RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 TRIM59Q8IWR1 403 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 ZBTB38Q8NAP3 1195 aaPredicted RBP6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 ENOX1Q8TC92 643 aaKnown RBP6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 BTN2A2Q8WVV5 523 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 MRGPRX3Q96LB0 322 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 CDC6Q99741 560 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 HDAC8Q9BY41 377 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 ARHGEF4Q9NR80 690 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 FANCLQ9NW38 375 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 EID1Q9Y6B2 187 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 PTCH2Q9Y6C5 1203 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 SYNMO15061 1565 aa6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 MED1Q15648 1581 aaPredicted RBP6.86□□□□□ -1.31
MTHFD1-206ENST00000554353 ARHGAP23Q9P227 1491 aa6.85□□□□□ -1.31
MTHFD1-206ENST00000554353 KDM5AP29375 1690 aaKnown RBP6.85□□□□□ -1.31
MTHFD1-206ENST00000554353 TMEM265A0A087WTH1 108 aa6.85□□□□□ -1.31
MTHFD1-206ENST00000554353 TRAV20A0A0B4J274 112 aa6.85□□□□□ -1.31
MTHFD1-206ENST00000554353 SRFP11831 508 aa6.85□□□□□ -1.31
MTHFD1-206ENST00000554353 TPP2P29144 1249 aaPredicted RBP6.85□□□□□ -1.31
MTHFD1-206ENST00000554353 CTSKP43235 329 aa6.85□□□□□ -1.31
MTHFD1-206ENST00000554353 GTF2IRD2BQ6EKJ0 949 aa6.85□□□□□ -1.31
MTHFD1-206ENST00000554353 GTF2IRD2Q86UP8 949 aa6.85□□□□□ -1.31
MTHFD1-206ENST00000554353 DAGLBQ8NCG7 672 aa6.85□□□□□ -1.31
MTHFD1-206ENST00000554353 TCTN2Q96GX1 697 aa6.85□□□□□ -1.31
MTHFD1-206ENST00000554353 IPO9Q96P70 1041 aaKnown RBP6.85□□□□□ -1.31
MTHFD1-206ENST00000554353 AARSD1Q9BTE6 412 aaKnown RBP6.85□□□□□ -1.31
MTHFD1-206ENST00000554353 GPR55Q9Y2T6 319 aaPredicted RBP6.85□□□□□ -1.31
MTHFD1-206ENST00000554353 TONSLQ96HA7 1378 aa6.84□□□□□ -1.31
MTHFD1-206ENST00000554353 ANKRD30AQ9BXX3 1397 aa6.84□□□□□ -1.31
MTHFD1-206ENST00000554353 SSU72P8A0A1W2PR75 194 aa6.84□□□□□ -1.31
MTHFD1-206ENST00000554353 CDC45O75419 566 aa6.84□□□□□ -1.31
MTHFD1-206ENST00000554353 GSNP06396 782 aa6.84□□□□□ -1.31
MTHFD1-206ENST00000554353 CD3EP07766 207 aa6.84□□□□□ -1.31
MTHFD1-206ENST00000554353 GRIA2P42262 883 aa6.84□□□□□ -1.31
MTHFD1-206ENST00000554353 AMPD2Q01433 879 aa6.84□□□□□ -1.31
MTHFD1-206ENST00000554353 POU4F1Q01851 419 aa6.84□□□□□ -1.31
MTHFD1-206ENST00000554353 IDI1Q13907 227 aa6.84□□□□□ -1.31
MTHFD1-206ENST00000554353 YOD1Q5VVQ6 348 aaPredicted RBP6.84□□□□□ -1.31
MTHFD1-206ENST00000554353 TSPYL5Q86VY4 417 aaPredicted RBP6.84□□□□□ -1.31
MTHFD1-206ENST00000554353 HOMER1Q86YM7 354 aa6.84□□□□□ -1.31
MTHFD1-206ENST00000554353 ZNF655Q8N720 491 aaPredicted RBP6.84□□□□□ -1.31
MTHFD1-206ENST00000554353 ZSWIM2Q8NEG5 633 aa6.84□□□□□ -1.31
MTHFD1-206ENST00000554353 APPBP2Q92624 585 aa6.84□□□□□ -1.31
MTHFD1-206ENST00000554353 TMEM2Q9UHN6 1383 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 EFCAB6Q5THR3 1501 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 LMTK2Q8IWU2 1503 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 PRODHO43272 600 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 SYPP08247 313 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 L1CAMP32004 1257 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 GRIK1P39086 918 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 KCNJ6P48051 423 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 DDX10Q13206 875 aaKnown RBP6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 GRB10Q13322 594 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 AOC3Q16853 763 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 FAM209AQ5JX71 171 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 FOXB2Q5VYV0 432 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 THAP5Q7Z6K1 395 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 CREG2Q8IUH2 290 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 JMYQ8N9B5 988 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 HRASLS5Q96KN8 279 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 SLC26A8Q96RN1 970 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 MPHOSPH9Q99550 1183 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 IER2Q9BTL4 223 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 ATP13A1Q9HD20 1204 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 SEMA3GQ9NS98 782 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 TMEM260Q9NX78 707 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 DUSP13Q9UII6 198 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 SNX11Q9Y5W9 270 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 ADGRL2O95490 1459 aa6.83□□□□□ -1.32
MTHFD1-206ENST00000554353 PITPNM2Q9BZ72 1349 aa6.82□□□□□ -1.32
MTHFD1-206ENST00000554353 TET3O43151 1660 aa6.82□□□□□ -1.32
MTHFD1-206ENST00000554353 STXBP3O00186 592 aa6.82□□□□□ -1.32
MTHFD1-206ENST00000554353 ENPP3O14638 875 aa6.82□□□□□ -1.32
MTHFD1-206ENST00000554353 SNRPB2P08579 225 aaKnown RBP6.82□□□□□ -1.32
MTHFD1-206ENST00000554353 HSD3B2P26439 372 aa6.82□□□□□ -1.32
MTHFD1-206ENST00000554353 PCBP3P57721 371 aaKnown RBP6.82□□□□□ -1.32
MTHFD1-206ENST00000554353 SF1Q15637 639 aaKnown RBP6.82□□□□□ -1.32
MTHFD1-206ENST00000554353 LONRF2Q1L5Z9 754 aa6.82□□□□□ -1.32
MTHFD1-206ENST00000554353 TMEM67Q5HYA8 995 aa6.82□□□□□ -1.32
MTHFD1-206ENST00000554353 NSMFQ6X4W1 530 aa6.82□□□□□ -1.32
MTHFD1-206ENST00000554353 FOXP3Q9BZS1 431 aa6.82□□□□□ -1.32
MTHFD1-206ENST00000554353 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.82□□□□□ -1.32
MTHFD1-206ENST00000554353 ANKRD30BQ9BXX2 1392 aa6.82□□□□□ -1.32
MTHFD1-206ENST00000554353 CHD2O14647 1828 aaKnown RBP6.81□□□□□ -1.32
MTHFD1-206ENST00000554353 TRBV23-1A0A0A0MS06 115 aa6.81□□□□□ -1.32
MTHFD1-206ENST00000554353 FKTNO75072 461 aa6.81□□□□□ -1.32
MTHFD1-206ENST00000554353 GSTM1P09488 218 aa6.81□□□□□ -1.32
MTHFD1-206ENST00000554353 PABPC1P11940 636 aaKnown RBP6.81□□□□□ -1.32
MTHFD1-206ENST00000554353 ECI1P42126 302 aa6.81□□□□□ -1.32
MTHFD1-206ENST00000554353 NOP2P46087 812 aaKnown RBP6.81□□□□□ -1.32
MTHFD1-206ENST00000554353 ZC3H12BQ5HYM0 836 aaKnown RBP6.81□□□□□ -1.32
MTHFD1-206ENST00000554353 NOL8Q76FK4 1167 aaKnown RBP6.81□□□□□ -1.32
MTHFD1-206ENST00000554353 USHBP1Q8N6Y0 703 aa6.81□□□□□ -1.32
MTHFD1-206ENST00000554353 EXOC2Q96KP1 924 aa6.81□□□□□ -1.32
MTHFD1-206ENST00000554353 MCMBPQ9BTE3 642 aa6.81□□□□□ -1.32
MTHFD1-206ENST00000554353 NKX2-4Q9H2Z4 354 aa6.81□□□□□ -1.32
MTHFD1-206ENST00000554353 SLC52A1Q9NWF4 448 aa6.81□□□□□ -1.32
MTHFD1-206ENST00000554353 TCFL5Q9UL49 500 aa6.81□□□□□ -1.32
MTHFD1-206ENST00000554353 PCDHA11Q9Y5I1 949 aa6.81□□□□□ -1.32
MTHFD1-206ENST00000554353 NOS1P29475 1434 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms