPP5FQ9Y2H2 1132 aa6.63□□□□□ -1.35
SRP54-211ENST00000556445 KIF13AQ9H1H9 1805 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 ADGRB3O60242 1522 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 YEATS2Q9ULM3 1422 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 CCDC194A0A1B0GVG4 234 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 A0A1W2PQH9 124 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 PSPNO60542 156 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 USP2O75604 605 aaPredicted RBP6.62□□□□□ -1.35
SRP54-211ENST00000556445 TP53P04637 393 aaPredicted RBP6.62□□□□□ -1.35
SRP54-211ENST00000556445 VAV1P15498 845 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 KIR2DL1P43626 348 aaPredicted RBP6.62□□□□□ -1.35
SRP54-211ENST00000556445 KIR2DL2P43627 348 aaPredicted RBP6.62□□□□□ -1.35
SRP54-211ENST00000556445 CEBPAP49715 358 aaPredicted RBP6.62□□□□□ -1.35
SRP54-211ENST00000556445 ZNF445P59923 1031 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 ZNF124Q15973 351 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 SMC5Q8IY18 1101 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 DIRC2Q96SL1 478 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 ZSWIM4Q9H7M6 989 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 PRKRIP1Q9H875 184 aaPredicted RBP6.62□□□□□ -1.35
SRP54-211ENST00000556445 KCNK12Q9HB15 430 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 CAPN10Q9HC96 672 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 FAM86C1Q9NVL1 165 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 CHPF2Q9P2E5 772 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 ZMYM5Q9UJ78 669 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 FAN1Q9Y2M0 1017 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 YBX2Q9Y2T7 364 aaKnown RBP6.62□□□□□ -1.35
SRP54-211ENST00000556445 ZNF451Q9Y4E5 1061 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 IFT172Q9UG01 1749 aa6.62□□□□□ -1.35
SRP54-211ENST00000556445 NRXN1Q9ULB1 1477 aa6.61□□□□□ -1.35
SRP54-211ENST00000556445 CBFA2T2O43439 604 aa6.61□□□□□ -1.35
SRP54-211ENST00000556445 GSNP06396 782 aa6.61□□□□□ -1.35
SRP54-211ENST00000556445 CD247P20963 164 aa6.61□□□□□ -1.35
SRP54-211ENST00000556445 SNX17Q15036 470 aa6.61□□□□□ -1.35
SRP54-211ENST00000556445 RALBP1Q15311 655 aa6.61□□□□□ -1.35
SRP54-211ENST00000556445 RTP2Q5QGT7 225 aa6.61□□□□□ -1.35
SRP54-211ENST00000556445 NLRX1Q86UT6 975 aa6.61□□□□□ -1.35
SRP54-211ENST00000556445 JAZF1Q86VZ6 243 aa6.61□□□□□ -1.35
SRP54-211ENST00000556445 KSR1Q8IVT5 923 aa6.61□□□□□ -1.35
SRP54-211ENST00000556445 FAM169BQ8N8A8 192 aa6.61□□□□□ -1.35
SRP54-211ENST00000556445 PMFBP1Q8TBY8 1022 aa6.61□□□□□ -1.35
SRP54-211ENST00000556445 FCRL2Q96LA5 508 aaPredicted RBP6.61□□□□□ -1.35
SRP54-211ENST00000556445 GPR160Q9UJ42 338 aa6.61□□□□□ -1.35
SRP54-211ENST00000556445 FHOD1Q9Y613 1164 aa6.61□□□□□ -1.35
SRP54-211ENST00000556445 IQGAP1P46940 1657 aa6.61□□□□□ -1.35
SRP54-211ENST00000556445 PIK3C2BO00750 1634 aa6.61□□□□□ -1.35
SRP54-211ENST00000556445 SETBP1Q9Y6X0 1596 aa6.61□□□□□ -1.35
SRP54-211ENST00000556445 H0Y8X5 98 aa6.6□□□□□ -1.35
SRP54-211ENST00000556445 NRDCO43847 1150 aa6.6□□□□□ -1.35
SRP54-211ENST00000556445 GALK1P51570 392 aa6.6□□□□□ -1.35
SRP54-211ENST00000556445 HSP90AB2PQ58FF8 381 aa6.6□□□□□ -1.35
SRP54-211ENST00000556445 IRF2BP1Q8IU81 584 aa6.6□□□□□ -1.35
SRP54-211ENST00000556445 BHLHE22Q8NFJ8 381 aaPredicted RBP6.6□□□□□ -1.35
SRP54-211ENST00000556445 ZCRB1Q8TBF4 217 aaKnown RBP6.6□□□□□ -1.35
SRP54-211ENST00000556445 BRF1Q92994 677 aa6.6□□□□□ -1.35
SRP54-211ENST00000556445 INTS4Q96HW7 963 aaKnown RBP6.6□□□□□ -1.35
SRP54-211ENST00000556445 DSCC1Q9BVC3 393 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms