RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 FLCNQ8NFG4 579 aa7.6□□□□□ -1.19
CKS1BP1-201ENST00000555221 HHIPL1Q96JK4 782 aa7.6□□□□□ -1.19
CKS1BP1-201ENST00000555221 G6PC3Q9BUM1 346 aa7.6□□□□□ -1.19
CKS1BP1-201ENST00000555221 CCDC39Q9UFE4 941 aa7.6□□□□□ -1.19
CKS1BP1-201ENST00000555221 TMEM59LQ9UK28 342 aa7.6□□□□□ -1.19
CKS1BP1-201ENST00000555221 KIAA1324LA8MWY0 1029 aaPredicted RBP7.59□□□□□ -1.19
CKS1BP1-201ENST00000555221 MSCO60682 206 aa7.59□□□□□ -1.19
CKS1BP1-201ENST00000555221 ZGLP1P0C6A0 271 aa7.59□□□□□ -1.19
CKS1BP1-201ENST00000555221 JMJD7P0C870 316 aa7.59□□□□□ -1.19
CKS1BP1-201ENST00000555221 CHRNEQ04844 493 aa7.59□□□□□ -1.19
CKS1BP1-201ENST00000555221 LSAMPQ13449 338 aa7.59□□□□□ -1.19
CKS1BP1-201ENST00000555221 CFAP100Q494V2 611 aa7.59□□□□□ -1.19
CKS1BP1-201ENST00000555221 ZCCHC8Q6NZY4 707 aaKnown RBP7.59□□□□□ -1.19
CKS1BP1-201ENST00000555221 ZNF574Q6ZN55 896 aaPredicted RBP7.59□□□□□ -1.19
CKS1BP1-201ENST00000555221 ANKLE2Q86XL3 938 aa7.59□□□□□ -1.19
CKS1BP1-201ENST00000555221 SPPL2CQ8IUH8 684 aa7.59□□□□□ -1.19
CKS1BP1-201ENST00000555221 PANK1Q8TE04 598 aa7.59□□□□□ -1.19
CKS1BP1-201ENST00000555221 CHAMP1Q96JM3 812 aa7.59□□□□□ -1.19
CKS1BP1-201ENST00000555221 ADAMTS10Q9H324 1103 aa7.59□□□□□ -1.19
CKS1BP1-201ENST00000555221 FAM47E-STBD1D6RA91 191 aa7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 GSTA4O15217 222 aa7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 MED26O95402 600 aa7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 CPEP16870 476 aa7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 GRK2P25098 689 aa7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 SSTR4P31391 388 aa7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 GRK3P35626 688 aa7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 CORO7P57737 925 aa7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 SLC14A2Q15849 920 aa7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 FAM47CQ5HY64 1035 aa7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 RALGPS1Q5JS13 557 aa7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 SLC23A3Q6PIS1 610 aa7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 DDX46Q7L014 1031 aaKnown RBP7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 SLCO6A1Q86UG4 719 aa7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 WFDC3Q8IUB2 231 aa7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 OXR1Q8N573 874 aa7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 NLGN2Q8NFZ4 835 aa7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 PCDH19Q8TAB3 1148 aa7.58□□□□□ -1.2
CKS1BP1-201ENST00000555221 WTIPA6NIX2 430 aaPredicted RBP7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 H7BY64 318 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 WNT9AO14904 365 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 KPNA6O60684 536 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 SOD2P04179 222 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 FUT4P22083 530 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 BCL6P41182 706 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 CEBPAP49715 358 aaPredicted RBP7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 RTP1P59025 263 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 NFKB2Q00653 900 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 CDCA2Q69YH5 1023 aaPredicted RBP7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 WWC2Q6AWC2 1192 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 CEP128Q6ZU80 1094 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 PDZD8Q8NEN9 1154 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 LEO1Q8WVC0 666 aaPredicted RBP7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 TMEM169Q96HH4 297 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 WNK4Q96J92 1243 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 JMJD8Q96S16 334 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 SAMD15Q9P1V8 674 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 ADGRE2Q9UHX3 823 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 MCM8Q9UJA3 840 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 TAF6LQ9Y6J9 622 aa7.57□□□□□ -1.2
CKS1BP1-201ENST00000555221 A0A1W2PQ27 194 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 A0A1W2PQ64 194 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 A0A1W2PQC6 194 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 A0A1W2PQD8 194 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 FITM1A5D6W6 292 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 FAM83GA6ND36 823 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 USP2O75604 605 aaPredicted RBP7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 ITGB7P26010 798 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 PIK3R6Q5UE93 754 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 GALNT18Q6P9A2 607 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 KIF18BQ86Y91 864 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 UBR7Q8N806 425 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 AGBL5Q8NDL9 886 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 PI4K2BQ8TCG2 481 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 DPF3Q92784 378 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 FBXW5Q969U6 566 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 ORAI3Q9BRQ5 295 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 CELF4Q9BZC1 486 aaKnown RBP7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 PAK6Q9NQU5 681 aaPredicted RBP7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 CLDND1Q9NY35 253 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 ATP8A1Q9Y2Q0 1164 aa7.56□□□□□ -1.2
CKS1BP1-201ENST00000555221 SRGAP2CP0DJJ0 459 aa7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 KCNA6P17658 529 aa7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 HK2P52789 917 aa7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 ST5P78524 1137 aa7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 DHCR24Q15392 516 aa7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 HSF5Q4G112 596 aaPredicted RBP7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 PKN3Q6P5Z2 889 aa7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 CEP68Q76N32 757 aa7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 Q8N1Y9 231 aa7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 AFAP1L2Q8N4X5 818 aa7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 IGSF22Q8N9C0 903 aa7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 ASIC4Q96FT7 647 aa7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 TRMT2BQ96GJ1 504 aaKnown RBP7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 MTFR1LQ9H019 292 aa7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 IPPKQ9H8X2 491 aa7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 CABP5Q9NP86 173 aa7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 BTG4Q9NY30 223 aa7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 GULP1Q9UBP9 304 aa7.55□□□□□ -1.2
CKS1BP1-201ENST00000555221 EBF1Q9UH73 591 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms