RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	R3HCC1	Q9Y3T6	440 aa	Known RBP	7.75	□□□□□ -1.17
PSMC6-208	ENST00000554956	PZP	P20742	1482 aa		7.75	□□□□□ -1.17
PSMC6-208	ENST00000554956	IQSEC2	Q5JU85	1478 aa		7.75	□□□□□ -1.17
PSMC6-208	ENST00000554956	LRRC9	Q6ZRR7	1453 aa		7.75	□□□□□ -1.17
PSMC6-208	ENST00000554956	DNMT1	P26358	1616 aa	Known RBP	7.74	□□□□□ -1.17
PSMC6-208	ENST00000554956	TBX1	O43435	398 aa		7.74	□□□□□ -1.17
PSMC6-208	ENST00000554956	NRDC	O43847	1150 aa		7.74	□□□□□ -1.17
PSMC6-208	ENST00000554956	SUSD5	O60279	629 aa		7.74	□□□□□ -1.17
PSMC6-208	ENST00000554956	KCNH1	O95259	989 aa		7.74	□□□□□ -1.17
PSMC6-208	ENST00000554956	TSPY4	P0CV99	314 aa		7.74	□□□□□ -1.17
PSMC6-208	ENST00000554956	TSPY10	P0CW01	314 aa		7.74	□□□□□ -1.17
PSMC6-208	ENST00000554956	ENDOU	P21128	410 aa	Known RBP	7.74	□□□□□ -1.17
PSMC6-208	ENST00000554956	HSPA1L	P34931	641 aa		7.74	□□□□□ -1.17
PSMC6-208	ENST00000554956	ZNF648	Q5T619	568 aa	Predicted RBP	7.74	□□□□□ -1.17
PSMC6-208	ENST00000554956	JMJD8	Q96S16	334 aa		7.74	□□□□□ -1.17
PSMC6-208	ENST00000554956	NSUN3	Q9H649	340 aa	Known RBP	7.74	□□□□□ -1.17
PSMC6-208	ENST00000554956	YBX2	Q9Y2T7	364 aa	Known RBP	7.74	□□□□□ -1.17
PSMC6-208	ENST00000554956	EMC9	Q9Y3B6	208 aa		7.74	□□□□□ -1.17
PSMC6-208	ENST00000554956	VPS8	Q8N3P4	1428 aa		7.74	□□□□□ -1.17
PSMC6-208	ENST00000554956	NEURL4	Q96JN8	1562 aa		7.73	□□□□□ -1.17
PSMC6-208	ENST00000554956	AURKA	O14965	403 aa		7.73	□□□□□ -1.17
PSMC6-208	ENST00000554956	NOP2	P46087	812 aa	Known RBP	7.73	□□□□□ -1.17
PSMC6-208	ENST00000554956	AMPD2	Q01433	879 aa		7.73	□□□□□ -1.17
PSMC6-208	ENST00000554956	ANKLE2	Q86XL3	938 aa		7.73	□□□□□ -1.17
PSMC6-208	ENST00000554956	INTS4	Q96HW7	963 aa	Known RBP	7.73	□□□□□ -1.17
PSMC6-208	ENST00000554956	TAF6L	Q9Y6J9	622 aa		7.73	□□□□□ -1.17
PSMC6-208	ENST00000554956	ZNF142	P52746	1687 aa	Predicted RBP	7.73	□□□□□ -1.17
PSMC6-208	ENST00000554956	ADGB	Q8N7X0	1667 aa		7.73	□□□□□ -1.17
PSMC6-208	ENST00000554956	KDM5D	Q9BY66	1539 aa		7.73	□□□□□ -1.17
PSMC6-208	ENST00000554956	NAT2	P11245	290 aa		7.72	□□□□□ -1.17
PSMC6-208	ENST00000554956	SDHB	P21912	280 aa		7.72	□□□□□ -1.17
PSMC6-208	ENST00000554956	ZNF143	P52747	638 aa	Predicted RBP	7.72	□□□□□ -1.17
PSMC6-208	ENST00000554956	GRB10	Q13322	594 aa		7.72	□□□□□ -1.17
PSMC6-208	ENST00000554956	DDR2	Q16832	855 aa		7.72	□□□□□ -1.17
PSMC6-208	ENST00000554956	SV2C	Q496J9	727 aa		7.72	□□□□□ -1.17
PSMC6-208	ENST00000554956	THEMIS	Q8N1K5	641 aa	Predicted RBP	7.72	□□□□□ -1.17
PSMC6-208	ENST00000554956	BVES	Q8NE79	360 aa		7.72	□□□□□ -1.17
PSMC6-208	ENST00000554956	PTCHD1	Q96NR3	888 aa		7.72	□□□□□ -1.17
PSMC6-208	ENST00000554956	CWC22	Q9HCG8	908 aa	Known RBP	7.72	□□□□□ -1.17
PSMC6-208	ENST00000554956	IMPACT	Q9P2X3	320 aa		7.72	□□□□□ -1.17
PSMC6-208	ENST00000554956	SHANK2	Q9UPX8	1470 aa		7.71	□□□□□ -1.18
PSMC6-208	ENST00000554956	STK10	O94804	968 aa	Known RBP	7.71	□□□□□ -1.18
PSMC6-208	ENST00000554956	ATP2B1	P20020	1258 aa		7.71	□□□□□ -1.18
PSMC6-208	ENST00000554956	SNX17	Q15036	470 aa		7.71	□□□□□ -1.18
PSMC6-208	ENST00000554956	RCSD1	Q6JBY9	416 aa		7.71	□□□□□ -1.18
PSMC6-208	ENST00000554956	ZNF227	Q86WZ6	799 aa		7.71	□□□□□ -1.18
PSMC6-208	ENST00000554956	TRIM59	Q8IWR1	403 aa		7.71	□□□□□ -1.18
PSMC6-208	ENST00000554956	POU5F2	Q8N7G0	328 aa		7.71	□□□□□ -1.18
PSMC6-208	ENST00000554956	MRGPRX3	Q96LB0	322 aa		7.71	□□□□□ -1.18
PSMC6-208	ENST00000554956	FAM53C	Q9NYF3	392 aa		7.71	□□□□□ -1.18
PSMC6-208	ENST00000554956	BACE2	Q9Y5Z0	518 aa		7.71	□□□□□ -1.18
PSMC6-208	ENST00000554956	ABCC3	O15438	1527 aa		7.71	□□□□□ -1.18
PSMC6-208	ENST00000554956	ARHGEF5	Q12774	1597 aa		7.71	□□□□□ -1.18
PSMC6-208	ENST00000554956	NPHP4	O75161	1426 aa	Predicted RBP	7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	NOP56	O00567	594 aa	Known RBP	7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	ITGAV	P06756	1048 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	MSL3P1	P0C860	447 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	PRKCA	P17252	672 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	PDE6B	P35913	854 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	TXK	P42681	527 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	MESP2	Q0VG99	397 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	RAB33A	Q14088	237 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	SLC10A6	Q3KNW5	377 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	GTF2IRD2B	Q6EKJ0	949 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	GALNT18	Q6P9A2	607 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	CYP2R1	Q6VVX0	501 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	GTF2IRD2	Q86UP8	949 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	NUP43	Q8NFH3	380 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	BTN2A2	Q8WVV5	523 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	SLC6A17	Q9H1V8	727 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	RRP7BP	Q9NSQ0	103 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	SPATA31D1	Q6ZQQ2	1576 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	VWDE	Q8N2E2	1590 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	ALK	Q9UM73	1620 aa		7.7	□□□□□ -1.18
PSMC6-208	ENST00000554956	ABCC5	O15440	1437 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	MYOM3	Q5VTT5	1437 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	MED14	O60244	1454 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	ERVK-7	P63135	1459 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	NLRP1	Q9C000	1473 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	UGGT1	Q9NYU2	1555 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956		A0A1W2PQ45	241 aa	Predicted RBP	7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956		A0A1W2PQY0	241 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	C2orf71	A6NGG8	1288 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	WTIP	A6NIX2	430 aa	Predicted RBP	7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	GTF2F1	P35269	517 aa	Known RBP eCLIP	7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	SEPHS1	P49903	392 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	SCRN1	Q12765	414 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	ADGRF1	Q5T601	910 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	HLA-DQA1	Q5Y7H0	255 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	EEF1DP3	Q658K8	133 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	JAML	Q86YT9	394 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	KRTAP9-2	Q9BYQ4	174 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	TRIM55	Q9BYV6	548 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	EPB41L4B	Q9H329	900 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	DCP1A	Q9NPI6	582 aa	Predicted RBP	7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	LRP2BP	Q9P2M1	347 aa		7.69	□□□□□ -1.18
PSMC6-208	ENST00000554956	MROH1	Q8NDA8	1641 aa		7.68	□□□□□ -1.18
PSMC6-208	ENST00000554956	FARP2	O94887	1054 aa	Predicted RBP	7.68	□□□□□ -1.18
PSMC6-208	ENST00000554956	CYP4F3	Q08477	520 aa		7.68	□□□□□ -1.18
PSMC6-208	ENST00000554956	LAPTM5	Q13571	262 aa		7.68	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms