RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 GNALP38405 381 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 CHRNA4P43681 627 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 LSSP48449 732 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 SEPHS1P49903 392 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 PAK1Q13153 545 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 CLEC16AQ2KHT3 1053 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 KIZQ2M2Z5 673 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 TMEM177Q53S58 311 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 CREB3L3Q68CJ9 461 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 MBLAC2Q68D91 279 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 CCSAPQ6IQ19 270 aaPredicted RBP5.18□□□□□ -1.58
TDP1-207ENST00000553617 FKBP9P1Q75LS8 142 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 OVCH1Q7RTY7 1134 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 TSPYL5Q86VY4 417 aaPredicted RBP5.18□□□□□ -1.58
TDP1-207ENST00000553617 KSR1Q8IVT5 923 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 WDR75Q8IWA0 830 aaKnown RBP5.18□□□□□ -1.58
TDP1-207ENST00000553617 ZC3H7AQ8IWR0 971 aaKnown RBP5.18□□□□□ -1.58
TDP1-207ENST00000553617 SHISA5Q8N114 240 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 CBARPQ8N350 705 aaPredicted RBP5.18□□□□□ -1.58
TDP1-207ENST00000553617 CHST14Q8NCH0 376 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 LINC00116Q8NCU8 138 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 HOOK2Q96ED9 719 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 CCDC136Q96JN2 1154 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 POLR3GLQ9BT43 218 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 CDIP1Q9H305 208 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 EMC7Q9NPA0 242 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 ZIM2Q9NZV7 527 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 U3KQE9 123 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 ABLIM3O94929 683 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 FBXO21O94952 628 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 FURINP09958 794 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 ATP2A2P16615 1042 aaKnown RBP5.17□□□□□ -1.58
TDP1-207ENST00000553617 PAMP19021 973 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 IL2P60568 153 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 ERVK-21P61565 698 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 NKPD1Q17RQ9 610 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 INF2Q27J81 1249 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 GAB4Q2WGN9 574 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 INAVAQ3KP66 663 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 CYP27C1Q4G0S4 372 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 NXNQ6DKJ4 435 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 ZBTB46Q86UZ6 589 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 PASD1Q8IV76 773 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 Q8N3U1 123 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 TBC1D32Q96NH3 1257 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 ALG1Q9BT22 464 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 PCGF6Q9BYE7 350 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 KRTAP4-8Q9BYQ9 185 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 TRIT1Q9H3H1 467 aaKnown RBP5.17□□□□□ -1.58
TDP1-207ENST00000553617 GPATCH2Q9NW75 528 aa5.17□□□□□ -1.58
TDP1-207ENST00000553617 TRBV23OR9-2A0A075B6M9 112 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 GNAT3A8MTJ3 354 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 GAS7O60861 476 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 RFPL1O75677 317 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 SOD2P04179 222 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 SYPP08247 313 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 GSTM1P09488 218 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 OXCT1P55809 520 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 SART3Q15020 963 aaKnown RBP5.16□□□□□ -1.58
TDP1-207ENST00000553617 ATP13A4Q4VNC1 1196 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 FAM102BQ5T8I3 360 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 C16orf59Q7L2K0 433 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 ZNF765Q7L2R6 523 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 OTOP1Q7RTM1 612 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 CERS3Q8IU89 383 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 CCAR1Q8IX12 1150 aaKnown RBP5.16□□□□□ -1.58
TDP1-207ENST00000553617 TCEAL8Q8IYN2 117 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 CHPFQ8IZ52 775 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 MYO1HQ8N1T3 1032 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 CHTF18Q8WVB6 975 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 PTCHD1Q96NR3 888 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 RHOBTB2Q9BYZ6 727 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 C7orf69Q9H7B7 122 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 IPPKQ9H8X2 491 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 MKNK2Q9HBH9 465 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 CABP5Q9NP86 173 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 SPTLC3Q9NUV7 552 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 THG1LQ9NWX6 298 aaKnown RBP5.16□□□□□ -1.58
TDP1-207ENST00000553617 FBXL7Q9UJT9 491 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 ZKSCAN5Q9Y2L8 839 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 RIPOR2Q9Y4F9 1068 aa5.16□□□□□ -1.58
TDP1-207ENST00000553617 NPHP3-ACAD11A0A0J9YXS1 232 aa5.15□□□□□ -1.59
TDP1-207ENST00000553617 HMX2A2RU54 273 aa5.15□□□□□ -1.59
TDP1-207ENST00000553617 CCDC66A2RUB6 948 aa5.15□□□□□ -1.59
TDP1-207ENST00000553617 PLEKHD1A6NEE1 506 aa5.15□□□□□ -1.59
TDP1-207ENST00000553617 FAM170BA6NMN3 283 aa5.15□□□□□ -1.59
TDP1-207ENST00000553617 WASH4PA8MWX3 477 aa5.15□□□□□ -1.59
TDP1-207ENST00000553617 FZD9O00144 591 aa5.15□□□□□ -1.59
TDP1-207ENST00000553617 TPD52L2O43399 206 aaKnown RBP5.15□□□□□ -1.59
TDP1-207ENST00000553617 ULK1O75385 1050 aa5.15□□□□□ -1.59
TDP1-207ENST00000553617 SRGAP2CP0DJJ0 459 aa5.15□□□□□ -1.59
TDP1-207ENST00000553617 GRK2P25098 689 aa5.15□□□□□ -1.59
TDP1-207ENST00000553617 GRK3P35626 688 aa5.15□□□□□ -1.59
TDP1-207ENST00000553617 CEBPAP49715 358 aaPredicted RBP5.15□□□□□ -1.59
TDP1-207ENST00000553617 PCBP3P57721 371 aaKnown RBP5.15□□□□□ -1.59
TDP1-207ENST00000553617 OCRLQ01968 901 aa5.15□□□□□ -1.59
TDP1-207ENST00000553617 FAM47CQ5HY64 1035 aa5.15□□□□□ -1.59
TDP1-207ENST00000553617 RNF111Q6ZNA4 994 aa5.15□□□□□ -1.59
TDP1-207ENST00000553617 C14orf80Q86SX3 495 aa5.15□□□□□ -1.59
TDP1-207ENST00000553617 SPACA3Q8IXA5 215 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms