RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 ZMYND12Q9H0C1 365 aa9.47□□□□□ -0.89
ATXN3-235ENST00000556082 CBX8Q9HC52 389 aa9.47□□□□□ -0.89
ATXN3-235ENST00000556082 FAM13BQ9NYF5 915 aa9.47□□□□□ -0.89
ATXN3-235ENST00000556082 CCDC39Q9UFE4 941 aa9.47□□□□□ -0.89
ATXN3-235ENST00000556082 USP25Q9UHP3 1055 aa9.47□□□□□ -0.89
ATXN3-235ENST00000556082 TUBE1Q9UJT0 475 aa9.47□□□□□ -0.89
ATXN3-235ENST00000556082 KCNH3Q9ULD8 1083 aa9.47□□□□□ -0.89
ATXN3-235ENST00000556082 SYNPO2Q9UMS6 1093 aa9.47□□□□□ -0.89
ATXN3-235ENST00000556082 FOCADQ5VW36 1801 aa9.47□□□□□ -0.89
ATXN3-235ENST00000556082 hCG_1642624A0A1W2PR95 340 aa9.46□□□□□ -0.9
ATXN3-235ENST00000556082 ESPNB1AK53 854 aa9.46□□□□□ -0.9
ATXN3-235ENST00000556082 STXBP3O00186 592 aa9.46□□□□□ -0.9
ATXN3-235ENST00000556082 ADCY5O95622 1261 aa9.46□□□□□ -0.9
ATXN3-235ENST00000556082 PDHBP11177 359 aa9.46□□□□□ -0.9
ATXN3-235ENST00000556082 VEGFAP15692 232 aaPredicted RBP9.46□□□□□ -0.9
ATXN3-235ENST00000556082 LORP23490 312 aaPredicted RBP9.46□□□□□ -0.9
ATXN3-235ENST00000556082 RFC5P40937 340 aa9.46□□□□□ -0.9
ATXN3-235ENST00000556082 ATP2C1P98194 919 aaPredicted RBP9.46□□□□□ -0.9
ATXN3-235ENST00000556082 IQCB1Q15051 598 aa9.46□□□□□ -0.9
ATXN3-235ENST00000556082 EARS2Q5JPH6 523 aaKnown RBP9.46□□□□□ -0.9
ATXN3-235ENST00000556082 TTC38Q5R3I4 469 aa9.46□□□□□ -0.9
ATXN3-235ENST00000556082 ARL6IP4Q66PJ3 421 aaKnown RBP9.46□□□□□ -0.9
ATXN3-235ENST00000556082 KRBA2Q6ZNG9 492 aa9.46□□□□□ -0.9
ATXN3-235ENST00000556082 MTMR14Q8NCE2 650 aa9.46□□□□□ -0.9
ATXN3-235ENST00000556082 ADAM32Q8TC27 787 aa9.46□□□□□ -0.9
ATXN3-235ENST00000556082 PCMTD1Q96MG8 357 aaPredicted RBP9.46□□□□□ -0.9
ATXN3-235ENST00000556082 PYM1Q9BRP8 204 aaKnown RBP9.46□□□□□ -0.9
ATXN3-235ENST00000556082 KANSL2Q9H9L4 492 aa9.46□□□□□ -0.9
ATXN3-235ENST00000556082 NYAP2Q9P242 653 aa9.46□□□□□ -0.9
ATXN3-235ENST00000556082 HOOK1Q9UJC3 728 aaKnown RBP9.46□□□□□ -0.9
ATXN3-235ENST00000556082 DNMT3LQ9UJW3 386 aa9.46□□□□□ -0.9
ATXN3-235ENST00000556082 ZNRF3Q9ULT6 936 aa9.46□□□□□ -0.9
ATXN3-235ENST00000556082 CDK5RAP2Q96SN8 1893 aa9.46□□□□□ -0.9
ATXN3-235ENST00000556082 ECM29Q5VYK3 1845 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 USP17L5A8MUK1 530 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 GNA11P29992 359 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 NLRP12P59046 1061 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 ORC2Q13416 577 aaPredicted RBP9.45□□□□□ -0.9
ATXN3-235ENST00000556082 CFAP100Q494V2 611 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 GPATCH4Q5T3I0 446 aaKnown RBP9.45□□□□□ -0.9
ATXN3-235ENST00000556082 NT5DC1Q5TFE4 455 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 WWC2Q6AWC2 1192 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 USP17L2Q6R6M4 530 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 SARM1Q6SZW1 724 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 ZSCAN30Q86W11 494 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 ZFPM1Q8IX07 1006 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 CEP57L1Q8IYX8 460 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 C4orf32Q8N8J7 132 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 AGBL3Q8NEM8 1001 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 CLIC6Q96NY7 704 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 OCSTAMPQ9BR26 566 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 C6orf50Q9HD87 102 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 PIM2Q9P1W9 311 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 HDAC9Q9UKV0 1011 aa9.45□□□□□ -0.9
ATXN3-235ENST00000556082 MYH1P12882 1939 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 DDTLA6NHG4 134 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-235ENST00000556082 LAD1O00515 517 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 TPM3P06753 285 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 POLD1P28340 1107 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 RBM5P52756 815 aaKnown RBP eCLIP9.44□□□□□ -0.9
ATXN3-235ENST00000556082 ZNF543Q08ER8 600 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 LONRF3Q496Y0 759 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 CT47A1Q5JQC4 288 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-235ENST00000556082 TMEM179Q6ZVK1 233 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 KRT25Q7Z3Z0 450 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-235ENST00000556082 LUZP1Q86V48 1076 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 TEX2Q8IWB9 1127 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 LARGE2Q8N3Y3 721 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 MTMR8Q96EF0 704 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 CCDC34Q96HJ3 373 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 PRMT6Q96LA8 375 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-235ENST00000556082 MTFR1LQ9H019 292 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 CSRNP2Q9H175 543 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 DNAJC25Q9H1X3 360 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 DNAJC18Q9H819 358 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 CLIP2Q9UDT6 1046 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 SEC63Q9UGP8 760 aaKnown RBP9.44□□□□□ -0.9
ATXN3-235ENST00000556082 HERC5Q9UII4 1024 aaKnown RBP9.44□□□□□ -0.9
ATXN3-235ENST00000556082 PCDHA6Q9UN73 950 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 PCDHA8Q9Y5H6 950 aa9.44□□□□□ -0.9
ATXN3-235ENST00000556082 ZNF646O15015 1829 aaPredicted RBP9.43□□□□□ -0.9
ATXN3-235ENST00000556082 PNMA6FA0A0J9YX94 578 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 CCDC194A0A1B0GVG4 234 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 GOLGA6L19H0YKK7 550 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 MYO1BO43795 1136 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 GOLGA8HP0CJ92 632 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 CDC25BP30305 580 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 PRPHP41219 470 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 SARSP49591 514 aaKnown RBP9.43□□□□□ -0.9
ATXN3-235ENST00000556082 ZRSR1Q15695 479 aaKnown RBP9.43□□□□□ -0.9
ATXN3-235ENST00000556082 ZNF174Q15697 407 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 CERKLQ49MI3 558 aaPredicted RBP9.43□□□□□ -0.9
ATXN3-235ENST00000556082 DALRD3Q5D0E6 543 aaKnown RBP9.43□□□□□ -0.9
ATXN3-235ENST00000556082 INTS6LQ5JSJ4 861 aaKnown RBP9.43□□□□□ -0.9
ATXN3-235ENST00000556082 PIK3AP1Q6ZUJ8 805 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 C11orf57Q6ZUT1 292 aaPredicted RBP9.43□□□□□ -0.9
ATXN3-235ENST00000556082 HEATR3Q7Z4Q2 680 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 NIM1KQ8IY84 436 aa9.43□□□□□ -0.9
ATXN3-235ENST00000556082 OGFOD1Q8N543 542 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms