RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 CNOT8Q9UFF9 292 aaKnown RBP9.82□□□□□ -0.84
SYNE2-217ENST00000555022 USP17L12C9JPN9 530 aa9.82□□□□□ -0.84
SYNE2-217ENST00000555022 USP17L21D6R901 530 aa9.82□□□□□ -0.84
SYNE2-217ENST00000555022 MDH1P40925 334 aaKnown RBP9.82□□□□□ -0.84
SYNE2-217ENST00000555022 LIFRP42702 1097 aa9.82□□□□□ -0.84
SYNE2-217ENST00000555022 GSCP56915 257 aaPredicted RBP9.82□□□□□ -0.84
SYNE2-217ENST00000555022 MICAL1Q8TDZ2 1067 aa9.82□□□□□ -0.84
SYNE2-217ENST00000555022 OSBPL7Q9BZF2 842 aa9.82□□□□□ -0.84
SYNE2-217ENST00000555022 SH2D4AQ9H788 454 aa9.82□□□□□ -0.84
SYNE2-217ENST00000555022 ADAMTS1Q9UHI8 967 aa9.82□□□□□ -0.84
SYNE2-217ENST00000555022 NWD2Q9ULI1 1742 aa9.82□□□□□ -0.84
SYNE2-217ENST00000555022 ITIH6Q6UXX5 1313 aa9.82□□□□□ -0.84
SYNE2-217ENST00000555022 TARSL2A2RTX5 802 aaKnown RBP9.81□□□□□ -0.84
SYNE2-217ENST00000555022 POLR2FP61218 127 aaKnown RBP9.81□□□□□ -0.84
SYNE2-217ENST00000555022 TRIM14Q14142 442 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 TRIM68Q6AZZ1 485 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 DTHD1Q6ZMT9 781 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 MICALCLQ6ZW33 695 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 FAM228AQ86W67 206 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 IFT20Q8IY31 132 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 ZNF579Q8NAF0 562 aaKnown RBP9.81□□□□□ -0.84
SYNE2-217ENST00000555022 TRIM58Q8NG06 486 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 TBC1D5Q92609 795 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 DCAF5Q96JK2 942 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 NEUROG2Q9H2A3 272 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 GPR108Q9NPR9 543 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 THRAP3Q9Y2W1 955 aaKnown RBP9.81□□□□□ -0.84
SYNE2-217ENST00000555022 TBX22Q9Y458 520 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 EME2A4GXA9 379 aaPredicted RBP9.81□□□□□ -0.84
SYNE2-217ENST00000555022 A8MUI8 341 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 H7C1D1 291 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 TUBBP07437 444 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 ITGA4P13612 1032 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 TXKP42681 527 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 DNM2P50570 870 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 ZBED6P86452 979 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 LRRC14Q15048 493 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 OTUD6AQ7L8S5 288 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 ESR2Q92731 530 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 FERMT2Q96AC1 680 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 TRIM51Q9BSJ1 452 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 PHF20Q9BVI0 1012 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 DNAJC17Q9NVM6 304 aaKnown RBP9.81□□□□□ -0.84
SYNE2-217ENST00000555022 CHORDC1Q9UHD1 332 aaPredicted RBP9.81□□□□□ -0.84
SYNE2-217ENST00000555022 ATP8A1Q9Y2Q0 1164 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 DAPK3O43293 454 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 PDE8BO95263 885 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 VIMP08670 466 aaKnown RBP9.81□□□□□ -0.84
SYNE2-217ENST00000555022 EZRP15311 586 aaKnown RBP9.81□□□□□ -0.84
SYNE2-217ENST00000555022 KLRC1P26715 233 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 ERFP50548 548 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 PAK2Q13177 524 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 ZKSCAN8Q15776 578 aaPredicted RBP9.81□□□□□ -0.84
SYNE2-217ENST00000555022 NAALADL2Q58DX5 795 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 UBAP2Q5T6F2 1119 aaKnown RBP9.81□□□□□ -0.84
SYNE2-217ENST00000555022 ARMC3Q5W041 872 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 FAM133AQ8N9E0 248 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 ATP6V1G3Q96LB4 118 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 ZSCAN10Q96SZ4 725 aaPredicted RBP9.81□□□□□ -0.84
SYNE2-217ENST00000555022 VCPKMTQ9H867 229 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 FBXL5Q9UKA1 691 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 MST1RQ04912 1400 aa9.81□□□□□ -0.84
SYNE2-217ENST00000555022 STK36Q9NRP7 1315 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 MEGF6O75095 1541 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 TCRBV5S4A2TA0A5A2 114 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 GCOM1H8Y6P7 765 aaPredicted RBP9.8□□□□□ -0.84
SYNE2-217ENST00000555022 MYZAPP0CAP1 466 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 CCNHP51946 323 aaPredicted RBP9.8□□□□□ -0.84
SYNE2-217ENST00000555022 ATP2C1P98194 919 aaPredicted RBP9.8□□□□□ -0.84
SYNE2-217ENST00000555022 KIAA0753Q2KHM9 967 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 BICDL1Q6ZP65 573 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 HVCN1Q96D96 273 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 YIPF3Q9GZM5 350 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 DISC1Q9NRI5 854 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 SEPT11Q9NVA2 429 aaKnown RBP9.8□□□□□ -0.84
SYNE2-217ENST00000555022 AMACRQ9UHK6 382 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 PNMA2Q9UL42 364 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 STX8Q9UNK0 236 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 LEMD3Q9Y2U8 911 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 PLEKHG1Q9ULL1 1385 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 TSPY2A6NKD2 308 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 SRGNP10124 158 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 ERVK-9P63128 1117 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 UBE3CQ15386 1083 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 CFAP221Q4G0U5 840 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 TTI2Q6NXR4 508 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 CCDC25Q86WR0 208 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 ZNF507Q8TCN5 953 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 PIK3R5Q8WYR1 880 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 P2RX5Q93086 422 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 MIEF2Q96C03 454 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 NOX5Q96PH1 765 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 LSM14BQ9BX40 385 aaKnown RBP9.8□□□□□ -0.84
SYNE2-217ENST00000555022 ZCWPW1Q9H0M4 648 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 CNNM2Q9H8M5 875 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 RMND1Q9NWS8 449 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 MCM8Q9UJA3 840 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 NALCNQ8IZF0 1738 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 SLIT1O75093 1534 aa9.8□□□□□ -0.84
SYNE2-217ENST00000555022 CCNT1O60563 726 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms