RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 DDX49Q9Y6V7 483 aaKnown RBP18.55■□□□□ 0.56
ACTN1-209ENST00000553659 ORC4O43929 436 aa18.54■□□□□ 0.56
ACTN1-209ENST00000553659 BRD1O95696 1058 aa18.54■□□□□ 0.56
ACTN1-209ENST00000553659 FGBP02675 491 aa18.54■□□□□ 0.56
ACTN1-209ENST00000553659 ICAM1P05362 532 aa18.54■□□□□ 0.56
ACTN1-209ENST00000553659 FGRP09769 529 aa18.54■□□□□ 0.56
ACTN1-209ENST00000553659 NSMFQ6X4W1 530 aa18.54■□□□□ 0.56
ACTN1-209ENST00000553659 RASGRP2Q7LDG7 609 aa18.54■□□□□ 0.56
ACTN1-209ENST00000553659 FBXO16Q8IX29 292 aaPredicted RBP18.54■□□□□ 0.56
ACTN1-209ENST00000553659 USP38Q8NB14 1042 aa18.54■□□□□ 0.56
ACTN1-209ENST00000553659 DCAF4Q8WV16 495 aa18.54■□□□□ 0.56
ACTN1-209ENST00000553659 GAS2L1Q99501 681 aaPredicted RBP18.54■□□□□ 0.56
ACTN1-209ENST00000553659 MTIF3Q9H2K0 278 aaKnown RBP18.54■□□□□ 0.56
ACTN1-209ENST00000553659 RANBP17Q9H2T7 1088 aaKnown RBP18.54■□□□□ 0.56
ACTN1-209ENST00000553659 VTA1Q9NP79 307 aa18.54■□□□□ 0.56
ACTN1-209ENST00000553659 SMC3Q9UQE7 1217 aa18.54■□□□□ 0.56
ACTN1-209ENST00000553659 MTMR7Q9Y216 660 aa18.54■□□□□ 0.56
ACTN1-209ENST00000553659 BAG4O95429 457 aaKnown RBP18.53■□□□□ 0.56
ACTN1-209ENST00000553659 CYP21A2P08686 494 aa18.53■□□□□ 0.56
ACTN1-209ENST00000553659 PTGS1P23219 599 aa18.53■□□□□ 0.56
ACTN1-209ENST00000553659 DEKP35659 375 aaKnown RBP18.53■□□□□ 0.56
ACTN1-209ENST00000553659 ALX1Q15699 326 aa18.53■□□□□ 0.56
ACTN1-209ENST00000553659 RAB30Q15771 203 aa18.53■□□□□ 0.56
ACTN1-209ENST00000553659 IMMTQ16891 758 aaKnown RBP18.53■□□□□ 0.56
ACTN1-209ENST00000553659 BTNL9Q6UXG8 535 aa18.53■□□□□ 0.56
ACTN1-209ENST00000553659 MSRAQ9UJ68 235 aa18.53■□□□□ 0.56
ACTN1-209ENST00000553659 BAATQ14032 418 aaPredicted RBP18.52■□□□□ 0.56
ACTN1-209ENST00000553659 CCDC96Q2M329 555 aa18.52■□□□□ 0.56
ACTN1-209ENST00000553659 TMEM63BQ5T3F8 832 aa18.52■□□□□ 0.56
ACTN1-209ENST00000553659 TTBK2Q6IQ55 1244 aa18.52■□□□□ 0.56
ACTN1-209ENST00000553659 PURBQ96QR8 312 aaKnown RBP18.52■□□□□ 0.56
ACTN1-209ENST00000553659 NOC4LQ9BVI4 516 aaKnown RBP18.52■□□□□ 0.56
ACTN1-209ENST00000553659 TRPV6Q9H1D0 765 aa18.52■□□□□ 0.56
ACTN1-209ENST00000553659 PRDM12Q9H4Q4 367 aa18.52■□□□□ 0.56
ACTN1-209ENST00000553659 CXXC1Q9P0U4 656 aaPredicted RBP18.52■□□□□ 0.56
ACTN1-209ENST00000553659 ADD3Q9UEY8 706 aaKnown RBP18.52■□□□□ 0.56
ACTN1-209ENST00000553659 ZMYM6O95789 1325 aa18.51■□□□□ 0.55
ACTN1-209ENST00000553659 UMODL1Q5DID0 1318 aa18.51■□□□□ 0.55
ACTN1-209ENST00000553659 LOC102724159A0A0B4J2E5 919 aa18.51■□□□□ 0.55
ACTN1-209ENST00000553659 TRAK2O60296 914 aa18.51■□□□□ 0.55
ACTN1-209ENST00000553659 B4GALT4O60513 344 aa18.51■□□□□ 0.55
ACTN1-209ENST00000553659 SLC16A2P36021 539 aa18.51■□□□□ 0.55
ACTN1-209ENST00000553659 PSMC6P62333 389 aa18.51■□□□□ 0.55
ACTN1-209ENST00000553659 PWP2Q15269 919 aaKnown RBP18.51■□□□□ 0.55
ACTN1-209ENST00000553659 DUSP28Q4G0W2 176 aa18.51■□□□□ 0.55
ACTN1-209ENST00000553659 TJAP1Q5JTD0 557 aa18.51■□□□□ 0.55
ACTN1-209ENST00000553659 AKNAD1Q5T1N1 836 aa18.51■□□□□ 0.55
ACTN1-209ENST00000553659 DHX32Q7L7V1 743 aaKnown RBP18.51■□□□□ 0.55
ACTN1-209ENST00000553659 RPUSD2Q8IZ73 545 aaKnown RBP18.51■□□□□ 0.55
ACTN1-209ENST00000553659 TCP11L1Q9NUJ3 509 aa18.51■□□□□ 0.55
ACTN1-209ENST00000553659 ATP6V1DQ9Y5K8 247 aa18.51■□□□□ 0.55
ACTN1-209ENST00000553659 TOP1P11387 765 aaKnown RBP18.5■□□□□ 0.55
ACTN1-209ENST00000553659 PDCP20941 246 aa18.5■□□□□ 0.55
ACTN1-209ENST00000553659 ALDH5A1P51649 535 aaPredicted RBP18.5■□□□□ 0.55
ACTN1-209ENST00000553659 CCL23P55773 120 aa18.5■□□□□ 0.55
ACTN1-209ENST00000553659 SYDE2Q5VT97 1194 aa18.5■□□□□ 0.55
ACTN1-209ENST00000553659 OTOP2Q7RTS6 562 aa18.5■□□□□ 0.55
ACTN1-209ENST00000553659 FBXL16Q8N461 479 aa18.5■□□□□ 0.55
ACTN1-209ENST00000553659 TMEM47Q9BQJ4 181 aa18.5■□□□□ 0.55
ACTN1-209ENST00000553659 PRDM6Q9NQX0 595 aa18.5■□□□□ 0.55
ACTN1-209ENST00000553659 TOMM22Q9NS69 142 aa18.5■□□□□ 0.55
ACTN1-209ENST00000553659 WDR19Q8NEZ3 1342 aa18.49■□□□□ 0.55
ACTN1-209ENST00000553659 NFIBO00712 420 aa18.49■□□□□ 0.55
ACTN1-209ENST00000553659 FGAP02671 866 aa18.49■□□□□ 0.55
ACTN1-209ENST00000553659 RRP12Q5JTH9 1297 aaKnown RBP18.49■□□□□ 0.55
ACTN1-209ENST00000553659 PPM1EQ8WY54 764 aa18.49■□□□□ 0.55
ACTN1-209ENST00000553659 WDR11Q9BZH6 1224 aa18.49■□□□□ 0.55
ACTN1-209ENST00000553659 WNT8AQ9H1J5 351 aa18.49■□□□□ 0.55
ACTN1-209ENST00000553659 NKX2-4Q9H2Z4 354 aa18.49■□□□□ 0.55
ACTN1-209ENST00000553659 SLC28A3Q9HAS3 691 aa18.49■□□□□ 0.55
ACTN1-209ENST00000553659 POLR3EQ9NVU0 708 aa18.49■□□□□ 0.55
ACTN1-209ENST00000553659 PNMA2Q9UL42 364 aa18.49■□□□□ 0.55
ACTN1-209ENST00000553659 SCN5AQ14524 2016 aa18.49■□□□□ 0.55
ACTN1-209ENST00000553659 SCN10AQ9Y5Y9 1956 aa18.48■□□□□ 0.55
ACTN1-209ENST00000553659 VCANP13611 3396 aa18.48■□□□□ 0.55
ACTN1-209ENST00000553659 RBM47A0AV96 593 aaKnown RBP18.48■□□□□ 0.55
ACTN1-209ENST00000553659 PTPDC1A2A3K4 754 aa18.48■□□□□ 0.55
ACTN1-209ENST00000553659 SUPT20HL2P0C7V6 817 aa18.48■□□□□ 0.55
ACTN1-209ENST00000553659 CPA1P15085 419 aa18.48■□□□□ 0.55
ACTN1-209ENST00000553659 ATXN2LQ8WWM7 1075 aaKnown RBP18.48■□□□□ 0.55
ACTN1-209ENST00000553659 GPCPD1Q9NPB8 672 aa18.48■□□□□ 0.55
ACTN1-209ENST00000553659 FRMPD2Q68DX3 1309 aaPredicted RBP18.48■□□□□ 0.55
ACTN1-209ENST00000553659 E7EWF7 191 aa18.47■□□□□ 0.55
ACTN1-209ENST00000553659 PDHBP11177 359 aa18.47■□□□□ 0.55
ACTN1-209ENST00000553659 CPT1AP50416 773 aa18.47■□□□□ 0.55
ACTN1-209ENST00000553659 FGD1P98174 961 aa18.47■□□□□ 0.55
ACTN1-209ENST00000553659 PURAQ00577 322 aaKnown RBP18.47■□□□□ 0.55
ACTN1-209ENST00000553659 ADGRE1Q14246 886 aa18.47■□□□□ 0.55
ACTN1-209ENST00000553659 ME3Q16798 604 aa18.47■□□□□ 0.55
ACTN1-209ENST00000553659 CLEC4DQ8WXI8 215 aa18.47■□□□□ 0.55
ACTN1-209ENST00000553659 AGXT2Q9BYV1 514 aa18.47■□□□□ 0.55
ACTN1-209ENST00000553659 TPCN1Q9ULQ1 816 aa18.47■□□□□ 0.55
ACTN1-209ENST00000553659 YBX2Q9Y2T7 364 aaKnown RBP18.47■□□□□ 0.55
ACTN1-209ENST00000553659 ZDHHC9Q9Y397 364 aa18.47■□□□□ 0.55
ACTN1-209ENST00000553659 SLC4A7Q9Y6M7 1214 aa18.47■□□□□ 0.55
ACTN1-209ENST00000553659 TRIP12Q14669 1992 aaPredicted RBP18.46■□□□□ 0.55
ACTN1-209ENST00000553659 ZNF213O14771 459 aa18.46■□□□□ 0.55
ACTN1-209ENST00000553659 CALML3P27482 149 aa18.46■□□□□ 0.55
ACTN1-209ENST00000553659 TOB2Q14106 344 aaPredicted RBP18.46■□□□□ 0.55
ACTN1-209ENST00000553659 RNF207Q6ZRF8 634 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms