RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 KIAA0355O15063 1070 aa21.19■□□□□ 0.98
SHMT2-206ENST00000553529 CPA1P15085 419 aa21.19■□□□□ 0.98
SHMT2-206ENST00000553529 LY6KQ17RY6 165 aa21.19■□□□□ 0.98
SHMT2-206ENST00000553529 OR6J1Q8NGC5 347 aa21.19■□□□□ 0.98
SHMT2-206ENST00000553529 AMNQ9BXJ7 453 aa21.19■□□□□ 0.98
SHMT2-206ENST00000553529 TRPV6Q9H1D0 765 aa21.19■□□□□ 0.98
SHMT2-206ENST00000553529 PCDHA1Q9Y5I3 950 aa21.19■□□□□ 0.98
SHMT2-206ENST00000553529 MYL3P08590 195 aa21.18■□□□□ 0.98
SHMT2-206ENST00000553529 GPKOWQ92917 476 aaPredicted RBP eCLIP21.18■□□□□ 0.98
SHMT2-206ENST00000553529 RMDN3Q96TC7 470 aa21.18■□□□□ 0.98
SHMT2-206ENST00000553529 MRPL11Q9Y3B7 192 aaKnown RBP21.18■□□□□ 0.98
SHMT2-206ENST00000553529 ELP1O95163 1332 aa21.18■□□□□ 0.98
SHMT2-206ENST00000553529 KIAA1217Q5T5P2 1943 aa21.17■□□□□ 0.98
SHMT2-206ENST00000553529 TXNP10599 105 aaKnown RBP21.17■□□□□ 0.98
SHMT2-206ENST00000553529 RAG1P15918 1043 aa21.17■□□□□ 0.98
SHMT2-206ENST00000553529 HSD17B4P51659 736 aa21.17■□□□□ 0.98
SHMT2-206ENST00000553529 ITGA7Q13683 1181 aa21.17■□□□□ 0.98
SHMT2-206ENST00000553529 LRIT3Q3SXY7 679 aa21.17■□□□□ 0.98
SHMT2-206ENST00000553529 CATIPQ7Z7H3 387 aa21.17■□□□□ 0.98
SHMT2-206ENST00000553529 SRBD1Q8N5C6 995 aaKnown RBP21.17■□□□□ 0.98
SHMT2-206ENST00000553529 RGS22Q8NE09 1264 aa21.17■□□□□ 0.98
SHMT2-206ENST00000553529 DNERQ8NFT8 737 aa21.17■□□□□ 0.98
SHMT2-206ENST00000553529 PXMP2Q9NR77 195 aa21.17■□□□□ 0.98
SHMT2-206ENST00000553529 DCDC2CA8MYV0 355 aa21.16■□□□□ 0.98
SHMT2-206ENST00000553529 B4GALT4O60513 344 aa21.16■□□□□ 0.98
SHMT2-206ENST00000553529 CDC45O75419 566 aa21.16■□□□□ 0.98
SHMT2-206ENST00000553529 RGS20O76081 388 aa21.16■□□□□ 0.98
SHMT2-206ENST00000553529 CD4P01730 458 aa21.16■□□□□ 0.98
SHMT2-206ENST00000553529 ACRP10323 421 aa21.16■□□□□ 0.98
SHMT2-206ENST00000553529 CYP2C18P33260 490 aa21.16■□□□□ 0.98
SHMT2-206ENST00000553529 PPP2R5BQ15173 497 aa21.16■□□□□ 0.98
SHMT2-206ENST00000553529 NFXL1Q6ZNB6 911 aa21.16■□□□□ 0.98
SHMT2-206ENST00000553529 CCDC82Q8N4S0 544 aa21.16■□□□□ 0.98
SHMT2-206ENST00000553529 SLC43A3Q8NBI5 491 aa21.16■□□□□ 0.98
SHMT2-206ENST00000553529 BCAS3Q9H6U6 928 aa21.16■□□□□ 0.98
SHMT2-206ENST00000553529 MYCLP12524 364 aaPredicted RBP21.15■□□□□ 0.98
SHMT2-206ENST00000553529 MCM5P33992 734 aa21.15■□□□□ 0.98
SHMT2-206ENST00000553529 PURAQ00577 322 aaKnown RBP21.15■□□□□ 0.98
SHMT2-206ENST00000553529 SART3Q15020 963 aaKnown RBP21.15■□□□□ 0.98
SHMT2-206ENST00000553529 ARHGEF16Q5VV41 709 aa21.15■□□□□ 0.98
SHMT2-206ENST00000553529 CCDC62Q6P9F0 684 aa21.15■□□□□ 0.98
SHMT2-206ENST00000553529 CASC1Q6TDU7 716 aa21.15■□□□□ 0.98
SHMT2-206ENST00000553529 C16orf59Q7L2K0 433 aa21.15■□□□□ 0.98
SHMT2-206ENST00000553529 FCHSD1Q86WN1 690 aa21.15■□□□□ 0.98
SHMT2-206ENST00000553529 FAM161BQ96MY7 647 aa21.15■□□□□ 0.98
SHMT2-206ENST00000553529 TOX2Q96NM4 488 aa21.15■□□□□ 0.98
SHMT2-206ENST00000553529 TRMT13Q9NUP7 481 aaKnown RBP21.15■□□□□ 0.98
SHMT2-206ENST00000553529 CSF2RAP15509 400 aa21.14■□□□□ 0.97
SHMT2-206ENST00000553529 CHMP4BP1P59074 171 aa21.14■□□□□ 0.97
SHMT2-206ENST00000553529 FAM109BQ6ICB4 259 aaPredicted RBP21.14■□□□□ 0.97
SHMT2-206ENST00000553529 MCF2L2Q86YR7 1114 aa21.14■□□□□ 0.97
SHMT2-206ENST00000553529 NSUN6Q8TEA1 469 aaKnown RBP21.14■□□□□ 0.97
SHMT2-206ENST00000553529 AFG1LQ8WV93 481 aa21.14■□□□□ 0.97
SHMT2-206ENST00000553529 PNMA2Q9UL42 364 aa21.14■□□□□ 0.97
SHMT2-206ENST00000553529 BRPF3Q9ULD4 1205 aa21.14■□□□□ 0.97
SHMT2-206ENST00000553529 Q9Y3F1 56 aa21.14■□□□□ 0.97
SHMT2-206ENST00000553529 TELO2Q9Y4R8 837 aa21.14■□□□□ 0.97
SHMT2-206ENST00000553529 LAMA2P24043 3122 aaKnown RBP21.13■□□□□ 0.97
SHMT2-206ENST00000553529 PNMA6FA0A0J9YX94 578 aa21.13■□□□□ 0.97
SHMT2-206ENST00000553529 TIMP1P01033 207 aa21.13■□□□□ 0.97
SHMT2-206ENST00000553529 NR3C2P08235 984 aa21.13■□□□□ 0.97
SHMT2-206ENST00000553529 CYP2C9P11712 490 aa21.13■□□□□ 0.97
SHMT2-206ENST00000553529 ARHGAP1Q07960 439 aa21.13■□□□□ 0.97
SHMT2-206ENST00000553529 SCFD2Q8WU76 684 aa21.13■□□□□ 0.97
SHMT2-206ENST00000553529 PDCD2LQ9BRP1 358 aa21.13■□□□□ 0.97
SHMT2-206ENST00000553529 DOCK5Q9H7D0 1870 aa21.13■□□□□ 0.97
SHMT2-206ENST00000553529 CCDC69A6NI79 296 aa21.12■□□□□ 0.97
SHMT2-206ENST00000553529 DDAH1O94760 285 aa21.12■□□□□ 0.97
SHMT2-206ENST00000553529 CCL23P55773 120 aa21.12■□□□□ 0.97
SHMT2-206ENST00000553529 GHRHRQ02643 423 aa21.12■□□□□ 0.97
SHMT2-206ENST00000553529 FPGSQ05932 587 aa21.12■□□□□ 0.97
SHMT2-206ENST00000553529 PGM5Q15124 567 aa21.12■□□□□ 0.97
SHMT2-206ENST00000553529 USP17L6PQ6QN14 398 aa21.12■□□□□ 0.97
SHMT2-206ENST00000553529 MICU3Q86XE3 530 aa21.12■□□□□ 0.97
SHMT2-206ENST00000553529 DEFB123Q8N688 67 aa21.12■□□□□ 0.97
SHMT2-206ENST00000553529 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.12■□□□□ 0.973e-9■□□□□ 10
SHMT2-206ENST00000553529 SCN10AQ9Y5Y9 1956 aa21.11■□□□□ 0.97
SHMT2-206ENST00000553529 LOC102724159A0A0B4J2E5 919 aa21.11■□□□□ 0.97
SHMT2-206ENST00000553529 EXOSC10Q01780 885 aaKnown RBP21.11■□□□□ 0.97
SHMT2-206ENST00000553529 SP2Q02086 613 aa21.11■□□□□ 0.97
SHMT2-206ENST00000553529 TTLL4Q14679 1199 aa21.11■□□□□ 0.97
SHMT2-206ENST00000553529 PWP2Q15269 919 aaKnown RBP21.11■□□□□ 0.97
SHMT2-206ENST00000553529 STXBP2Q15833 593 aa21.11■□□□□ 0.97
SHMT2-206ENST00000553529 CTCFLQ8NI51 663 aaPredicted RBP21.11■□□□□ 0.97
SHMT2-206ENST00000553529 VWCEQ96DN2 955 aa21.11■□□□□ 0.97
SHMT2-206ENST00000553529 NEK1Q96PY6 1258 aa21.11■□□□□ 0.97
SHMT2-206ENST00000553529 WNT8AQ9H1J5 351 aa21.11■□□□□ 0.97
SHMT2-206ENST00000553529 DDX41Q9UJV9 622 aaKnown RBP21.11■□□□□ 0.97
SHMT2-206ENST00000553529 MMP3P08254 477 aa21.1■□□□□ 0.97
SHMT2-206ENST00000553529 NBPF20Q3BBV1 942 aa21.1■□□□□ 0.97
SHMT2-206ENST00000553529 SCLYQ96I15 445 aa21.1■□□□□ 0.97
SHMT2-206ENST00000553529 TMEM87BQ96K49 555 aa21.1■□□□□ 0.97
SHMT2-206ENST00000553529 SPZ1Q9BXG8 430 aa21.1■□□□□ 0.97
SHMT2-206ENST00000553529 ALDH8A1Q9H2A2 487 aaPredicted RBP21.1■□□□□ 0.97
SHMT2-206ENST00000553529 SCN5AQ14524 2016 aa21.1■□□□□ 0.97
SHMT2-206ENST00000553529 MYH7BA7E2Y1 1941 aa21.1■□□□□ 0.97
SHMT2-206ENST00000553529 MROH7Q68CQ1 1323 aa21.09■□□□□ 0.97
SHMT2-206ENST00000553529 A6NJR5 290 aa21.09■□□□□ 0.97
SHMT2-206ENST00000553529 GRXCR1A8MXD5 290 aa21.09■□□□□ 0.97
SHMT2-206ENST00000553529 GCOM1H8Y6P7 765 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms